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  • RPL21
BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:392.9 nTPM
FANTOM5:22.1 Scaled Tags Per Million

THALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

392.9
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 264.9
2396 Male, age 61, right hemisphere 317.3
2497 Male, age 66, unknown 254.1
2032 Female, age 42, unknown 223.2
Centromedial thalamic nucleus
nTPM: 267.4
2279 Female, age 85, left hemisphere 308.8
2401 Male, age 76, right hemisphere 226.0
Habenula
nTPM: 219.8
1957 Male, age 80, both hemispheres 242.0
2203 Male, age 61, left hemisphere 240.7
2252 Male, age 62, unknown 212.3
2276 Male, age 66, unknown 184.1
Lateral geniculate body
nTPM: 262.7
2857 Male, age 74, right hemisphere 363.9
2575 Female, age 94, right hemisphere 310.0
2841 Male, age 80, both hemispheres 309.2
2659 Male, age 66, unknown 265.0
1953 Male, age 62, unknown 234.8
2399 Male, age 61, left hemisphere 229.6
2035 Female, age 72, unknown 201.3
2106 Female, age 67, right hemisphere 188.1
Lateral thalamic nuclei
nTPM: 273.1
2661 Female, age 72, unknown 334.2
2765 Female, age 67, both hemispheres 295.8
2577 Male, age 74, both hemispheres 281.2
2573 Female, age 94, left hemisphere 269.5
1903 Male, age 76, left hemisphere 184.8
Medial dorsal thalamic nucleus
nTPM: 247.3
2572 Female, age 94, right hemisphere 428.1
2660 Female, age 72, unknown 285.3
1810 Male, age 48, unknown 263.3
1930 Female, age 42, unknown 259.5
2039 Female, age 72, unknown 254.1
2576 Male, age 74, both hemispheres 249.8
2492 Male, age 75, right hemisphere 229.6
2498 Male, age 66, unknown 224.0
2402 Female, age 67, both hemispheres 223.6
1971 Male, age 61, right hemisphere 214.5
2283 Male, age 80, right hemisphere 200.8
2026 Male, age 62, unknown 191.8
1859 Male, age 76, both hemispheres 190.8
Medial geniculate body
nTPM: 288.9
2571 Male, age 75, right hemisphere 363.8
2650 Female, age 94, left hemisphere 308.9
2217 Female, age 72, unknown 284.3
2049 Male, age 76, both hemispheres 276.2
2207 Male, age 80, right hemisphere 275.6
2657 Male, age 74, right hemisphere 262.7
1811 Female, age 42, unknown 251.0
Nucleus reuniens
nTPM: 325.9
2210 Female, age 85, left hemisphere 372.5
2205 Male, age 80, left hemisphere 331.8
2212 Female, age 67, left hemisphere 273.3
Nucleus rhomboideus
nTPM: 281.5
2280 Female, age 85, left hemisphere 307.0
2213 Female, age 67, left hemisphere 286.4
2206 Male, age 80, both hemispheres 251.2
Posterior thalamic nucleus
nTPM: 392.9
2649 Female, age 94, both hemispheres 729.6
2655 Male, age 74, right hemisphere 357.4
2266 Male, age 76, right hemisphere 247.1
2495 Female, age 67, right hemisphere 237.2
Pulvinar
nTPM: 240.2
2724 Male, age 74, right hemisphere 324.1
2496 Female, age 67, right hemisphere 280.2
2499 Male, age 66, unknown 261.7
2214 Male, age 76, right hemisphere 248.5
1972 Male, age 62, unknown 238.1
1929 Male, age 48, unknown 227.6
2398 Male, age 61, left hemisphere 226.6
2582 Female, age 72, unknown 222.9
1932 Male, age 80, right hemisphere 206.7
1899 Female, age 42, unknown 165.8
Subthalamic nucleus
nTPM: 286.8
2124 Male, age 62, unknown 343.3
2216 Male, age 48, unknown 308.5
2056 Female, age 72, unknown 305.6
2779 Female, age 42, unknown 294.6
2658 Male, age 74, both hemispheres 290.5
2275 Male, age 66, unknown 273.4
2282 Male, age 61, both hemispheres 264.6
2406 Female, age 72, unknown 214.2
Ventral posterolateral thalamic nucleus
nTPM: 230.8
2578 Male, age 74, both hemispheres 276.3
2197 Male, age 80, both hemispheres 260.1
2397 Male, age 61, right hemisphere 229.6
2570 Male, age 75, right hemisphere 216.8
2740 Male, age 76, right hemisphere 213.6
2581 Female, age 72, unknown 188.1
Ventral posteromedial thalamic nucleus
nTPM: 233.8
2653 Male, age 74, both hemispheres 276.9
2127 Male, age 76, right hemisphere 247.4
2202 Male, age 61, left hemisphere 229.1
2281 Male, age 75, right hemisphere 209.0
2758 Male, age 80, both hemispheres 206.6
Ventral thalamic nuclei
nTPM: 274.5
2291 Female, age 72, unknown 320.3
2652 Male, age 74, left hemisphere 305.0
2580 Male, age 66, unknown 301.8
2204 Male, age 80, both hemispheres 276.6
2285 Male, age 62, unknown 275.3
2858 Female, age 72, unknown 261.3
1912 Female, age 42, unknown 258.1
1845 Male, age 48, unknown 240.6
1860 Male, age 76, both hemispheres 231.9
Zona incerta
nTPM: 298.5
2403 Male, age 62, unknown 354.1
2822 Male, age 74, right hemisphere 316.8
2215 Male, age 66, unknown 298.6
2663 Female, age 72, unknown 278.1
2208 Male, age 80, right hemisphere 244.9

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

22.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 22.1
FF:10154-103A1 76 years, female 22.1

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