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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
354.6
nTPM
FANTOM5:
27.7
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
354.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 343.2
2188
Female, age 91, both hemispheres
392.7
2301
Female, age 85, both hemispheres
351.9
2090
Male, age 80, both hemispheres
344.7
1984
Male, age 76, both hemispheres
283.3
Dorsal cochlear nucleus nTPM: 322.0
2802
Male, age 74, right hemisphere
379.2
2187
Female, age 91, both hemispheres
357.2
2378
Male, age 80, both hemispheres
330.9
2370
Male, age 61, both hemispheres
296.8
2058
Male, age 76, both hemispheres
246.2
Dorsal tegmental nucleus nTPM: 320.1
2358
Male, age 61, both hemispheres
362.9
2326
Male, age 74, both hemispheres
348.5
2083
Male, age 80, both hemispheres
339.9
1936
Male, age 76, left hemisphere
229.2
Dorsolateral tegmental area nTPM: 316.0
2654
Male, age 80, both hemispheres
398.7
2751
Female, age 85, both hemispheres
347.3
2337
Male, age 61, both hemispheres
331.6
2141
Male, age 76, both hemispheres
260.6
2360
Male, age 74, both hemispheres
241.6
Kolliker-Fuse nucleus nTPM: 354.6
2793
Female, age 91, left hemisphere
394.7
2315
Male, age 76, right hemisphere
385.7
2163
Male, age 80, both hemispheres
283.2
Lateral lemniscal nuclei nTPM: 240.9
2169
Male, age 76, both hemispheres
285.3
2320
Female, age 91, left hemisphere
263.2
2453
Male, age 74, right hemisphere
234.9
2746
Female, age 85, left hemisphere
234.4
2036
Male, age 80, both hemispheres
186.6
Lateral parabrachial nucleus nTPM: 336.9
2792
Male, age 76, both hemispheres
468.5
2013
Male, age 80, both hemispheres
325.3
2790
Male, age 61, both hemispheres
300.8
2139
Female, age 85, right hemisphere
252.9
Lateral vestibular nucleus nTPM: 315.3
2311
Male, age 80, both hemispheres
374.1
2184
Male, age 76, both hemispheres
256.4
Locus coeruleus nTPM: 267.4
2720
Male, age 74, both hemispheres
371.3
2788
Male, age 74, unknown
320.6
2162
Male, age 80, both hemispheres
274.8
2123
Female, age 91, both hemispheres
250.7
2317
Female, age 72, unknown
235.0
2014
Male, age 55, unknown
211.7
1980
Male, age 76, both hemispheres
208.0
Medial parabrachial nucleus nTPM: 337.5
2170
Female, age 91, both hemispheres
432.0
2854
Male, age 80, both hemispheres
395.5
2786
Male, age 76, both hemispheres
301.7
2463
Female, age 85, right hemisphere
280.4
2156
Male, age 61, both hemispheres
278.0
Medial periolivary nuclei nTPM: 257.4
2458
Female, age 91, both hemispheres
286.9
2063
Male, age 76, both hemispheres
275.2
2081
Male, age 80, both hemispheres
268.0
2791
Male, age 74, right hemisphere
246.1
2171
Female, age 85, both hemispheres
210.7
Motor facial nucleus nTPM: 278.5
2697
Female, age 85, both hemispheres
383.0
2795
Female, age 91, both hemispheres
347.2
2126
Male, age 61, both hemispheres
253.8
2365
Male, age 74, right hemisphere
243.9
2062
Male, age 76, both hemispheres
232.1
2327
Male, age 80, both hemispheres
211.3
Motor trigeminal nucleus nTPM: 267.0
2321
Female, age 91, both hemispheres
292.2
2335
Male, age 61, both hemispheres
289.6
2309
Male, age 76, both hemispheres
287.7
2560
Male, age 74, both hemispheres
247.3
2079
Male, age 80, both hemispheres
218.0
Nuclei of the trapezoid body nTPM: 244.8
1983
Male, age 76, both hemispheres
300.6
2166
Male, age 80, both hemispheres
274.1
2368
Female, age 91, both hemispheres
250.3
2159
Male, age 61, both hemispheres
217.0
2735
Female, age 85, both hemispheres
181.9
Nucleus raphe magnus nTPM: 244.2
2459
Female, age 91, both hemispheres
282.2
2328
Male, age 80, both hemispheres
258.2
2051
Male, age 76, both hemispheres
252.5
2455
Male, age 74, both hemispheres
238.6
2172
Female, age 85, both hemispheres
218.7
2160
Male, age 61, both hemispheres
215.3
Paramedian reticular nucleus nTPM: 284.5
2052
Male, age 76, both hemispheres
361.3
2313
Male, age 61, both hemispheres
295.3
2057
Male, age 80, both hemispheres
250.5
2050
Female, age 85, both hemispheres
231.2
Pedunculopontine tegmental nucleus nTPM: 323.8
2338
Male, age 61, both hemispheres
390.0
2334
Male, age 80, both hemispheres
365.1
1921
Female, age 85, both hemispheres
216.3
Pontine nuclei nTPM: 253.0
2319
Female, age 91, both hemispheres
340.9
2454
Male, age 74, left hemisphere
281.4
1968
Male, age 76, left hemisphere
243.3
2109
Female, age 72, unknown
243.1
2787
Female, age 85, both hemispheres
241.9
1863
Male, age 55, unknown
240.4
2115
Male, age 80, left hemisphere
227.0
2727
Male, age 61, right hemisphere
205.7
Pontine raphe nucleus nTPM: 284.2
2853
Male, age 76, midline
307.3
2122
Female, age 85, midline
261.0
Posteroventral cochlear nucleus nTPM: 347.7
2341
Male, age 80, both hemispheres
448.3
2135
Female, age 91, both hemispheres
370.4
2371
Male, age 61, both hemispheres
355.9
2752
Female, age 85, both hemispheres
288.5
2070
Male, age 76, both hemispheres
275.2
Principal sensory trigeminal nucleus nTPM: 240.7
2367
Female, age 91, left hemisphere
294.7
2324
Male, age 76, both hemispheres
270.9
2158
Male, age 61, both hemispheres
217.7
2008
Male, age 80, left hemisphere
179.5
Reticular pontine nucleus, caudal nTPM: 294.9
2457
Female, age 91, both hemispheres
357.6
2559
Male, age 74, both hemispheres
310.2
2092
Male, age 76, both hemispheres
306.1
2332
Male, age 80, right hemisphere
205.6
Reticular pontine nucleus, oral nTPM: 300.8
2366
Female, age 91, both hemispheres
403.0
2167
Male, age 76, both hemispheres
334.0
1939
Male, age 80, both hemispheres
264.7
2361
Male, age 74, both hemispheres
259.2
2012
Female, age 85, both hemispheres
243.2
Reticulotegmental nucleus nTPM: 295.6
2322
Female, age 91, both hemispheres
321.1
2452
Male, age 74, both hemispheres
305.6
2333
Male, age 80, both hemispheres
290.1
2325
Male, age 76, both hemispheres
265.6
Spinal trigeminal nucleus, oral nTPM: 273.5
2164
Male, age 80, both hemispheres
292.6
1978
Male, age 76, both hemispheres
277.7
2737
Female, age 85, both hemispheres
250.2
Subcoeruleus area nTPM: 288.7
2451
Male, age 74, both hemispheres
352.0
2369
Female, age 85, left hemisphere
344.8
2323
Female, age 91, left hemisphere
273.4
1958
Male, age 80, both hemispheres
249.9
2089
Male, age 76, left hemisphere
223.2
Superior olive nTPM: 244.5
2020
Male, age 76, both hemispheres
294.8
2561
Female, age 91, both hemispheres
285.8
2329
Male, age 80, right hemisphere
237.5
2364
Male, age 74, right hemisphere
215.4
1875
Female, age 85, both hemispheres
189.1
Ventral periolivary nuclei nTPM: 271.9
2794
Female, age 91, left hemisphere
309.3
2023
Male, age 76, both hemispheres
293.3
2165
Male, age 80, both hemispheres
273.3
2130
Female, age 85, both hemispheres
211.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 279.2
2840
Female, age 85, both hemispheres
351.0
2161
Male, age 80, both hemispheres
293.4
2359
Male, age 61, both hemispheres
287.8
2456
Female, age 91, both hemispheres
275.9
1959
Male, age 76, both hemispheres
239.2
2449
Male, age 74, both hemispheres
227.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
