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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Medium
Hepatocytes: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:489.0 nTPM
HPA:489.0 nTPM
GTEx:422.7 nTPM
FANTOM5:217.9 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008587
Cholangiocytes Medium
Hepatocytes Low



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

489.0
N/A
Female, age 60
Liver sample 21
nTPM: 404.4
overview
Male, age 54
Liver sample 23
nTPM: 402.7
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 446.1
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 557.4
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 652.7
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 485.6
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 458.2
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 599.5
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 537.9
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 345.1
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

422.7
GTEx sample id Sample description nTPM
Liver
Average nTPM: 422.7
Samples: 226

Max nTPM: 685.6
Min nTPM: 239.2
Std nTPM: 73.3
Median nTPM: 415.2
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 685.6
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 611.5
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 598.9
GTEX-14E7W-1526-SM-6871X 70-79 years, male 597.9
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 593.8
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 573.9
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 573.8
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 569.0
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 568.2
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 565.6
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 562.4
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 558.5
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 556.0
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 553.8
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 549.6
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 546.4
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 543.6
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 543.1
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 542.6
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 541.1
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 540.8
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 538.0
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 535.7
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 526.6
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 526.0
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 524.8
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 524.6
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 519.0
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 516.0
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 513.8
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 511.8
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 507.6
GTEX-14JG1-1626-SM-664NH 40-49 years, male 503.0
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 502.2
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 499.2
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 495.7
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 494.1
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 490.0
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 489.8
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 488.9
GTEX-QESD-2026-SM-447BI 20-29 years, male 487.9
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 480.7
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 480.3
GTEX-RU72-1426-SM-46MUF 50-59 years, female 480.2
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 475.6
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 475.2
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 475.2
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 473.8
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 472.9
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 469.4
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 467.4
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 466.6
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 465.3
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 464.5
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 461.6
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 460.2
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 459.9
GTEX-11ZUS-2526-SM-59872 30-39 years, male 459.0
GTEX-REY6-1226-SM-48FDR 60-69 years, male 457.8
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 457.7
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 455.3
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 455.1
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 454.0
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 452.3
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 451.2
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 450.3
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 450.2
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 449.7
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 449.6
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 449.1
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 448.2
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 447.9
GTEX-S32W-1926-SM-4AD63 50-59 years, female 446.0
GTEX-QEL4-1226-SM-447A4 50-59 years, male 443.7
GTEX-13112-1426-SM-5EGH8 50-59 years, male 443.6
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 443.5
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 442.4
GTEX-18465-1626-SM-7LG6N 50-59 years, male 441.4
GTEX-RN64-1826-SM-48FDV 50-59 years, male 441.1
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 440.2
GTEX-YECK-1926-SM-4W21H 60-69 years, male 440.2
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 439.4
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 439.3
GTEX-O5YV-0726-SM-EV798 60-69 years, female 439.3
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 439.2
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 439.1
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 437.9
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 437.2
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 436.2
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 436.1
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 432.2
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 430.8
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 430.1
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 429.6
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 427.2
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 426.9
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 426.4
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 426.0
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 425.9
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 424.7
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 423.4
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 423.0
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 422.7
GTEX-1399T-0826-SM-5IFES 60-69 years, male 422.0
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 421.3
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 420.8
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 420.6
GTEX-14PHX-0526-SM-664NW 50-59 years, male 420.2
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 418.4
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 417.3
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 417.1
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 417.0
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 415.5
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 415.0
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 414.8
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 414.0
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 413.4
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 413.3
GTEX-P78B-1326-SM-3P611 40-49 years, female 411.1
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 411.1
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 409.7
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 409.2
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 408.6
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 408.5
GTEX-13113-1326-SM-5GCOI 60-69 years, female 407.9
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 407.8
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 407.8
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 407.3
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 407.0
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 406.4
GTEX-12696-0826-SM-5EGGE 60-69 years, male 405.1
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 404.3
GTEX-1B933-1226-SM-731DW 50-59 years, female 403.4
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 403.1
GTEX-18A66-2026-SM-7189C 60-69 years, male 402.2
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 401.7
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 400.8
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 400.1
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 399.1
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 399.0
GTEX-18A7A-1526-SM-72D69 50-59 years, female 398.8
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 398.0
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 397.0
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 394.5
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 394.4
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 393.8
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 393.8
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 393.7
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 392.9
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 392.9
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 391.9
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 391.2
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 390.9
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 388.9
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 388.7
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 388.3
GTEX-144GL-1426-SM-79OMA 50-59 years, male 387.8
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 387.4
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 383.9
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 383.7
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 382.4
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 381.9
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 380.7
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 380.6
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 377.7
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 376.7
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 376.5
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 372.1
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 371.2
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 369.0
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 368.7
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 368.7
GTEX-14PJO-1726-SM-68719 60-69 years, male 368.5
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 368.4
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 364.7
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 362.9
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 361.9
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 361.7
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 361.2
GTEX-X261-1726-SM-4PQYT 50-59 years, male 360.9
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 360.5
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 359.3
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 359.3
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 358.6
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 358.4
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 357.5
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 355.4
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 354.8
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 354.7
GTEX-S33H-1626-SM-4AD68 30-39 years, male 353.9
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 351.3
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 351.0
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 350.7
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 350.7
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 348.8
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 347.6
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 342.7
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 342.7
GTEX-14XAO-0226-SM-68728 60-69 years, female 340.7
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 340.7
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 340.0
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 340.0
GTEX-R53T-0326-SM-48FEC 50-59 years, female 339.6
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 337.4
GTEX-Q734-0326-SM-48U15 40-49 years, female 336.0
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 334.8
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 332.2
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 329.8
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 329.8
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 328.4
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 327.1
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 321.1
GTEX-17F96-1226-SM-79OK2 70-79 years, male 315.7
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 315.1
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 311.6
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 311.2
GTEX-1B932-1426-SM-793AN 40-49 years, female 310.8
GTEX-17HHE-0126-SM-79398 50-59 years, male 309.9
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 304.3
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 289.9
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 287.5
GTEX-11GSP-0626-SM-5986T 60-69 years, female 284.8
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 277.5
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 275.0
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 268.2
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 239.2
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

217.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 217.9
FF:10018-101C9 64,69,70 years, mixed 217.9

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