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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:57.5 nTPM
HPA Brain:317.8 nTPM
GTEx:57.5 nTPM
FANTOM5:233.6 Scaled Tags Per Million
Pig:65.3 nTPM
Mouse:81.4 nTPM
Allen mouse:17.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA028075
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

317.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 218.6
2288 Male, age 75, left hemisphere 279.3
2846 Female, age 79, unknown 252.5
1781 Male, age 74, unknown 243.6
2290 Female, age 72, unknown 232.9
2289 Male, age 61, right hemisphere 220.5
1857 Female, age 85, left hemisphere 193.0
1854 Male, age 80, left hemisphere 173.2
2481 Female, age 94, left hemisphere 153.8
Globus pallidus, externus
nTPM: 306.6
2567 Female, age 72, unknown 349.0
2646 Male, age 61, right hemisphere 346.5
1996 Male, age 80, right hemisphere 296.4
2772 Female, age 79, unknown 277.7
2395 Male, age 75, both hemispheres 263.2
Globus pallidus, internus
nTPM: 317.8
2566 Female, age 72, unknown 400.5
2287 Male, age 75, right hemisphere 375.1
2111 Female, age 85, right hemisphere 371.0
2778 Female, age 91, both hemispheres 322.9
1818 Male, age 74, unknown 319.7
2037 Male, age 80, right hemisphere 268.9
2483 Female, age 94, right hemisphere 166.2
Nucleus accumbens
nTPM: 228.9
2698 Female, age 72, unknown 314.4
1783 Male, age 74, unknown 260.5
2286 Male, age 75, left hemisphere 231.3
1806 Female, age 85, left hemisphere 225.0
2824 Male, age 61, right hemisphere 221.2
2391 Female, age 94, left hemisphere 194.9
2732 Male, age 80, right hemisphere 194.9
1856 Female, age 91, right hemisphere 188.6
Nucleus basalis of Meynert
nTPM: 246.9
2569 Male, age 61, both hemispheres 354.3
2821 Male, age 75, both hemispheres 291.8
2484 Female, age 94, left hemisphere 171.9
2393 Male, age 80, right hemisphere 169.7
Nucleus of the diagonal band
nTPM: 220.1
2195 Female, age 85, both hemispheres 249.6
1812 Female, age 91, both hemispheres 230.5
1979 Male, age 74, unknown 209.3
2775 Male, age 80, right hemisphere 208.3
2029 Male, age 61, right hemisphere 202.8
Putamen
nTPM: 218.5
2647 Male, age 75, left hemisphere 297.1
1829 Male, age 74, unknown 273.7
2489 Female, age 72, unknown 224.8
1937 Female, age 91, right hemisphere 195.9
1838 Male, age 80, right hemisphere 190.2
2466 Female, age 79, unknown 183.0
2482 Female, age 94, left hemisphere 164.8
Septal nuclei
nTPM: 220.7
2629 Female, age 94, right hemisphere 285.2
2059 Female, age 85, both hemispheres 243.2
1960 Male, age 74, unknown 231.1
2394 Male, age 61, left hemisphere 225.9
2199 Male, age 80, right hemisphere 215.7
2031 Female, age 72, unknown 173.8
2009 Female, age 91, both hemispheres 170.0
Stria terminalis, bed nucleus
nTPM: 190.4
2201 Male, age 74, unknown 205.4
1974 Female, age 91, both hemispheres 193.2
2486 Female, age 94, both hemispheres 172.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 51.3
Samples: 246

Max nTPM: 94.8
Min nTPM: 23.6
Std nTPM: 14.2
Median nTPM: 48.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 94.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 88.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 84.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 83.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 83.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 80.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 78.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 78.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 77.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 77.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 75.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 75.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 74.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 74.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 74.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 73.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 73.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 73.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 72.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 71.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 71.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 71.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 71.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 70.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 70.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 69.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 69.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 69.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 69.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 68.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 68.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 68.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 68.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 68.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 68.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 68.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 67.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 67.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 67.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 67.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 66.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 66.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 66.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 65.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 65.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 65.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 64.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 64.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 64.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 64.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 64.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 64.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 64.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 63.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 63.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 63.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 62.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 62.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 62.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 61.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 61.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 61.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 61.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 61.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 61.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 61.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 61.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 61.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 60.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 60.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 60.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 59.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 59.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 59.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 59.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 59.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 59.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 58.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 58.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 58.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 57.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 57.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 57.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 57.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 57.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 56.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 56.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 56.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 56.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 56.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 56.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 55.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 55.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 55.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 55.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 55.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 55.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 54.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 53.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 53.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 53.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 53.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 52.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 52.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 52.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 52.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 52.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 51.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 51.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 51.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 51.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 50.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 50.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 50.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 50.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 49.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 49.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 49.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 49.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 48.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 48.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 48.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 48.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 48.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 47.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 47.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 47.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 47.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 47.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 47.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 47.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 47.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 47.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 47.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 47.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 47.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 46.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 46.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 46.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 46.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 46.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 46.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 46.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 45.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 45.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 45.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 45.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 45.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 44.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 44.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 44.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 44.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 44.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 44.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 43.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 43.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 43.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 43.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 43.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 42.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 42.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 42.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 42.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 42.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 42.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 42.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 42.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 42.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 42.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 41.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 41.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 41.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 41.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 41.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 41.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 41.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 40.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 40.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 40.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 40.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 40.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 39.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 39.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 39.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 39.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 39.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 38.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 38.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 38.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 38.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 37.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 37.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 37.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 37.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 37.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 37.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 37.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 37.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 37.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 36.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 36.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 36.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 36.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 35.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 35.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 35.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 34.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 34.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 34.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 34.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 34.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 33.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 33.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 33.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 32.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 32.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 32.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 31.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 31.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 31.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 30.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 30.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 30.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 30.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 29.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 29.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 29.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 29.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 28.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 28.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 28.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 27.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 27.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 26.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 26.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 26.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 23.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 57.5
Samples: 246

Max nTPM: 115.0
Min nTPM: 10.3
Std nTPM: 19.8
Median nTPM: 59.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 115.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 102.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 102.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 93.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 93.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 92.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 92.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 91.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 89.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 87.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 86.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 86.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 85.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 85.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 85.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 85.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 84.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 84.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 84.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 83.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 83.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 83.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 83.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 82.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 82.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 81.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 81.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 81.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 81.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 80.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 80.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 80.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 80.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 79.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 79.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 78.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 78.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 78.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 77.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 77.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 77.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 77.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 77.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 77.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 76.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 76.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 76.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 76.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 76.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 76.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 75.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 75.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 75.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 75.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 74.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 74.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 74.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 73.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 73.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 73.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 73.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 73.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 72.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 72.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 72.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 72.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 72.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 71.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 71.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 71.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 71.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 71.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 70.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 69.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 69.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 69.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 68.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 68.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 68.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 68.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 68.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 67.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 67.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 67.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 66.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 66.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 66.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 66.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 66.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 66.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 65.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 65.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 65.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 65.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 64.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 64.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 64.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 64.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 64.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 64.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 63.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 63.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 63.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 63.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 63.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 63.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 63.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 63.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 62.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 62.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 62.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 62.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 62.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 61.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 61.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 61.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 61.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 61.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 60.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 60.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 60.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 60.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 60.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 59.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 59.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 59.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 58.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 58.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 58.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 58.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 57.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 57.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 57.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 57.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 57.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 56.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 56.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 56.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 56.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 56.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 56.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 56.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 55.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 55.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 55.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 55.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 54.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 54.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 54.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 53.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 53.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 52.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 52.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 52.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 52.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 51.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 51.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 51.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 51.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 50.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 49.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 48.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 48.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 47.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 47.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 46.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 46.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 46.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 46.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 45.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 45.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 45.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 45.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 44.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 44.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 43.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 43.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 42.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 42.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 41.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 41.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 41.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 40.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 40.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 40.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 40.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 39.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 38.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 38.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 38.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 38.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 38.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 37.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 37.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 36.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 36.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 36.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 36.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 36.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 36.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 36.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 36.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 36.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 35.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 34.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 34.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 34.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 34.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 33.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 33.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 32.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 32.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 32.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 32.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 31.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 31.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 31.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 30.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 30.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 30.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 29.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 29.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 29.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 29.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 28.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 28.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 27.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 27.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 27.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 26.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 26.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 26.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 25.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 25.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 25.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 25.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 24.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 23.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 23.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 23.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 22.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 22.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 22.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 20.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 18.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 10.3
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Brain - Putamen (basal ganglia)
Average nTPM: 57.1
Samples: 205

Max nTPM: 152.8
Min nTPM: 21.5
Std nTPM: 17.9
Median nTPM: 54.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 152.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 113.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 103.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 99.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 92.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 92.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 90.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 87.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 87.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 85.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 84.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 84.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 84.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 83.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 82.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 81.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 81.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 80.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 80.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 80.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 78.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 78.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 78.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 78.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 78.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 75.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 75.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 75.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 75.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 74.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 74.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 74.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 73.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 73.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 73.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 73.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 73.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 73.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 73.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 73.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 73.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 73.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 72.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 72.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 71.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 71.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 71.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 70.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 69.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 69.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 69.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 67.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 67.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 67.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 67.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 67.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 67.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 66.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 66.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 65.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 64.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 64.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 64.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 64.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 63.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 63.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 63.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 63.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 63.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 63.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 62.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 62.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 62.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 62.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 62.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 61.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 61.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 61.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 60.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 60.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 60.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 60.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 59.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 59.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 59.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 58.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 58.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 58.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 58.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 58.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 58.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 57.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 56.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 56.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 56.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 56.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 56.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 55.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 55.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 55.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 54.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 54.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 54.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 54.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 54.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 54.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 53.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 53.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 53.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 53.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 53.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 53.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 53.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 53.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 53.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 52.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 52.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 52.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 52.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 52.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 52.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 51.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 51.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 51.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 51.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 51.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 51.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 50.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 50.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 50.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 50.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 50.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 49.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 49.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 49.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 49.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 49.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 48.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 48.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 48.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 48.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 47.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 47.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 47.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 47.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 46.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 46.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 46.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 46.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 46.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 46.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 46.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 45.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 45.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 45.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 44.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 44.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 44.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 44.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 43.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 43.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 43.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 42.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 42.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 42.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 42.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 41.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 41.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 40.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 40.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 39.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 39.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 38.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 37.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 37.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 37.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 37.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 36.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 35.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 35.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 35.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 35.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 35.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 34.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 34.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 34.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 33.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 33.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 33.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 32.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 32.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 31.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 31.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 30.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 30.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 30.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 30.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 29.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 28.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 28.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 28.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 28.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 27.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 21.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

233.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 180.2
FF:10164-103B2 76 years, female 180.2
Nucleus accumbens
Scaled Tags Per Million: 227.0
FF:10037-101F1 23-56 years, mixed 227.0
Putamen
Scaled Tags Per Million: 232.9
FF:10176-103C5 60 years, female 232.9
Globus pallidus
Scaled Tags Per Million: 233.6
FF:10175-103C4 60 years, female 244.8
FF:10161-103A8 76 years, female 222.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.3
Pig sample Sample description nTPM
Caudate
nTPM: 55.4
Samples: 4

Max nTPM: 68.0
Min nTPM: 45.8
Sample A Female 45.8
Sample B Female 57.2
Sample C Male 68.0
Sample D Male 50.4
Putamen
nTPM: 62.2
Samples: 4

Max nTPM: 73.4
Min nTPM: 50.6
Sample A Female 61.9
Sample B Female 50.6
Sample C Male 63.0
Sample D Male 73.4
Septum
nTPM: 57.3
Samples: 4

Max nTPM: 59.6
Min nTPM: 54.7
Sample A Female 57.8
Sample B Female 56.9
Sample C Male 59.6
Sample D Male 54.7
Ventral pallidum
nTPM: 65.3
Samples: 4

Max nTPM: 80.8
Min nTPM: 54.0
Sample A Female 54.0
Sample B Female 62.1
Sample C Male 80.8
Sample D Male 64.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 77.2
Samples: 4

Max nTPM: 91.2
Min nTPM: 69.3
Sample A Male 75.1
Sample B Male 91.2
Sample C Female 73.2
Sample D Female 69.3
Septum
nTPM: 75.4
Samples: 4

Max nTPM: 80.0
Min nTPM: 68.8
Sample A Male 80.0
Sample B Male 68.8
Sample C Female 73.0
Sample D Female 79.6
Ventral forebrain
nTPM: 81.5
Samples: 4

Max nTPM: 88.0
Min nTPM: 75.0
Sample A Male 88.0
Sample B Male 76.3
Sample C Female 86.5
Sample D Female 75.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 17.4
70429166 Antisense, RP_050614_01_B06, Mouse strain C57BL/6J (56 days, male) 17.4
Pallidum
Expression energy: 16.3
70429166 Antisense, RP_050614_01_B06, Mouse strain C57BL/6J (56 days, male) 16.3

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