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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Medium
Cells in molecular layer: High
Purkinje cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:805.1 nTPM
HPA Brain:387.2 nTPM
GTEx:805.1 nTPM
FANTOM5:180.0 Scaled Tags Per Million
Pig:379.9 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051653
Purkinje cells High
Cells in granular layer Medium
Cells in molecular layer High



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

387.2
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 387.2
1768 Female, age 72, unknown 575.7
2006 Male, age 61, right hemisphere 449.6
2055 Female, age 91, right hemisphere 379.6
1769 Male, age 76, right hemisphere 360.9
2101 Male, age 74, right hemisphere 350.7
1774 Male, age 80, left hemisphere 342.3
1788 Male, age 55, unknown 329.9
2003 Female, age 85, right hemisphere 309.2
Cerebellar nuclei
nTPM: 310.7
2783 Female, age 72, unknown 381.5
2175 Male, age 61, right hemisphere 380.9
1879 Male, age 55, unknown 330.8
1871 Male, age 74, unknown 313.0
2005 Male, age 80, left hemisphere 295.5
2318 Male, age 74, left hemisphere 284.8
2882 Male, age 76, left hemisphere 281.2
1966 Female, age 91, left hemisphere 278.8
2177 Female, age 85, both hemispheres 250.0
Flocculonodular lobe
nTPM: 332.9
1765 Male, age 55, unknown 390.3
2004 Male, age 61, right hemisphere 365.0
1771 Male, age 80, left hemisphere 340.8
1767 Male, age 76, left hemisphere 333.5
1792 Male, age 74, unknown 326.3
2176 Female, age 91, right hemisphere 296.5
1835 Female, age 85, right hemisphere 277.9
Vermis
nTPM: 317.2
1928 Female, age 72, unknown 420.0
1770 Male, age 76, left hemisphere 353.1
1825 Male, age 74, unknown 337.8
1778 Female, age 91, left hemisphere 332.8
2834 Male, age 80, left hemisphere 325.4
1766 Male, age 55, unknown 319.8
1751 Male, age 74, right hemisphere 318.8
1988 Female, age 85, left hemisphere 259.8
2460 Male, age 61, both hemispheres 187.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

805.1
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 805.1
Samples: 215

Max nTPM: 1832.3
Min nTPM: 417.5
Std nTPM: 226.0
Median nTPM: 762.4
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 1832.3
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 1730.0
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 1577.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 1558.6
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 1412.7
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 1407.2
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 1365.1
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 1321.2
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 1248.0
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 1221.6
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 1207.9
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 1199.9
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 1149.6
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 1145.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 1143.3
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 1135.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 1119.9
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 1104.3
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 1102.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 1097.2
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 1073.6
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 1072.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 1072.6
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 1069.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 1054.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 1048.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 1026.4
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 1019.9
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 1015.4
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 1011.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 1011.2
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 1009.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 1007.4
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 1004.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 1003.0
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 999.7
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 985.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 983.2
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 982.0
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 980.8
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 967.9
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 966.8
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 966.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 960.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 956.8
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 955.0
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 947.9
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 942.5
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 938.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 927.2
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 922.4
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 918.5
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 918.3
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 916.9
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 911.0
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 909.8
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 909.1
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 903.2
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 903.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 902.4
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 896.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 892.0
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 889.3
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 889.1
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 880.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 880.8
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 874.2
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 873.0
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 868.0
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 866.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 866.4
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 858.2
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 857.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 854.4
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 848.2
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 835.6
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 831.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 827.7
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 825.3
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 824.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 820.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 820.6
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 820.5
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 820.0
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 819.8
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 816.1
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 813.8
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 813.5
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 813.4
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 813.0
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 808.0
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 801.1
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 800.5
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 795.6
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 795.5
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 793.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 793.2
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 790.6
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 785.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 783.2
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 777.5
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 774.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 773.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 772.3
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 770.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 766.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 766.4
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 762.4
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 760.8
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 760.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 760.1
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 757.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 754.6
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 750.4
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 750.2
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 747.5
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 747.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 746.5
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 746.2
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 740.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 738.4
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 734.1
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 732.2
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 730.1
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 729.3
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 720.5
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 718.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 717.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 715.3
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 712.9
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 711.6
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 706.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 706.6
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 706.1
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 705.2
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 705.2
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 705.0
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 703.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 702.3
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 699.5
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 697.9
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 697.3
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 696.5
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 693.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 693.2
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 693.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 692.1
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 689.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 686.3
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 685.8
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 685.6
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 683.4
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 673.9
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 672.8
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 667.8
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 664.0
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 662.7
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 660.3
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 659.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 657.1
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 653.2
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 652.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 651.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 650.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 649.1
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 642.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 640.4
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 637.1
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 636.3
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 635.1
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 633.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 629.9
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 625.8
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 623.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 622.8
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 620.7
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 618.9
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 617.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 611.9
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 607.3
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 606.8
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 605.4
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 599.6
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 598.6
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 597.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 596.7
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 588.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 585.5
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 580.5
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 577.8
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 577.4
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 576.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 576.5
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 566.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 563.9
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 556.6
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 553.9
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 548.9
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 545.8
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 545.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 539.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 532.7
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 532.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 529.4
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 526.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 516.2
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 514.6
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 488.7
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 464.1
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 453.1
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 444.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 443.0
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 439.5
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 435.1
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 417.5
Show allShow less
Brain - Cerebellum
Average nTPM: 666.3
Samples: 241

Max nTPM: 1118.5
Min nTPM: 427.4
Std nTPM: 115.6
Median nTPM: 648.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 1118.5
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 1106.0
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 1016.6
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 1000.0
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 988.5
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 973.7
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 958.2
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 950.3
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 938.2
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 934.2
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 929.8
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 916.3
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 904.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 901.7
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 897.6
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 880.1
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 879.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 860.5
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 845.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 843.3
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 839.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 822.9
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 816.3
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 815.6
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 809.9
GTEX-14E6D-2926-SM-664OP 50-59 years, male 809.2
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 801.0
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 798.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 796.3
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 791.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 780.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 777.0
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 765.6
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 762.2
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 757.4
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 754.9
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 753.7
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 751.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 748.1
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 746.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 744.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 743.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 739.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 739.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 739.0
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 738.3
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 735.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 734.9
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 733.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 732.2
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 731.4
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 731.0
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 730.5
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 729.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 729.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 729.1
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 728.6
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 728.1
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 726.9
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 725.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 722.7
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 721.5
GTEX-X261-3126-SM-4PQZC 50-59 years, male 717.5
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 716.8
GTEX-WL46-2826-SM-3LK81 50-59 years, male 714.2
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 713.8
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 713.6
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 711.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 711.0
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 711.0
GTEX-11EI6-2926-SM-5985U 60-69 years, male 710.4
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 709.7
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 705.5
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 704.9
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 703.1
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 700.7
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 699.6
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 697.2
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 697.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 696.7
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 695.7
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 695.3
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 695.1
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 693.9
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 693.8
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 693.7
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 693.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 692.6
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 689.2
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 689.1
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 687.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 686.4
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 686.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 684.2
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 682.7
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 681.9
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 681.3
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 678.2
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 675.9
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 674.6
GTEX-14ABY-3026-SM-664NE 50-59 years, male 674.4
GTEX-1192X-3226-SM-5987D 50-59 years, male 673.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 672.1
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 670.8
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 669.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 668.1
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 667.3
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 664.0
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 662.3
GTEX-15G19-2826-SM-6M48K 60-69 years, male 658.7
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 658.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 657.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 656.9
GTEX-13112-2926-SM-5DUWT 50-59 years, male 656.8
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 656.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 655.8
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 653.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 650.5
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 649.2
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 649.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 648.1
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 647.8
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 647.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 644.2
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 643.7
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 642.0
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 640.9
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 640.5
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 638.8
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 638.5
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 636.1
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 636.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 635.4
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 635.0
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 632.2
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 631.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 631.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 630.0
GTEX-18465-2926-SM-7KFSE 50-59 years, male 629.8
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 629.6
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 628.7
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 628.5
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 627.8
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 627.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 625.6
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 624.1
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 623.5
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 622.9
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 622.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 620.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 619.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 618.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 618.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 616.0
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 614.2
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 613.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 612.7
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 610.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 610.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 609.9
GTEX-145LS-3026-SM-5O99S 60-69 years, female 607.9
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 607.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 607.4
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 605.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 605.7
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 605.5
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 605.1
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 603.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 603.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 603.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 602.0
GTEX-11ONC-3026-SM-5985W 60-69 years, male 600.7
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 599.4
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 599.2
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 598.3
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 597.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 594.3
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 593.9
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 592.8
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 590.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 588.5
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 586.4
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 584.9
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 583.4
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 583.1
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 579.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 577.5
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 577.5
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 576.1
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 575.6
GTEX-14PN4-3026-SM-664O4 50-59 years, male 572.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 571.1
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 569.8
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 569.0
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 567.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 564.0
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 562.8
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 561.4
GTEX-144GL-2926-SM-5O99F 50-59 years, male 559.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 557.6
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 557.6
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 556.9
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 556.5
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 553.7
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 553.5
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 551.2
GTEX-RU72-2926-SM-2TF66 50-59 years, female 550.6
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 548.9
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 548.7
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 548.0
GTEX-17EVP-2926-SM-793BU 40-49 years, male 546.5
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 544.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 544.1
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 543.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 543.1
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 542.9
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 535.4
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 535.1
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 534.2
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 534.1
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 533.6
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 531.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 530.6
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 530.6
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 530.3
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 528.7
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 528.5
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 528.1
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 526.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 513.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 509.1
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 507.2
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 502.6
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 502.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 501.0
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 497.6
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 495.5
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 491.1
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 486.5
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 449.5
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 427.4
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

180.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 180.0
FF:10083-102B2 22-68 years, mixed 263.6
FF:10166-103B4 76 years, female 96.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

379.9
Pig sample Sample description nTPM
Cerebellum
nTPM: 379.9
Samples: 4

Max nTPM: 493.0
Min nTPM: 314.3
Sample A Female 493.0
Sample B Female 355.6
Sample C Male 356.7
Sample D Male 314.3

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