PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1537.0 nTPM
FANTOM5:2133.4 Scaled Tags Per Million
Pig:593.3 nTPM
Mouse:317.0 nTPM
Allen mouse:8.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1537.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 823.0
2188 Female, age 91, both hemispheres 983.2
2090 Male, age 80, both hemispheres 952.0
2301 Female, age 85, both hemispheres 891.7
1984 Male, age 76, both hemispheres 464.9
Area postrema
nTPM: 487.9
2306 Male, age 80, both hemispheres 715.7
2054 Male, age 76, both hemispheres 419.3
2799 Male, age 61, both hemispheres 328.9
Dorsal cochlear nucleus
nTPM: 832.6
2370 Male, age 61, both hemispheres 1700.6
2187 Female, age 91, both hemispheres 829.7
2378 Male, age 80, both hemispheres 748.9
2802 Male, age 74, right hemisphere 448.9
2058 Male, age 76, both hemispheres 435.0
Dorsal medullary reticular nucleus
nTPM: 656.1
2373 Male, age 61, both hemispheres 775.3
2040 Female, age 85, both hemispheres 733.9
2088 Male, age 76, both hemispheres 459.0
Dorsal motor vagal complex
nTPM: 403.1
2807 Female, age 85, both hemispheres 624.3
2000 Male, age 74, unknown 538.4
2133 Female, age 91, both hemispheres 519.9
2185 Male, age 76, both hemispheres 449.0
2813 Female, age 72, unknown 424.0
2643 Male, age 74, both hemispheres 286.2
2844 Male, age 55, unknown 271.0
2797 Male, age 61, both hemispheres 111.8
Dorsal tegmental nucleus
nTPM: 1537.0
2358 Male, age 61, both hemispheres 4353.2
2083 Male, age 80, both hemispheres 768.8
2326 Male, age 74, both hemispheres 637.1
1936 Male, age 76, left hemisphere 388.8
Dorsolateral tegmental area
nTPM: 1033.3
2337 Male, age 61, both hemispheres 2846.8
2654 Male, age 80, both hemispheres 772.2
2751 Female, age 85, both hemispheres 743.9
2360 Male, age 74, both hemispheres 549.9
2141 Male, age 76, both hemispheres 253.7
Gigantocellular reticular nuclei, medullary
nTPM: 593.7
1876 Female, age 85, both hemispheres 777.2
2387 Female, age 91, both hemispheres 679.4
2310 Male, age 80, both hemispheres 643.5
2314 Male, age 61, both hemispheres 552.6
2462 Male, age 74, both hemispheres 531.1
2022 Male, age 76, right hemisphere 378.1
Gigantocellular reticular nuclei, pars
nTPM: 638.0
2336 Male, age 61, both hemispheres 858.4
2706 Male, age 80, both hemispheres 724.1
2330 Male, age 80, both hemispheres 680.1
2084 Female, age 85, both hemispheres 574.6
2168 Male, age 76, both hemispheres 353.1
Inferior olive
nTPM: 841.7
2178 Male, age 61, both hemispheres 974.0
2628 Female, age 91, both hemispheres 941.5
2563 Male, age 74, both hemispheres 868.4
2379 Male, age 80, both hemispheres 716.4
2085 Female, age 85, both hemispheres 708.1
Kolliker-Fuse nucleus
nTPM: 851.7
2793 Female, age 91, left hemisphere 1232.7
2163 Male, age 80, both hemispheres 856.7
2315 Male, age 76, right hemisphere 465.7
Lateral lemniscal nuclei
nTPM: 681.2
2746 Female, age 85, left hemisphere 1011.8
2320 Female, age 91, left hemisphere 703.8
2453 Male, age 74, right hemisphere 664.3
2036 Male, age 80, both hemispheres 608.6
2169 Male, age 76, both hemispheres 417.8
Lateral medullary reticular nucleus
nTPM: 1111.3
2305 Male, age 74, both hemispheres 1870.9
2374 Male, age 61, both hemispheres 1328.8
2852 Male, age 80, both hemispheres 1141.8
2190 Female, age 85, both hemispheres 823.0
2044 Male, age 76, both hemispheres 773.3
2804 Female, age 91, both hemispheres 730.0
Lateral parabrachial nucleus
nTPM: 856.8
2790 Male, age 61, both hemispheres 1009.9
2792 Male, age 76, both hemispheres 899.8
2013 Male, age 80, both hemispheres 803.7
2139 Female, age 85, right hemisphere 713.9
Lateral vestibular nucleus
nTPM: 706.2
2311 Male, age 80, both hemispheres 754.3
2184 Male, age 76, both hemispheres 658.1
Locus coeruleus
nTPM: 288.8
2162 Male, age 80, both hemispheres 413.3
2123 Female, age 91, both hemispheres 378.4
2720 Male, age 74, both hemispheres 362.1
2788 Male, age 74, unknown 252.8
2317 Female, age 72, unknown 250.7
1980 Male, age 76, both hemispheres 187.0
2014 Male, age 55, unknown 177.4
Medial olivary nucleus
nTPM: 1288.6
1943 Male, age 61, both hemispheres 2240.2
2851 Male, age 80, both hemispheres 1121.8
1962 Male, age 76, both hemispheres 1043.5
2138 Female, age 91, both hemispheres 749.1
Medial parabrachial nucleus
nTPM: 831.3
2156 Male, age 61, both hemispheres 1059.1
2854 Male, age 80, both hemispheres 1012.2
2170 Female, age 91, both hemispheres 899.4
2463 Female, age 85, right hemisphere 648.2
2786 Male, age 76, both hemispheres 537.7
Medial periolivary nuclei
nTPM: 802.6
2081 Male, age 80, both hemispheres 1286.0
2791 Male, age 74, right hemisphere 861.4
2458 Female, age 91, both hemispheres 833.2
2171 Female, age 85, both hemispheres 590.2
2063 Male, age 76, both hemispheres 442.0
Medial vestibular nucleus
nTPM: 984.3
2624 Male, age 61, both hemispheres 2379.7
2801 Male, age 74, both hemispheres 1183.2
2093 Male, age 80, both hemispheres 733.6
2803 Female, age 91, both hemispheres 723.2
2743 Female, age 85, both hemispheres 474.3
2134 Male, age 76, both hemispheres 412.0
Motor facial nucleus
nTPM: 669.0
2365 Male, age 74, right hemisphere 1230.5
2697 Female, age 85, both hemispheres 956.6
2126 Male, age 61, both hemispheres 650.7
2795 Female, age 91, both hemispheres 428.1
2327 Male, age 80, both hemispheres 396.1
2062 Male, age 76, both hemispheres 352.3
Motor hypoglossal nucleus
nTPM: 793.7
2461 Male, age 61, both hemispheres 1072.2
2132 Female, age 85, both hemispheres 1018.0
2182 Male, age 80, both hemispheres 966.7
2125 Female, age 91, both hemispheres 711.4
2277 Male, age 76, both hemispheres 200.2
Motor trigeminal nucleus
nTPM: 822.6
2335 Male, age 61, both hemispheres 1411.4
2560 Male, age 74, both hemispheres 834.8
2321 Female, age 91, both hemispheres 738.5
2079 Male, age 80, both hemispheres 678.8
2309 Male, age 76, both hemispheres 449.5
Nuclei of the trapezoid body
nTPM: 467.2
2166 Male, age 80, both hemispheres 688.0
2368 Female, age 91, both hemispheres 527.7
1983 Male, age 76, both hemispheres 468.0
2735 Female, age 85, both hemispheres 412.0
2159 Male, age 61, both hemispheres 240.3
Nucleus ambiguus
nTPM: 700.9
2071 Male, age 76, both hemispheres 872.4
2096 Female, age 85, both hemispheres 529.5
Nucleus cuneatus
nTPM: 684.4
2808 Female, age 85, both hemispheres 1247.8
2380 Male, age 80, both hemispheres 876.6
2381 Male, age 80, both hemispheres 842.7
2564 Male, age 74, both hemispheres 646.8
2376 Male, age 61, both hemispheres 629.8
2131 Male, age 76, both hemispheres 606.9
2100 Male, age 76, both hemispheres 576.2
2562 Male, age 61, both hemispheres 377.3
2805 Female, age 91, both hemispheres 355.2
Nucleus gracilis
nTPM: 970.9
2627 Male, age 74, both hemispheres 1019.5
2382 Male, age 80, both hemispheres 974.6
2299 Female, age 85, both hemispheres 918.7
Nucleus raphe magnus
nTPM: 614.7
2051 Male, age 76, both hemispheres 822.8
2455 Male, age 74, both hemispheres 763.7
2459 Female, age 91, both hemispheres 730.9
2328 Male, age 80, both hemispheres 531.5
2172 Female, age 85, both hemispheres 473.2
2160 Male, age 61, both hemispheres 366.1
Nucleus raphe obscurus
nTPM: 851.8
2845 Female, age 85, midline 1050.6
2142 Male, age 76, midline 875.9
2800 Male, age 61, midline 628.8
Nucleus raphe pallidus
nTPM: 1455.3
1924 Male, age 61, midline 2529.7
2145 Male, age 76, midline 956.8
2183 Male, age 80, midline 879.3
Nucleus tractus solitarii
nTPM: 366.8
2191 Female, age 85, both hemispheres 491.6
2144 Female, age 91, right hemisphere 468.2
2307 Male, age 80, both hemispheres 289.2
2656 Male, age 76, both hemispheres 218.0
Paramedian reticular nucleus
nTPM: 826.9
2313 Male, age 61, both hemispheres 1115.2
2052 Male, age 76, both hemispheres 798.7
2050 Female, age 85, both hemispheres 767.8
2057 Male, age 80, both hemispheres 626.0
Parvicellular reticular nuclei
nTPM: 663.5
2119 Male, age 80, both hemispheres 712.6
2095 Male, age 76, both hemispheres 659.1
2558 Male, age 74, both hemispheres 618.8
Parvicellular reticular nuclei, medullary
nTPM: 574.0
2091 Female, age 85, both hemispheres 698.8
2189 Female, age 91, both hemispheres 583.6
2181 Male, age 80, left hemisphere 439.6
Pedunculopontine tegmental nucleus
nTPM: 1099.8
2338 Male, age 61, both hemispheres 2342.1
2334 Male, age 80, both hemispheres 576.7
1921 Female, age 85, both hemispheres 380.6
Peritrigeminal nucleus
nTPM: 1098.5
2179 Male, age 61, both hemispheres 1248.5
2067 Female, age 85, both hemispheres 1160.8
2136 Male, age 76, both hemispheres 886.2
Pontine nuclei
nTPM: 853.2
2115 Male, age 80, left hemisphere 1674.4
2454 Male, age 74, left hemisphere 1040.3
2319 Female, age 91, both hemispheres 974.9
2109 Female, age 72, unknown 896.1
1863 Male, age 55, unknown 720.8
2787 Female, age 85, both hemispheres 675.0
2727 Male, age 61, right hemisphere 443.7
1968 Male, age 76, left hemisphere 400.8
Pontine raphe nucleus
nTPM: 365.3
2122 Female, age 85, midline 438.8
2853 Male, age 76, midline 291.8
Posteroventral cochlear nucleus
nTPM: 1065.8
2371 Male, age 61, both hemispheres 1750.2
2341 Male, age 80, both hemispheres 1315.6
2135 Female, age 91, both hemispheres 1088.0
2070 Male, age 76, both hemispheres 648.8
2752 Female, age 85, both hemispheres 526.4
Prepositus hypoglossal nucleus
nTPM: 700.7
2855 Female, age 85, right hemisphere 877.1
2086 Male, age 80, both hemispheres 524.4
Principal sensory trigeminal nucleus
nTPM: 642.4
2367 Female, age 91, left hemisphere 1110.4
2324 Male, age 76, both hemispheres 571.1
2008 Male, age 80, left hemisphere 468.4
2158 Male, age 61, both hemispheres 419.7
Reticular pontine nucleus, caudal
nTPM: 679.6
2559 Male, age 74, both hemispheres 909.4
2457 Female, age 91, both hemispheres 803.2
2092 Male, age 76, both hemispheres 560.3
2332 Male, age 80, right hemisphere 445.5
Reticular pontine nucleus, oral
nTPM: 800.0
2361 Male, age 74, both hemispheres 1342.9
2366 Female, age 91, both hemispheres 891.1
1939 Male, age 80, both hemispheres 624.0
2012 Female, age 85, both hemispheres 607.2
2167 Male, age 76, both hemispheres 534.8
Reticulotegmental nucleus
nTPM: 562.9
2333 Male, age 80, both hemispheres 657.9
2322 Female, age 91, both hemispheres 631.2
2452 Male, age 74, both hemispheres 547.1
2325 Male, age 76, both hemispheres 415.6
Spinal trigeminal nucleus, caudal
nTPM: 634.8
2390 Female, age 91, both hemispheres 745.7
2308 Male, age 80, both hemispheres 690.6
2312 Male, age 61, both hemispheres 621.5
2642 Male, age 74, both hemispheres 562.9
2447 Male, age 76, both hemispheres 553.5
Spinal trigeminal nucleus, interpolar
nTPM: 961.6
2625 Male, age 61, both hemispheres 2028.7
2386 Female, age 85, both hemispheres 780.4
2033 Male, age 80, both hemispheres 778.6
2389 Female, age 91, both hemispheres 642.3
2066 Male, age 76, right hemisphere 578.0
Spinal trigeminal nucleus, oral
nTPM: 552.9
2164 Male, age 80, both hemispheres 744.6
2737 Female, age 85, both hemispheres 519.6
1978 Male, age 76, both hemispheres 394.5
Spinal vestibular nucleus
nTPM: 1006.0
2796 Male, age 61, both hemispheres 2847.5
2806 Female, age 85, both hemispheres 801.5
2748 Male, age 76, both hemispheres 688.2
2186 Female, age 91, both hemispheres 585.6
2780 Male, age 80, both hemispheres 582.3
2384 Male, age 74, both hemispheres 531.0
Subcoeruleus area
nTPM: 537.7
2369 Female, age 85, left hemisphere 911.2
1958 Male, age 80, both hemispheres 600.6
2451 Male, age 74, both hemispheres 415.5
2089 Male, age 76, left hemisphere 388.2
2323 Female, age 91, left hemisphere 372.8
Superior olive
nTPM: 768.3
2364 Male, age 74, right hemisphere 1104.8
2561 Female, age 91, both hemispheres 904.3
2020 Male, age 76, both hemispheres 649.9
2329 Male, age 80, right hemisphere 597.6
1875 Female, age 85, both hemispheres 585.1
Superior vestibular nucleus
nTPM: 570.4
2015 Male, age 80, both hemispheres 675.9
2383 Male, age 74, both hemispheres 583.8
2061 Male, age 76, both hemispheres 451.3
Ventral medullary reticular nucleus
nTPM: 581.5
2060 Male, age 76, both hemispheres 605.7
2372 Male, age 61, both hemispheres 557.3
Ventral periolivary nuclei
nTPM: 650.1
2023 Male, age 76, both hemispheres 746.9
2794 Female, age 91, left hemisphere 682.8
2165 Male, age 80, both hemispheres 632.8
2130 Female, age 85, both hemispheres 538.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 874.8
2180 Male, age 61, both hemispheres 1135.3
2118 Male, age 80, both hemispheres 986.1
2741 Female, age 85, both hemispheres 788.3
1986 Male, age 76, both hemispheres 773.1
2302 Female, age 91, both hemispheres 691.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 878.8
2359 Male, age 61, both hemispheres 1148.4
2840 Female, age 85, both hemispheres 1088.1
2161 Male, age 80, both hemispheres 994.9
2449 Male, age 74, both hemispheres 843.4
2456 Female, age 91, both hemispheres 664.2
1959 Male, age 76, both hemispheres 533.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 2133.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 2133.4
FF:10165-103B3 76 years, female 2514.4
FF:10182-103D2 60 years, female 1752.3
Medulla oblongata
Scaled Tags Per Million: 1892.1
FF:10155-103A2 76 years, female 2277.5
FF:10174-103C3 60 years, female 1855.0
FF:10038-101F2 18-64 years, mixed 1543.7
Pons
Scaled Tags Per Million: 1644.4
FF:10033-101E6 18-54 years, mixed 1644.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 593.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 593.3
Samples: 4

Max nTPM: 720.4
Min nTPM: 513.2
Sample A Female 720.4
Sample B Female 513.2
Sample C Male 529.6
Sample D Male 610.1
Pons
nTPM: 325.6
Samples: 4

Max nTPM: 530.1
Min nTPM: 233.5
Sample A Female 233.5
Sample B Female 242.8
Sample C Male 295.8
Sample D Male 530.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 317.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 317.0
Samples: 4

Max nTPM: 340.2
Min nTPM: 264.2
Sample A Male 264.2
Sample B Male 340.2
Sample C Female 328.5
Sample D Female 335.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 8.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.4
513488 Antisense, RP_040810_01_H07, Mouse strain C57BL/6J (56 days, male) 8.9
69015350 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 8.5
75651180 Antisense, RP_060518_01_C06, Mouse strain C57BL/6J (56 days, male) 7.8
70436740 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 5.7
Pons
Expression energy: 8.5
513488 Antisense, RP_040810_01_H07, Mouse strain C57BL/6J (56 days, male) 10.8
69015350 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 7.6
75651180 Antisense, RP_060518_01_C06, Mouse strain C57BL/6J (56 days, male) 7.1
70436740 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 6.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org