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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
221.2
nTPM
FANTOM5:
256.5
Scaled Tags Per Million
Pig:
158.2
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
221.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 182.1
1984
Male, age 76, both hemispheres
235.2
2301
Female, age 85, both hemispheres
204.1
2090
Male, age 80, both hemispheres
148.6
2188
Female, age 91, both hemispheres
140.7
Dorsal cochlear nucleus nTPM: 170.8
2187
Female, age 91, both hemispheres
183.2
2370
Male, age 61, both hemispheres
179.2
2802
Male, age 74, right hemisphere
171.3
2058
Male, age 76, both hemispheres
169.9
2378
Male, age 80, both hemispheres
150.2
Dorsal tegmental nucleus nTPM: 169.5
2083
Male, age 80, both hemispheres
185.1
2358
Male, age 61, both hemispheres
169.0
1936
Male, age 76, left hemisphere
165.9
2326
Male, age 74, both hemispheres
157.8
Dorsolateral tegmental area nTPM: 157.5
2141
Male, age 76, both hemispheres
213.7
2654
Male, age 80, both hemispheres
172.4
2751
Female, age 85, both hemispheres
168.7
2360
Male, age 74, both hemispheres
133.9
2337
Male, age 61, both hemispheres
98.7
Kolliker-Fuse nucleus nTPM: 158.6
2163
Male, age 80, both hemispheres
182.2
2793
Female, age 91, left hemisphere
177.3
2315
Male, age 76, right hemisphere
116.3
Lateral lemniscal nuclei nTPM: 196.6
2169
Male, age 76, both hemispheres
221.8
2453
Male, age 74, right hemisphere
215.9
2320
Female, age 91, left hemisphere
191.4
2746
Female, age 85, left hemisphere
184.7
2036
Male, age 80, both hemispheres
169.2
Lateral parabrachial nucleus nTPM: 149.4
2139
Female, age 85, right hemisphere
189.4
2013
Male, age 80, both hemispheres
146.9
2790
Male, age 61, both hemispheres
141.8
2792
Male, age 76, both hemispheres
119.5
Lateral vestibular nucleus nTPM: 193.3
2184
Male, age 76, both hemispheres
204.7
2311
Male, age 80, both hemispheres
181.9
Locus coeruleus nTPM: 221.2
2014
Male, age 55, unknown
241.9
2720
Male, age 74, both hemispheres
239.1
2317
Female, age 72, unknown
234.3
2162
Male, age 80, both hemispheres
226.4
1980
Male, age 76, both hemispheres
217.3
2123
Female, age 91, both hemispheres
211.7
2788
Male, age 74, unknown
177.6
Medial parabrachial nucleus nTPM: 188.2
2463
Female, age 85, right hemisphere
223.3
2786
Male, age 76, both hemispheres
189.9
2156
Male, age 61, both hemispheres
188.7
2170
Female, age 91, both hemispheres
182.1
2854
Male, age 80, both hemispheres
156.8
Medial periolivary nuclei nTPM: 186.8
2171
Female, age 85, both hemispheres
255.7
2063
Male, age 76, both hemispheres
201.9
2458
Female, age 91, both hemispheres
174.4
2791
Male, age 74, right hemisphere
165.3
2081
Male, age 80, both hemispheres
136.7
Motor facial nucleus nTPM: 201.3
2327
Male, age 80, both hemispheres
232.1
2062
Male, age 76, both hemispheres
219.3
2795
Female, age 91, both hemispheres
201.5
2365
Male, age 74, right hemisphere
198.8
2697
Female, age 85, both hemispheres
194.9
2126
Male, age 61, both hemispheres
161.4
Motor trigeminal nucleus nTPM: 185.0
2560
Male, age 74, both hemispheres
205.3
2335
Male, age 61, both hemispheres
195.5
2309
Male, age 76, both hemispheres
184.6
2321
Female, age 91, both hemispheres
179.5
2079
Male, age 80, both hemispheres
159.9
Nuclei of the trapezoid body nTPM: 204.2
2735
Female, age 85, both hemispheres
236.8
2368
Female, age 91, both hemispheres
201.9
1983
Male, age 76, both hemispheres
198.9
2159
Male, age 61, both hemispheres
195.2
2166
Male, age 80, both hemispheres
188.0
Nucleus raphe magnus nTPM: 207.0
2172
Female, age 85, both hemispheres
270.5
2455
Male, age 74, both hemispheres
231.5
2328
Male, age 80, both hemispheres
215.5
2051
Male, age 76, both hemispheres
176.7
2459
Female, age 91, both hemispheres
175.4
2160
Male, age 61, both hemispheres
172.6
Paramedian reticular nucleus nTPM: 165.6
2313
Male, age 61, both hemispheres
208.4
2050
Female, age 85, both hemispheres
181.5
2057
Male, age 80, both hemispheres
172.1
2052
Male, age 76, both hemispheres
100.2
Pedunculopontine tegmental nucleus nTPM: 174.5
1921
Female, age 85, both hemispheres
211.0
2334
Male, age 80, both hemispheres
183.8
2338
Male, age 61, both hemispheres
128.7
Pontine nuclei nTPM: 181.0
2787
Female, age 85, both hemispheres
259.7
1968
Male, age 76, left hemisphere
203.9
1863
Male, age 55, unknown
181.2
2109
Female, age 72, unknown
180.0
2454
Male, age 74, left hemisphere
177.6
2115
Male, age 80, left hemisphere
163.7
2319
Female, age 91, both hemispheres
156.8
2727
Male, age 61, right hemisphere
125.6
Pontine raphe nucleus nTPM: 200.3
2853
Male, age 76, midline
212.5
2122
Female, age 85, midline
188.0
Posteroventral cochlear nucleus nTPM: 146.5
2752
Female, age 85, both hemispheres
182.8
2070
Male, age 76, both hemispheres
179.6
2371
Male, age 61, both hemispheres
159.1
2135
Female, age 91, both hemispheres
107.7
2341
Male, age 80, both hemispheres
103.2
Principal sensory trigeminal nucleus nTPM: 179.3
2324
Male, age 76, both hemispheres
206.1
2158
Male, age 61, both hemispheres
185.5
2367
Female, age 91, left hemisphere
169.2
2008
Male, age 80, left hemisphere
156.4
Reticular pontine nucleus, caudal nTPM: 190.8
2332
Male, age 80, right hemisphere
231.1
2559
Male, age 74, both hemispheres
179.6
2457
Female, age 91, both hemispheres
179.5
2092
Male, age 76, both hemispheres
172.9
Reticular pontine nucleus, oral nTPM: 181.3
2361
Male, age 74, both hemispheres
214.8
2167
Male, age 76, both hemispheres
193.6
2366
Female, age 91, both hemispheres
170.1
2012
Female, age 85, both hemispheres
169.6
1939
Male, age 80, both hemispheres
158.4
Reticulotegmental nucleus nTPM: 197.2
2452
Male, age 74, both hemispheres
211.3
2325
Male, age 76, both hemispheres
201.5
2333
Male, age 80, both hemispheres
196.7
2322
Female, age 91, both hemispheres
179.2
Spinal trigeminal nucleus, oral nTPM: 208.2
1978
Male, age 76, both hemispheres
219.3
2737
Female, age 85, both hemispheres
204.8
2164
Male, age 80, both hemispheres
200.5
Subcoeruleus area nTPM: 191.2
2323
Female, age 91, left hemisphere
230.3
2451
Male, age 74, both hemispheres
213.7
2089
Male, age 76, left hemisphere
200.9
1958
Male, age 80, both hemispheres
165.6
2369
Female, age 85, left hemisphere
145.7
Superior olive nTPM: 188.3
2329
Male, age 80, right hemisphere
214.3
2561
Female, age 91, both hemispheres
192.4
2364
Male, age 74, right hemisphere
187.3
1875
Female, age 85, both hemispheres
173.9
2020
Male, age 76, both hemispheres
173.7
Ventral periolivary nuclei nTPM: 192.3
2130
Female, age 85, both hemispheres
240.1
2165
Male, age 80, both hemispheres
214.6
2794
Female, age 91, left hemisphere
174.3
2023
Male, age 76, both hemispheres
140.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 181.5
2449
Male, age 74, both hemispheres
218.8
2161
Male, age 80, both hemispheres
186.9
2456
Female, age 91, both hemispheres
182.8
1959
Male, age 76, both hemispheres
173.5
2840
Female, age 85, both hemispheres
172.5
2359
Male, age 61, both hemispheres
154.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
