PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:364.6 nTPM
FANTOM5:257.5 Scaled Tags Per Million
Pig:78.0 nTPM
Mouse:70.3 nTPM
Allen mouse:14.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 364.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 330.0
2301 Female, age 85, both hemispheres 473.5
2188 Female, age 91, both hemispheres 317.6
2090 Male, age 80, both hemispheres 268.8
1984 Male, age 76, both hemispheres 260.1
Area postrema
nTPM: 287.4
2306 Male, age 80, both hemispheres 323.5
2799 Male, age 61, both hemispheres 322.2
2054 Male, age 76, both hemispheres 216.5
Dorsal cochlear nucleus
nTPM: 282.8
2187 Female, age 91, both hemispheres 305.9
2802 Male, age 74, right hemisphere 291.7
2058 Male, age 76, both hemispheres 282.5
2370 Male, age 61, both hemispheres 270.1
2378 Male, age 80, both hemispheres 263.9
Dorsal medullary reticular nucleus
nTPM: 303.1
2373 Male, age 61, both hemispheres 310.8
2040 Female, age 85, both hemispheres 301.2
2088 Male, age 76, both hemispheres 297.3
Dorsal motor vagal complex
nTPM: 294.6
2185 Male, age 76, both hemispheres 331.6
2643 Male, age 74, both hemispheres 311.1
2813 Female, age 72, unknown 301.3
2844 Male, age 55, unknown 300.9
2797 Male, age 61, both hemispheres 294.9
2807 Female, age 85, both hemispheres 277.8
2000 Male, age 74, unknown 269.6
2133 Female, age 91, both hemispheres 269.2
Dorsal tegmental nucleus
nTPM: 330.3
2358 Male, age 61, both hemispheres 492.3
2083 Male, age 80, both hemispheres 321.9
2326 Male, age 74, both hemispheres 258.7
1936 Male, age 76, left hemisphere 248.2
Dorsolateral tegmental area
nTPM: 258.8
2654 Male, age 80, both hemispheres 311.5
2337 Male, age 61, both hemispheres 306.8
2751 Female, age 85, both hemispheres 272.5
2141 Male, age 76, both hemispheres 217.5
2360 Male, age 74, both hemispheres 185.6
Gigantocellular reticular nuclei, medullary
nTPM: 302.6
2310 Male, age 80, both hemispheres 371.3
2314 Male, age 61, both hemispheres 351.0
2387 Female, age 91, both hemispheres 329.5
2462 Male, age 74, both hemispheres 270.6
1876 Female, age 85, both hemispheres 265.8
2022 Male, age 76, right hemisphere 227.4
Gigantocellular reticular nuclei, pars
nTPM: 345.3
2330 Male, age 80, both hemispheres 392.7
2706 Male, age 80, both hemispheres 365.8
2336 Male, age 61, both hemispheres 364.3
2168 Male, age 76, both hemispheres 306.8
2084 Female, age 85, both hemispheres 297.0
Inferior olive
nTPM: 330.3
2628 Female, age 91, both hemispheres 502.0
2085 Female, age 85, both hemispheres 301.7
2563 Male, age 74, both hemispheres 290.0
2178 Male, age 61, both hemispheres 282.1
2379 Male, age 80, both hemispheres 275.5
Kolliker-Fuse nucleus
nTPM: 337.8
2793 Female, age 91, left hemisphere 488.6
2163 Male, age 80, both hemispheres 321.7
2315 Male, age 76, right hemisphere 203.0
Lateral lemniscal nuclei
nTPM: 313.4
2320 Female, age 91, left hemisphere 411.5
2169 Male, age 76, both hemispheres 342.2
2453 Male, age 74, right hemisphere 326.6
2746 Female, age 85, left hemisphere 299.3
2036 Male, age 80, both hemispheres 187.4
Lateral medullary reticular nucleus
nTPM: 329.1
2374 Male, age 61, both hemispheres 388.6
2852 Male, age 80, both hemispheres 366.5
2044 Male, age 76, both hemispheres 324.6
2804 Female, age 91, both hemispheres 307.5
2305 Male, age 74, both hemispheres 307.3
2190 Female, age 85, both hemispheres 280.2
Lateral parabrachial nucleus
nTPM: 300.5
2792 Male, age 76, both hemispheres 344.4
2790 Male, age 61, both hemispheres 344.2
2013 Male, age 80, both hemispheres 261.8
2139 Female, age 85, right hemisphere 251.7
Lateral vestibular nucleus
nTPM: 361.9
2184 Male, age 76, both hemispheres 363.3
2311 Male, age 80, both hemispheres 360.4
Locus coeruleus
nTPM: 286.8
2720 Male, age 74, both hemispheres 409.7
1980 Male, age 76, both hemispheres 305.2
2123 Female, age 91, both hemispheres 282.2
2162 Male, age 80, both hemispheres 281.3
2317 Female, age 72, unknown 270.2
2014 Male, age 55, unknown 263.1
2788 Male, age 74, unknown 195.9
Medial olivary nucleus
nTPM: 286.9
2851 Male, age 80, both hemispheres 402.4
1962 Male, age 76, both hemispheres 260.7
1943 Male, age 61, both hemispheres 254.3
2138 Female, age 91, both hemispheres 230.1
Medial parabrachial nucleus
nTPM: 318.6
2854 Male, age 80, both hemispheres 352.7
2170 Female, age 91, both hemispheres 339.7
2156 Male, age 61, both hemispheres 329.3
2786 Male, age 76, both hemispheres 302.5
2463 Female, age 85, right hemisphere 269.1
Medial periolivary nuclei
nTPM: 313.0
2458 Female, age 91, both hemispheres 362.3
2171 Female, age 85, both hemispheres 327.7
2063 Male, age 76, both hemispheres 309.1
2081 Male, age 80, both hemispheres 302.3
2791 Male, age 74, right hemisphere 263.8
Medial vestibular nucleus
nTPM: 346.1
2624 Male, age 61, both hemispheres 531.8
2801 Male, age 74, both hemispheres 388.6
2803 Female, age 91, both hemispheres 335.6
2134 Male, age 76, both hemispheres 296.7
2093 Male, age 80, both hemispheres 270.8
2743 Female, age 85, both hemispheres 253.2
Motor facial nucleus
nTPM: 351.1
2697 Female, age 85, both hemispheres 464.6
2327 Male, age 80, both hemispheres 389.3
2795 Female, age 91, both hemispheres 342.7
2062 Male, age 76, both hemispheres 320.3
2365 Male, age 74, right hemisphere 309.9
2126 Male, age 61, both hemispheres 279.9
Motor hypoglossal nucleus
nTPM: 352.7
2182 Male, age 80, both hemispheres 456.2
2461 Male, age 61, both hemispheres 411.5
2125 Female, age 91, both hemispheres 338.9
2132 Female, age 85, both hemispheres 329.9
2277 Male, age 76, both hemispheres 227.1
Motor trigeminal nucleus
nTPM: 326.4
2321 Female, age 91, both hemispheres 366.6
2560 Male, age 74, both hemispheres 337.7
2335 Male, age 61, both hemispheres 337.1
2079 Male, age 80, both hemispheres 296.6
2309 Male, age 76, both hemispheres 293.7
Nuclei of the trapezoid body
nTPM: 318.4
2159 Male, age 61, both hemispheres 332.0
2368 Female, age 91, both hemispheres 330.5
2166 Male, age 80, both hemispheres 327.0
2735 Female, age 85, both hemispheres 301.7
1983 Male, age 76, both hemispheres 300.9
Nucleus ambiguus
nTPM: 364.6
2096 Female, age 85, both hemispheres 444.3
2071 Male, age 76, both hemispheres 284.9
Nucleus cuneatus
nTPM: 338.0
2131 Male, age 76, both hemispheres 384.6
2381 Male, age 80, both hemispheres 346.9
2100 Male, age 76, both hemispheres 346.2
2808 Female, age 85, both hemispheres 341.5
2376 Male, age 61, both hemispheres 338.8
2805 Female, age 91, both hemispheres 336.6
2562 Male, age 61, both hemispheres 324.0
2380 Male, age 80, both hemispheres 316.7
2564 Male, age 74, both hemispheres 306.9
Nucleus gracilis
nTPM: 321.6
2627 Male, age 74, both hemispheres 345.7
2382 Male, age 80, both hemispheres 338.8
2299 Female, age 85, both hemispheres 280.1
Nucleus raphe magnus
nTPM: 350.0
2328 Male, age 80, both hemispheres 392.4
2160 Male, age 61, both hemispheres 365.0
2172 Female, age 85, both hemispheres 353.9
2051 Male, age 76, both hemispheres 346.4
2459 Female, age 91, both hemispheres 330.9
2455 Male, age 74, both hemispheres 311.3
Nucleus raphe obscurus
nTPM: 320.5
2845 Female, age 85, midline 396.0
2800 Male, age 61, midline 302.9
2142 Male, age 76, midline 262.6
Nucleus raphe pallidus
nTPM: 293.7
2183 Male, age 80, midline 318.8
2145 Male, age 76, midline 298.1
1924 Male, age 61, midline 264.3
Nucleus tractus solitarii
nTPM: 226.9
2307 Male, age 80, both hemispheres 316.7
2656 Male, age 76, both hemispheres 255.4
2191 Female, age 85, both hemispheres 226.6
2144 Female, age 91, right hemisphere 108.8
Paramedian reticular nucleus
nTPM: 272.6
2313 Male, age 61, both hemispheres 313.3
2050 Female, age 85, both hemispheres 296.8
2057 Male, age 80, both hemispheres 279.9
2052 Male, age 76, both hemispheres 200.4
Parvicellular reticular nuclei
nTPM: 312.1
2558 Male, age 74, both hemispheres 352.2
2119 Male, age 80, both hemispheres 299.2
2095 Male, age 76, both hemispheres 284.9
Parvicellular reticular nuclei, medullary
nTPM: 295.1
2189 Female, age 91, both hemispheres 308.8
2091 Female, age 85, both hemispheres 303.4
2181 Male, age 80, left hemisphere 273.1
Pedunculopontine tegmental nucleus
nTPM: 285.5
2334 Male, age 80, both hemispheres 315.1
2338 Male, age 61, both hemispheres 310.4
1921 Female, age 85, both hemispheres 230.9
Peritrigeminal nucleus
nTPM: 317.3
2179 Male, age 61, both hemispheres 337.2
2067 Female, age 85, both hemispheres 310.2
2136 Male, age 76, both hemispheres 304.4
Pontine nuclei
nTPM: 341.5
2787 Female, age 85, both hemispheres 394.8
1968 Male, age 76, left hemisphere 358.3
1863 Male, age 55, unknown 355.0
2319 Female, age 91, both hemispheres 341.6
2454 Male, age 74, left hemisphere 337.2
2109 Female, age 72, unknown 335.4
2115 Male, age 80, left hemisphere 317.6
2727 Male, age 61, right hemisphere 292.2
Pontine raphe nucleus
nTPM: 278.9
2853 Male, age 76, midline 290.8
2122 Female, age 85, midline 266.9
Posteroventral cochlear nucleus
nTPM: 267.9
2070 Male, age 76, both hemispheres 290.9
2371 Male, age 61, both hemispheres 281.4
2135 Female, age 91, both hemispheres 268.6
2341 Male, age 80, both hemispheres 264.2
2752 Female, age 85, both hemispheres 234.7
Prepositus hypoglossal nucleus
nTPM: 283.4
2855 Female, age 85, right hemisphere 324.7
2086 Male, age 80, both hemispheres 242.1
Principal sensory trigeminal nucleus
nTPM: 333.0
2367 Female, age 91, left hemisphere 370.0
2324 Male, age 76, both hemispheres 367.2
2158 Male, age 61, both hemispheres 348.7
2008 Male, age 80, left hemisphere 245.9
Reticular pontine nucleus, caudal
nTPM: 363.3
2457 Female, age 91, both hemispheres 438.8
2332 Male, age 80, right hemisphere 409.2
2559 Male, age 74, both hemispheres 307.3
2092 Male, age 76, both hemispheres 297.9
Reticular pontine nucleus, oral
nTPM: 320.4
2366 Female, age 91, both hemispheres 415.0
2361 Male, age 74, both hemispheres 353.9
2167 Male, age 76, both hemispheres 283.5
1939 Male, age 80, both hemispheres 283.1
2012 Female, age 85, both hemispheres 266.6
Reticulotegmental nucleus
nTPM: 329.0
2322 Female, age 91, both hemispheres 366.9
2333 Male, age 80, both hemispheres 341.8
2452 Male, age 74, both hemispheres 319.3
2325 Male, age 76, both hemispheres 287.9
Spinal trigeminal nucleus, caudal
nTPM: 359.9
2447 Male, age 76, both hemispheres 385.6
2308 Male, age 80, both hemispheres 364.1
2390 Female, age 91, both hemispheres 362.1
2642 Male, age 74, both hemispheres 352.8
2312 Male, age 61, both hemispheres 334.9
Spinal trigeminal nucleus, interpolar
nTPM: 340.3
2625 Male, age 61, both hemispheres 510.5
2389 Female, age 91, both hemispheres 344.9
2066 Male, age 76, right hemisphere 301.9
2033 Male, age 80, both hemispheres 275.8
2386 Female, age 85, both hemispheres 268.1
Spinal trigeminal nucleus, oral
nTPM: 306.9
2164 Male, age 80, both hemispheres 395.9
1978 Male, age 76, both hemispheres 267.0
2737 Female, age 85, both hemispheres 257.9
Spinal vestibular nucleus
nTPM: 303.1
2796 Male, age 61, both hemispheres 360.7
2748 Male, age 76, both hemispheres 332.4
2806 Female, age 85, both hemispheres 296.6
2780 Male, age 80, both hemispheres 289.3
2186 Female, age 91, both hemispheres 288.7
2384 Male, age 74, both hemispheres 250.7
Subcoeruleus area
nTPM: 282.2
2323 Female, age 91, left hemisphere 306.0
2089 Male, age 76, left hemisphere 302.2
2369 Female, age 85, left hemisphere 294.0
1958 Male, age 80, both hemispheres 278.7
2451 Male, age 74, both hemispheres 230.0
Superior olive
nTPM: 337.8
2561 Female, age 91, both hemispheres 406.8
2329 Male, age 80, right hemisphere 390.9
2020 Male, age 76, both hemispheres 301.4
1875 Female, age 85, both hemispheres 297.5
2364 Male, age 74, right hemisphere 292.3
Superior vestibular nucleus
nTPM: 232.7
2015 Male, age 80, both hemispheres 248.5
2061 Male, age 76, both hemispheres 247.7
2383 Male, age 74, both hemispheres 201.9
Ventral medullary reticular nucleus
nTPM: 304.4
2060 Male, age 76, both hemispheres 322.4
2372 Male, age 61, both hemispheres 286.4
Ventral periolivary nuclei
nTPM: 318.5
2165 Male, age 80, both hemispheres 363.8
2130 Female, age 85, both hemispheres 343.6
2794 Female, age 91, left hemisphere 317.4
2023 Male, age 76, both hemispheres 249.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 306.6
2302 Female, age 91, both hemispheres 318.0
2741 Female, age 85, both hemispheres 314.1
2118 Male, age 80, both hemispheres 310.0
2180 Male, age 61, both hemispheres 303.2
1986 Male, age 76, both hemispheres 287.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 329.8
2840 Female, age 85, both hemispheres 367.2
2456 Female, age 91, both hemispheres 346.9
2161 Male, age 80, both hemispheres 333.6
2449 Male, age 74, both hemispheres 313.6
1959 Male, age 76, both hemispheres 310.0
2359 Male, age 61, both hemispheres 307.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 257.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 235.6
FF:10182-103D2 60 years, female 245.7
FF:10165-103B3 76 years, female 225.6
Medulla oblongata
Scaled Tags Per Million: 173.3
FF:10038-101F2 18-64 years, mixed 207.9
FF:10155-103A2 76 years, female 156.3
FF:10174-103C3 60 years, female 155.9
Pons
Scaled Tags Per Million: 257.5
FF:10033-101E6 18-54 years, mixed 257.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 78.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 78.0
Samples: 4

Max nTPM: 87.2
Min nTPM: 71.4
Sample A Female 81.6
Sample B Female 71.4
Sample C Male 87.2
Sample D Male 71.9
Pons
nTPM: 73.6
Samples: 4

Max nTPM: 87.2
Min nTPM: 55.5
Sample A Female 87.2
Sample B Female 55.5
Sample C Male 64.6
Sample D Male 87.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 70.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 70.3
Samples: 4

Max nTPM: 77.6
Min nTPM: 66.0
Sample A Male 77.6
Sample B Male 66.0
Sample C Female 71.0
Sample D Female 66.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 14.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.1
70429166 Antisense, RP_050614_01_B06, Mouse strain C57BL/6J (56 days, male) 14.1
Pons
Expression energy: 12.7
70429166 Antisense, RP_050614_01_B06, Mouse strain C57BL/6J (56 days, male) 12.7

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