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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:218.7 nTPM
HPA Brain:132.2 nTPM
GTEx:218.7 nTPM
FANTOM5:433.5 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 122.8
1981 Female, age 72, midline 157.2
2048 Male, age 55, midline 143.2
2816 Male, age 47, midline 115.7
2194 Female, age 79, both hemispheres 104.0
2565 Male, age 75, midline 93.8
Cervical spinal cord, dorsal horn
nTPM: 132.2
2173 Female, age 72, unknown 176.8
2296 Male, age 66, both hemispheres 165.5
2069 Male, age 47, both hemispheres 133.5
1877 Male, age 55, unknown 114.6
2721 Male, age 90, both hemispheres 113.6
2297 Male, age 75, both hemispheres 89.3
Cervical spinal cord, ventral horn
nTPM: 116.3
2098 Female, age 72, unknown 171.5
2480 Male, age 75, both hemispheres 115.8
2068 Male, age 55, unknown 115.3
2809 Male, age 90, both hemispheres 112.8
2820 Female, age 79, both hemispheres 92.3
2295 Male, age 66, both hemispheres 89.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

218.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 218.7
Samples: 159

Max nTPM: 1270.0
Min nTPM: 90.0
Std nTPM: 133.2
Median nTPM: 187.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1270.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 835.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 685.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 581.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 529.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 512.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 490.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 450.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 434.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 399.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 390.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 390.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 381.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 329.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 327.2
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 314.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 312.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 311.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 305.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 299.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 298.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 286.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 279.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 268.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 263.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 261.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 260.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 255.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 255.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 249.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 247.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 244.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 243.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 243.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 242.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 239.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 238.2
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 236.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 233.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 233.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 231.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 230.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 229.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 225.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 223.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 222.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 221.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 220.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 220.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 219.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 218.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 216.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 212.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 211.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 209.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 209.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 207.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 206.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 206.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 205.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 205.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 205.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 202.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 199.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 198.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 198.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 197.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 194.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 193.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 193.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 193.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 192.9
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 192.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 192.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 190.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 189.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 188.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 187.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 187.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 187.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 187.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 186.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 186.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 185.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 179.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 179.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 179.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 177.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 176.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 176.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 175.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 175.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 174.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 174.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 174.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 174.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 173.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 171.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 169.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 169.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 169.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 167.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 167.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 167.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 166.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 165.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 164.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 164.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 164.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 160.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 160.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 160.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 158.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 158.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 155.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 153.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 153.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 153.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 152.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 151.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 150.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 150.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 150.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 148.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 148.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 148.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 146.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 145.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 145.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 145.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 144.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 143.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 143.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 142.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 142.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 141.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 140.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 138.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 137.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 134.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 133.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 133.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 132.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 131.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 129.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 129.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 125.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 124.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 123.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 121.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 118.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 117.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 115.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 109.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 108.6
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 103.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 103.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 102.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 90.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

433.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 433.5
FF:10181-103D1 60 years, female 496.0
FF:10159-103A6 76 years, female 371.0

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