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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:174.1 nTPM
GTEx:174.1 nTPM
FANTOM5:516.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008445Antibody CAB016200Antibody CAB021109Antibody CAB047350
Squamous epithelial cells LowMediumNot detectedLow






VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

174.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 174.1
Samples: 156

Max nTPM: 338.3
Min nTPM: 87.0
Std nTPM: 48.9
Median nTPM: 164.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 338.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 298.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 289.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 280.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 276.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 270.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 268.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 260.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 258.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 257.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 257.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 255.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 252.4
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 247.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 244.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 242.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 239.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 238.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 237.3
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 236.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 236.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 230.6
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 229.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 228.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 228.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 227.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 227.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 225.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 222.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 219.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 218.8
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 218.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 214.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 213.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 212.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 211.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 211.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 206.5
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 205.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 205.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 203.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 203.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 203.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 203.3
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 203.3
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 202.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 200.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 200.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 200.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 199.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 198.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 196.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 193.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 191.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 189.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 189.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 189.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 188.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 186.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 185.6
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 184.9
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 179.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 179.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 177.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 176.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 176.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 174.0
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 172.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 172.3
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 170.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 170.1
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 169.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 168.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 167.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 165.8
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 165.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 165.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 164.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 164.5
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 162.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 162.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 160.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 159.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 159.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 159.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 158.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 157.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 157.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 157.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 157.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 156.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 156.2
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 154.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 153.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 152.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 152.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 151.4
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 150.4
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 149.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 149.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 148.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 148.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 148.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 148.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 147.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 146.5
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 145.2
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 144.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 144.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 141.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 141.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 141.3
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 140.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 139.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 138.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 137.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 136.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 135.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 134.0
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 133.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 131.6
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 131.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 130.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 129.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 129.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 128.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 127.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 127.2
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 126.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 126.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 124.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 124.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 124.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 123.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 123.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 120.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 119.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 118.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 117.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 117.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 116.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 114.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 114.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 114.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 113.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 111.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 111.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 109.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 108.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 106.7
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 106.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 105.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 101.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 95.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 90.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 87.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

516.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 516.8
FF:10204-103F6 68 years, female 516.8

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