We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SPP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SPP1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:292.7 nTPM
HPA Brain:711.2 nTPM
GTEx:292.7 nTPM
FANTOM5:2109.1 Scaled Tags Per Million
Pig:268.9 nTPM
Mouse:25.0 nTPM
Allen mouse:2.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA027541
Glial cells Not detected
Neuronal cells Low


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

711.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 216.4
1781 Male, age 74, unknown 289.1
2846 Female, age 79, unknown 272.4
1854 Male, age 80, left hemisphere 253.6
2288 Male, age 75, left hemisphere 230.5
2481 Female, age 94, left hemisphere 221.3
1857 Female, age 85, left hemisphere 200.3
2290 Female, age 72, unknown 155.5
2289 Male, age 61, right hemisphere 108.3
Globus pallidus, externus
nTPM: 699.6
2395 Male, age 75, both hemispheres 1495.4
2772 Female, age 79, unknown 810.4
1996 Male, age 80, right hemisphere 764.2
2567 Female, age 72, unknown 309.9
2646 Male, age 61, right hemisphere 118.2
Globus pallidus, internus
nTPM: 711.2
2111 Female, age 85, right hemisphere 1024.9
1818 Male, age 74, unknown 875.3
2778 Female, age 91, both hemispheres 820.1
2037 Male, age 80, right hemisphere 695.9
2566 Female, age 72, unknown 666.2
2287 Male, age 75, right hemisphere 590.6
2483 Female, age 94, right hemisphere 305.6
Nucleus accumbens
nTPM: 292.8
2391 Female, age 94, left hemisphere 666.0
2698 Female, age 72, unknown 461.9
2732 Male, age 80, right hemisphere 324.9
2286 Male, age 75, left hemisphere 246.4
1806 Female, age 85, left hemisphere 229.2
1783 Male, age 74, unknown 222.7
1856 Female, age 91, right hemisphere 124.0
2824 Male, age 61, right hemisphere 67.2
Nucleus basalis of Meynert
nTPM: 284.8
2821 Male, age 75, both hemispheres 602.1
2393 Male, age 80, right hemisphere 254.7
2484 Female, age 94, left hemisphere 202.2
2569 Male, age 61, both hemispheres 80.4
Nucleus of the diagonal band
nTPM: 116.3
1812 Female, age 91, both hemispheres 230.1
2775 Male, age 80, right hemisphere 131.7
2029 Male, age 61, right hemisphere 92.1
1979 Male, age 74, unknown 81.3
2195 Female, age 85, both hemispheres 46.2
Putamen
nTPM: 261.0
2482 Female, age 94, left hemisphere 541.2
1829 Male, age 74, unknown 331.8
2489 Female, age 72, unknown 254.9
2466 Female, age 79, unknown 217.3
1937 Female, age 91, right hemisphere 210.3
2647 Male, age 75, left hemisphere 136.0
1838 Male, age 80, right hemisphere 135.5
Septal nuclei
nTPM: 185.7
2394 Male, age 61, left hemisphere 489.0
2199 Male, age 80, right hemisphere 229.7
2629 Female, age 94, right hemisphere 212.6
2009 Female, age 91, both hemispheres 126.3
2059 Female, age 85, both hemispheres 110.0
2031 Female, age 72, unknown 87.6
1960 Male, age 74, unknown 44.4
Stria terminalis, bed nucleus
nTPM: 107.8
2201 Male, age 74, unknown 132.7
1974 Female, age 91, both hemispheres 112.4
2486 Female, age 94, both hemispheres 78.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

292.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 257.4
Samples: 246

Max nTPM: 7444.7
Min nTPM: 24.2
Std nTPM: 503.9
Median nTPM: 168.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 7444.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1322.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1279.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1154.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1092.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 962.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 901.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 897.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 882.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 855.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 812.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 773.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 737.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 676.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 602.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 588.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 586.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 573.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 570.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 540.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 487.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 457.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 434.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 427.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 421.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 404.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 395.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 392.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 378.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 373.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 372.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 366.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 363.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 363.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 362.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 356.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 345.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 333.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 333.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 330.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 329.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 327.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 319.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 317.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 313.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 313.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 309.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 308.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 307.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 307.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 298.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 294.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 291.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 275.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 272.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 271.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 268.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 261.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 258.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 256.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 253.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 250.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 250.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 244.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 244.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 244.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 243.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 243.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 242.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 240.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 240.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 236.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 231.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 227.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 225.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 224.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 224.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 223.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 222.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 222.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 221.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 219.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 219.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 216.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 213.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 211.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 210.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 209.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 207.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 205.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 205.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 204.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 204.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 204.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 204.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 203.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 200.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 200.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 200.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 199.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 199.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 198.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 198.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 196.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 195.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 191.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 189.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 189.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 189.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 187.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 187.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 182.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 181.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 181.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 181.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 178.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 175.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 175.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 175.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 170.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 168.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 168.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 168.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 167.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 165.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 165.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 159.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 159.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 157.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 157.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 156.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 154.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 154.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 154.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 152.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 151.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 151.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 149.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 147.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 147.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 147.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 144.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 144.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 144.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 143.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 143.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 142.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 141.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 140.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 139.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 139.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 139.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 138.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 138.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 137.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 136.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 136.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 134.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 133.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 133.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 132.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 132.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 131.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 130.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 129.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 128.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 127.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 125.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 124.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 123.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 122.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 121.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 121.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 121.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 121.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 118.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 116.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 115.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 115.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 114.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 114.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 112.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 112.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 111.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 111.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 110.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 109.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 109.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 107.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 105.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 105.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 103.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 101.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 101.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 100.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 100.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 99.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 98.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 97.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 96.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 95.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 95.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 95.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 94.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 93.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 92.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 92.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 91.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 89.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 89.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 89.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 88.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 88.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 86.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 83.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 83.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 80.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 79.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 79.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 78.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 77.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 77.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 76.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 74.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 72.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 71.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 70.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 69.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 65.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 65.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 63.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 59.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 57.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 55.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 54.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 54.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 53.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 52.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 50.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 49.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 48.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 46.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 37.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 26.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 24.2
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 207.9
Samples: 246

Max nTPM: 2544.4
Min nTPM: 12.9
Std nTPM: 290.9
Median nTPM: 122.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 2544.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 2044.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1668.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1488.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1262.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 948.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 873.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 851.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 819.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 795.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 788.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 756.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 730.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 722.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 693.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 632.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 630.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 531.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 512.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 495.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 473.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 428.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 428.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 425.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 417.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 413.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 409.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 407.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 402.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 357.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 354.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 337.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 336.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 326.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 308.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 294.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 287.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 286.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 282.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 282.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 280.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 280.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 277.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 267.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 257.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 247.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 240.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 239.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 238.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 236.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 234.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 232.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 231.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 228.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 225.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 216.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 214.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 214.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 208.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 204.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 203.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 199.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 195.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 190.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 188.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 188.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 187.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 187.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 186.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 177.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 173.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 173.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 173.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 170.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 169.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 168.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 165.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 161.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 161.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 158.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 157.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 157.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 156.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 153.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 152.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 151.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 149.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 149.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 148.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 148.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 147.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 147.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 146.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 145.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 145.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 145.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 144.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 144.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 143.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 142.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 140.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 140.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 138.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 137.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 136.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 135.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 134.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 132.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 132.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 132.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 131.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 130.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 129.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 129.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 129.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 128.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 127.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 127.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 126.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 125.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 123.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 123.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 122.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 121.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 121.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 121.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 120.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 117.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 117.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 117.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 116.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 116.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 116.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 115.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 115.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 115.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 115.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 114.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 114.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 112.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 110.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 109.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 109.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 105.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 104.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 103.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 103.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 103.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 102.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 101.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 101.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 101.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 101.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 100.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 100.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 100.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 100.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 99.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 99.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 99.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 98.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 96.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 95.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 92.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 92.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 92.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 91.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 91.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 91.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 89.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 89.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 89.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 88.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 87.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 87.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 87.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 86.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 86.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 85.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 83.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 83.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 83.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 82.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 81.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 81.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 80.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 79.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 79.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 78.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 78.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 78.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 78.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 77.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 76.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 76.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 74.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 73.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 73.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 72.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 70.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 69.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 66.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 66.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 65.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 65.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 64.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 64.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 64.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 63.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 62.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 62.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 61.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 61.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 59.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 57.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 56.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 56.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 55.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 54.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 54.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 54.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 54.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 54.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 54.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 51.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 51.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 49.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 48.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 44.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 44.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 44.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 43.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 41.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 41.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 40.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 39.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 39.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 38.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 38.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 37.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 36.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 35.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 34.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 31.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 25.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 12.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 292.7
Samples: 205

Max nTPM: 4374.9
Min nTPM: 33.5
Std nTPM: 360.1
Median nTPM: 217.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4374.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1487.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1348.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1248.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1166.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1112.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 939.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 933.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 702.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 696.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 686.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 664.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 660.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 629.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 620.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 592.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 579.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 552.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 527.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 475.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 474.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 466.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 463.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 461.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 451.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 450.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 439.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 428.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 397.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 394.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 386.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 386.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 385.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 378.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 376.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 376.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 360.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 359.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 350.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 346.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 344.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 341.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 341.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 341.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 339.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 326.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 324.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 323.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 318.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 317.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 316.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 316.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 313.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 310.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 310.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 305.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 303.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 303.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 302.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 302.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 299.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 294.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 292.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 282.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 280.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 279.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 276.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 274.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 271.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 265.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 265.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 263.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 262.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 261.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 261.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 260.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 259.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 253.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 252.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 251.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 251.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 250.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 249.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 248.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 248.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 243.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 241.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 240.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 240.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 240.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 235.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 232.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 230.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 229.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 228.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 225.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 224.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 222.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 222.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 222.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 222.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 220.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 217.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 216.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 215.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 210.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 208.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 207.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 206.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 206.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 205.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 204.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 204.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 201.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 201.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 200.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 199.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 198.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 197.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 196.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 195.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 193.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 193.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 193.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 192.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 191.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 189.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 188.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 188.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 185.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 184.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 183.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 183.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 182.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 180.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 179.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 179.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 176.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 175.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 174.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 170.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 170.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 166.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 165.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 163.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 160.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 159.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 158.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 156.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 155.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 154.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 153.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 150.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 149.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 146.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 140.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 140.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 139.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 139.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 138.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 137.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 136.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 136.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 130.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 130.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 127.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 127.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 124.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 122.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 122.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 116.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 114.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 112.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 111.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 111.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 111.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 107.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 107.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 105.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 105.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 103.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 100.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 100.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 100.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 99.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 99.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 96.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 93.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 92.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 91.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 90.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 90.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 88.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 83.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 77.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 76.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 70.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 69.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 68.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 63.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 58.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 48.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 48.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 39.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 33.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2109.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 438.0
FF:10164-103B2 76 years, female 438.0
Nucleus accumbens
Scaled Tags Per Million: 366.9
FF:10037-101F1 23-56 years, mixed 366.9
Putamen
Scaled Tags Per Million: 496.6
FF:10176-103C5 60 years, female 496.6
Globus pallidus
Scaled Tags Per Million: 2109.1
FF:10175-103C4 60 years, female 2112.6
FF:10161-103A8 76 years, female 2105.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.9
Pig sample Sample description nTPM
Caudate
nTPM: 79.7
Samples: 4

Max nTPM: 86.6
Min nTPM: 72.7
Sample A Female 85.9
Sample B Female 73.5
Sample C Male 86.6
Sample D Male 72.7
Putamen
nTPM: 268.9
Samples: 4

Max nTPM: 468.8
Min nTPM: 128.7
Sample A Female 468.8
Sample B Female 128.7
Sample C Male 216.4
Sample D Male 261.7
Septum
nTPM: 151.5
Samples: 4

Max nTPM: 176.5
Min nTPM: 117.6
Sample A Female 154.2
Sample B Female 117.6
Sample C Male 157.6
Sample D Male 176.5
Ventral pallidum
nTPM: 194.0
Samples: 4

Max nTPM: 268.1
Min nTPM: 104.5
Sample A Female 104.5
Sample B Female 187.0
Sample C Male 268.1
Sample D Male 216.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 11.8
Samples: 4

Max nTPM: 19.6
Min nTPM: 5.4
Sample A Male 19.6
Sample B Male 10.0
Sample C Female 12.0
Sample D Female 5.4
Septum
nTPM: 24.0
Samples: 4

Max nTPM: 29.4
Min nTPM: 20.7
Sample A Male 20.7
Sample B Male 29.4
Sample C Female 22.7
Sample D Female 23.0
Ventral forebrain
nTPM: 25.0
Samples: 4

Max nTPM: 37.7
Min nTPM: 16.6
Sample A Male 16.6
Sample B Male 26.8
Sample C Female 37.7
Sample D Female 18.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.1
513488 Antisense, RP_040810_01_H07, Mouse strain C57BL/6J (56 days, male) 1.6
69015350 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 0.9
75651180 Antisense, RP_060518_01_C06, Mouse strain C57BL/6J (56 days, male) 0.8
70436740 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 2.5
513488 Antisense, RP_040810_01_H07, Mouse strain C57BL/6J (56 days, male) 3.0
69015350 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 2.5
75651180 Antisense, RP_060518_01_C06, Mouse strain C57BL/6J (56 days, male) 2.1
70436740 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 1.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org