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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1003.1 nTPM
HPA Brain:504.9 nTPM
GTEx:1003.1 nTPM
FANTOM5:533.9 Scaled Tags Per Million
Pig:378.3 nTPM
Mouse:898.5 nTPM
Allen mouse:3.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006124
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

504.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 303.7
2846 Female, age 79, unknown 450.4
1781 Male, age 74, unknown 330.7
1854 Male, age 80, left hemisphere 325.8
2290 Female, age 72, unknown 320.4
1857 Female, age 85, left hemisphere 315.2
2481 Female, age 94, left hemisphere 289.4
2288 Male, age 75, left hemisphere 220.9
2289 Male, age 61, right hemisphere 177.0
Globus pallidus, externus
nTPM: 504.9
2772 Female, age 79, unknown 602.2
1996 Male, age 80, right hemisphere 581.7
2395 Male, age 75, both hemispheres 486.6
2567 Female, age 72, unknown 444.0
2646 Male, age 61, right hemisphere 409.9
Globus pallidus, internus
nTPM: 471.0
2483 Female, age 94, right hemisphere 571.3
2287 Male, age 75, right hemisphere 520.5
2037 Male, age 80, right hemisphere 492.1
2778 Female, age 91, both hemispheres 468.5
2566 Female, age 72, unknown 466.7
1818 Male, age 74, unknown 389.5
2111 Female, age 85, right hemisphere 388.3
Nucleus accumbens
nTPM: 328.7
1783 Male, age 74, unknown 390.2
2698 Female, age 72, unknown 376.1
2391 Female, age 94, left hemisphere 369.2
1806 Female, age 85, left hemisphere 348.8
2732 Male, age 80, right hemisphere 324.1
1856 Female, age 91, right hemisphere 321.0
2286 Male, age 75, left hemisphere 267.5
2824 Male, age 61, right hemisphere 232.5
Nucleus basalis of Meynert
nTPM: 367.1
2569 Male, age 61, both hemispheres 474.8
2821 Male, age 75, both hemispheres 352.9
2484 Female, age 94, left hemisphere 329.1
2393 Male, age 80, right hemisphere 311.8
Nucleus of the diagonal band
nTPM: 257.5
1812 Female, age 91, both hemispheres 326.4
1979 Male, age 74, unknown 301.8
2775 Male, age 80, right hemisphere 267.1
2195 Female, age 85, both hemispheres 226.9
2029 Male, age 61, right hemisphere 165.2
Putamen
nTPM: 297.4
2466 Female, age 79, unknown 376.8
2482 Female, age 94, left hemisphere 300.1
1937 Female, age 91, right hemisphere 291.4
1838 Male, age 80, right hemisphere 284.8
2647 Male, age 75, left hemisphere 284.2
1829 Male, age 74, unknown 277.9
2489 Female, age 72, unknown 266.5
Septal nuclei
nTPM: 275.9
2199 Male, age 80, right hemisphere 343.4
2394 Male, age 61, left hemisphere 314.8
2031 Female, age 72, unknown 278.7
1960 Male, age 74, unknown 269.9
2059 Female, age 85, both hemispheres 253.6
2009 Female, age 91, both hemispheres 238.2
2629 Female, age 94, right hemisphere 233.0
Stria terminalis, bed nucleus
nTPM: 211.7
1974 Female, age 91, both hemispheres 275.2
2201 Male, age 74, unknown 197.0
2486 Female, age 94, both hemispheres 163.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1003.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 799.6
Samples: 246

Max nTPM: 2333.1
Min nTPM: 328.0
Std nTPM: 279.1
Median nTPM: 734.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2333.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2113.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1935.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1705.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1700.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1534.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1509.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1502.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1493.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1377.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1350.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1349.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1336.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1273.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1240.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1206.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1174.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1160.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1154.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1152.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1120.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1090.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1087.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1077.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1077.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1077.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1070.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1070.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1064.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1055.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1041.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1040.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1036.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1035.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1031.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1028.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1021.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1017.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1011.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1010.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1004.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1000.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 992.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 991.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 987.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 987.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 986.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 983.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 978.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 978.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 976.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 973.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 972.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 970.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 960.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 959.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 957.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 952.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 952.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 945.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 941.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 939.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 939.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 936.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 935.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 932.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 928.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 925.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 918.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 912.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 891.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 890.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 884.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 881.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 879.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 875.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 874.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 868.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 865.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 863.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 862.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 856.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 850.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 845.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 843.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 838.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 835.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 830.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 827.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 826.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 822.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 809.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 808.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 808.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 802.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 800.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 794.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 793.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 793.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 793.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 791.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 791.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 785.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 785.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 785.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 783.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 782.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 781.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 781.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 772.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 772.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 772.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 769.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 766.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 761.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 758.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 756.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 745.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 739.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 736.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 736.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 735.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 734.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 734.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 733.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 730.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 729.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 729.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 727.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 725.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 725.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 723.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 721.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 713.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 711.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 711.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 709.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 708.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 704.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 703.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 701.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 701.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 699.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 698.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 698.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 695.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 695.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 694.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 693.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 693.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 691.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 686.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 684.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 682.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 678.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 676.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 675.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 667.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 664.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 660.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 654.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 653.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 653.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 649.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 646.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 646.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 646.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 643.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 641.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 640.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 640.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 639.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 638.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 633.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 632.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 632.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 631.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 631.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 627.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 627.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 624.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 622.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 619.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 618.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 616.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 614.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 609.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 607.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 602.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 601.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 599.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 598.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 594.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 593.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 592.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 589.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 588.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 587.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 586.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 585.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 585.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 581.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 578.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 571.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 568.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 567.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 567.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 566.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 560.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 557.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 554.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 544.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 544.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 543.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 538.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 536.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 532.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 527.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 526.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 525.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 524.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 524.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 518.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 518.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 513.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 511.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 511.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 506.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 506.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 504.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 502.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 498.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 486.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 484.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 483.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 480.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 465.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 464.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 463.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 462.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 459.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 451.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 433.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 421.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 415.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 328.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1003.1
Samples: 246

Max nTPM: 3903.0
Min nTPM: 358.1
Std nTPM: 424.7
Median nTPM: 919.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 3903.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3308.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2891.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 2493.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 2417.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 2146.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 2095.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1934.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1830.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1765.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1746.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1728.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1722.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1713.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1688.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1610.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1598.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1590.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1562.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1544.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1523.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1512.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1480.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1477.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1467.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1427.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1405.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1386.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1382.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1371.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1341.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1339.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1320.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1320.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1317.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1304.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1276.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1271.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1245.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1242.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1237.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1218.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1217.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1216.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1202.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1195.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1193.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1192.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1189.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1188.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1187.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1185.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1184.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1148.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1141.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1139.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1136.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1132.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1129.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1127.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1125.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1120.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1116.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1112.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1111.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 1110.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1102.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1100.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1099.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1098.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1091.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1089.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1088.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1077.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1075.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1074.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1070.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1067.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1059.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1055.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1052.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1037.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1032.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1032.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1025.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1022.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1018.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1017.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1014.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1002.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1001.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 997.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 996.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 989.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 984.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 980.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 980.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 974.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 973.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 973.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 972.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 969.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 965.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 964.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 964.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 963.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 959.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 959.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 949.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 948.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 944.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 942.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 939.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 937.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 936.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 935.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 934.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 933.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 930.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 928.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 923.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 923.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 922.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 915.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 912.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 912.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 903.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 897.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 897.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 892.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 890.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 890.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 889.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 886.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 886.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 883.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 878.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 872.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 871.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 871.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 869.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 864.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 861.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 861.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 857.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 857.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 855.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 854.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 850.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 848.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 838.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 836.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 833.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 832.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 831.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 830.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 826.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 824.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 822.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 821.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 817.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 816.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 814.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 810.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 804.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 797.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 794.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 786.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 783.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 783.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 782.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 782.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 780.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 771.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 768.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 764.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 762.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 760.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 760.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 758.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 755.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 751.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 748.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 748.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 746.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 745.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 745.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 744.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 742.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 738.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 732.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 732.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 732.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 731.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 728.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 725.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 725.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 721.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 720.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 720.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 717.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 717.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 714.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 710.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 707.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 702.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 700.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 694.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 690.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 687.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 685.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 684.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 678.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 671.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 664.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 658.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 653.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 647.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 643.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 632.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 629.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 619.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 611.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 609.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 603.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 599.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 597.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 593.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 589.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 589.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 589.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 587.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 587.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 582.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 578.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 570.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 568.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 557.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 548.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 546.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 536.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 531.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 505.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 494.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 481.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 358.1
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Brain - Putamen (basal ganglia)
Average nTPM: 943.9
Samples: 205

Max nTPM: 3320.1
Min nTPM: 447.0
Std nTPM: 368.3
Median nTPM: 859.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3320.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2561.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2242.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2095.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2045.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1809.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1805.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1763.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1729.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1637.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1556.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1552.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1470.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1458.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1446.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1431.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1419.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1390.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1384.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1365.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1348.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1339.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1336.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1325.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1320.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1318.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1313.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1305.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1275.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1275.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1248.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1243.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1241.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1220.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1216.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1184.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1179.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1172.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1159.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1145.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1129.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1120.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1120.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1095.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1090.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1080.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1073.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1059.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1058.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1055.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1055.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1051.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1049.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1047.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1041.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1038.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1038.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1035.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1028.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1011.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1008.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 998.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 996.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 980.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 974.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 971.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 970.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 964.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 963.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 960.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 956.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 956.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 952.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 946.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 943.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 943.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 940.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 939.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 939.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 937.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 937.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 936.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 932.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 931.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 927.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 925.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 924.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 920.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 914.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 908.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 905.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 905.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 897.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 891.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 889.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 887.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 881.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 879.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 873.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 872.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 865.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 862.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 859.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 856.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 855.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 853.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 853.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 849.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 848.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 846.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 845.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 837.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 818.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 817.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 816.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 814.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 811.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 811.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 807.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 806.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 804.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 803.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 800.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 799.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 798.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 796.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 795.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 795.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 794.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 782.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 779.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 777.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 768.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 763.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 762.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 761.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 759.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 758.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 755.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 750.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 750.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 749.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 744.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 738.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 733.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 732.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 731.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 730.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 730.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 729.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 727.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 719.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 719.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 719.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 718.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 715.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 713.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 709.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 709.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 706.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 704.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 701.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 700.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 699.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 697.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 697.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 693.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 682.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 682.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 675.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 675.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 667.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 663.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 657.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 654.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 651.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 640.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 635.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 635.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 627.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 627.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 623.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 622.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 610.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 607.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 599.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 586.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 585.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 582.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 578.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 573.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 556.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 555.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 546.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 544.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 538.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 530.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 528.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 514.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 513.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 501.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 499.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 495.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 491.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 447.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

533.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 311.2
FF:10164-103B2 76 years, female 311.2
Nucleus accumbens
Scaled Tags Per Million: 245.6
FF:10037-101F1 23-56 years, mixed 245.6
Putamen
Scaled Tags Per Million: 358.4
FF:10176-103C5 60 years, female 358.4
Globus pallidus
Scaled Tags Per Million: 533.9
FF:10175-103C4 60 years, female 663.9
FF:10161-103A8 76 years, female 403.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

378.3
Pig sample Sample description nTPM
Caudate
nTPM: 258.3
Samples: 4

Max nTPM: 274.7
Min nTPM: 236.6
Sample A Female 256.6
Sample B Female 265.2
Sample C Male 274.7
Sample D Male 236.6
Putamen
nTPM: 378.3
Samples: 4

Max nTPM: 431.3
Min nTPM: 296.5
Sample A Female 431.3
Sample B Female 296.5
Sample C Male 418.6
Sample D Male 366.7
Septum
nTPM: 349.2
Samples: 4

Max nTPM: 436.5
Min nTPM: 280.3
Sample A Female 436.5
Sample B Female 352.2
Sample C Male 327.7
Sample D Male 280.3
Ventral pallidum
nTPM: 335.9
Samples: 4

Max nTPM: 433.2
Min nTPM: 272.2
Sample A Female 272.2
Sample B Female 433.2
Sample C Male 307.3
Sample D Male 330.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

898.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 839.0
Samples: 4

Max nTPM: 977.2
Min nTPM: 751.8
Sample A Male 787.9
Sample B Male 977.2
Sample C Female 751.8
Sample D Female 839.0
Septum
nTPM: 898.5
Samples: 4

Max nTPM: 1103.4
Min nTPM: 729.2
Sample A Male 729.2
Sample B Male 1103.4
Sample C Female 1014.4
Sample D Female 746.9
Ventral forebrain
nTPM: 822.2
Samples: 4

Max nTPM: 1120.0
Min nTPM: 656.6
Sample A Male 801.7
Sample B Male 710.6
Sample C Female 1120.0
Sample D Female 656.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.1
631721 Antisense, RP_040907_01_B12, Mouse strain C57BL/6J (56 days, male) 3.1
70928395 Antisense, RP_050808_02_A04, Mouse strain C57BL/6J (56 days, male) 1.0
Pallidum
Expression energy: 3.0
631721 Antisense, RP_040907_01_B12, Mouse strain C57BL/6J (56 days, male) 4.1
70928395 Antisense, RP_050808_02_A04, Mouse strain C57BL/6J (56 days, male) 1.8

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