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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:2201.2 nTPM
HPA Brain:6932.9 nTPM
GTEx:2201.2 nTPM
FANTOM5:5004.3 Scaled Tags Per Million
Pig:3681.2 nTPM
Mouse:2838.6 nTPM
Allen mouse:19.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA004128
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6932.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 1884.2
2288 Male, age 75, left hemisphere 3812.6
2846 Female, age 79, unknown 2142.1
2290 Female, age 72, unknown 1819.1
2481 Female, age 94, left hemisphere 1796.3
1854 Male, age 80, left hemisphere 1728.3
1781 Male, age 74, unknown 1643.5
2289 Male, age 61, right hemisphere 1158.4
1857 Female, age 85, left hemisphere 973.2
Globus pallidus, externus
nTPM: 5507.7
1996 Male, age 80, right hemisphere 8171.1
2772 Female, age 79, unknown 5966.0
2646 Male, age 61, right hemisphere 4870.8
2395 Male, age 75, both hemispheres 4769.2
2567 Female, age 72, unknown 3761.1
Globus pallidus, internus
nTPM: 6932.9
2111 Female, age 85, right hemisphere 11364.4
2778 Female, age 91, both hemispheres 8480.1
2287 Male, age 75, right hemisphere 7247.7
2037 Male, age 80, right hemisphere 6543.1
1818 Male, age 74, unknown 6425.2
2566 Female, age 72, unknown 4893.6
2483 Female, age 94, right hemisphere 3575.8
Nucleus accumbens
nTPM: 2761.3
2391 Female, age 94, left hemisphere 5998.4
2286 Male, age 75, left hemisphere 3341.9
2698 Female, age 72, unknown 3275.2
2732 Male, age 80, right hemisphere 3091.6
1806 Female, age 85, left hemisphere 1968.0
1783 Male, age 74, unknown 1794.2
2824 Male, age 61, right hemisphere 1755.7
1856 Female, age 91, right hemisphere 865.3
Nucleus basalis of Meynert
nTPM: 3046.5
2569 Male, age 61, both hemispheres 4267.5
2821 Male, age 75, both hemispheres 3595.2
2393 Male, age 80, right hemisphere 2198.3
2484 Female, age 94, left hemisphere 2125.0
Nucleus of the diagonal band
nTPM: 841.5
1812 Female, age 91, both hemispheres 1884.0
1979 Male, age 74, unknown 793.4
2029 Male, age 61, right hemisphere 776.0
2195 Female, age 85, both hemispheres 378.2
2775 Male, age 80, right hemisphere 376.1
Putamen
nTPM: 2091.3
2482 Female, age 94, left hemisphere 2959.8
1829 Male, age 74, unknown 2899.2
2647 Male, age 75, left hemisphere 2411.2
1937 Female, age 91, right hemisphere 2034.4
2489 Female, age 72, unknown 1862.7
2466 Female, age 79, unknown 1744.2
1838 Male, age 80, right hemisphere 727.4
Septal nuclei
nTPM: 1533.4
2394 Male, age 61, left hemisphere 3843.8
2199 Male, age 80, right hemisphere 1870.4
2629 Female, age 94, right hemisphere 1514.1
2059 Female, age 85, both hemispheres 1278.5
2031 Female, age 72, unknown 910.4
2009 Female, age 91, both hemispheres 894.1
1960 Male, age 74, unknown 422.7
Stria terminalis, bed nucleus
nTPM: 1099.8
1974 Female, age 91, both hemispheres 1297.7
2201 Male, age 74, unknown 1235.4
2486 Female, age 94, both hemispheres 766.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2201.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1486.3
Samples: 246

Max nTPM: 5944.5
Min nTPM: 354.2
Std nTPM: 833.8
Median nTPM: 1257.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 5944.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 5197.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 4314.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 4208.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 3836.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 3765.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 3315.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 3195.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3157.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 3129.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 3114.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 3058.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 2958.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 2835.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 2763.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 2761.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 2752.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2722.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 2707.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2688.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 2688.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 2683.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2668.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 2622.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 2604.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2568.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 2558.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 2545.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 2541.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 2510.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2490.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 2429.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2415.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 2410.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 2354.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 2316.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2299.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 2271.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 2269.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 2247.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 2205.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2186.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 2159.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 2149.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2138.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 2127.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2115.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2102.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2099.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 2079.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 2078.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 2073.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 2061.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 2052.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 2044.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 2021.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 2019.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1994.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1974.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1960.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1954.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1947.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1939.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1910.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1884.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1873.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1860.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1856.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1830.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 1819.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1801.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1746.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1743.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1697.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1664.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1656.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1651.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1624.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1623.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1617.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1608.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1606.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1598.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1595.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1590.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1590.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1587.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1586.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1585.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1580.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1574.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1568.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1557.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1514.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1495.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1489.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1482.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1454.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1443.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1439.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1436.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 1429.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1419.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1418.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1409.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1402.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1399.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1382.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1379.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1372.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1370.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1368.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1362.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1344.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1339.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1333.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1318.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1310.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1308.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1266.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1263.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1260.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1259.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1254.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1253.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1253.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1251.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1249.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1248.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1247.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1225.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 1225.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1219.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1217.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1206.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1202.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1182.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1174.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1171.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1168.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1153.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1134.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1133.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1117.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1116.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1103.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1089.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1088.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1087.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1082.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1048.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1046.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1040.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1031.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1030.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1028.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1024.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1009.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1005.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1002.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1002.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1000.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 994.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 994.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 992.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 989.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 980.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 971.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 967.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 966.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 962.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 958.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 955.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 939.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 938.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 926.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 915.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 908.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 907.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 898.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 897.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 886.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 881.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 879.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 878.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 871.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 861.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 861.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 851.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 847.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 847.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 846.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 840.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 839.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 832.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 829.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 829.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 828.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 827.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 823.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 821.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 810.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 809.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 802.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 798.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 798.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 798.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 785.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 783.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 771.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 770.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 768.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 753.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 749.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 740.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 739.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 709.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 707.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 706.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 686.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 685.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 680.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 673.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 655.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 651.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 636.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 631.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 618.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 616.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 605.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 578.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 577.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 577.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 571.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 567.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 556.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 553.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 549.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 548.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 529.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 484.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 480.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 417.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 394.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 383.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 354.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 990.1
Samples: 246

Max nTPM: 12176.5
Min nTPM: 54.9
Std nTPM: 1144.7
Median nTPM: 671.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 12176.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 5973.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 5756.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 5641.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 5265.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 3820.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 3660.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 3466.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 3304.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 3296.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 3199.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 2509.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 2480.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 2417.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 2258.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 2158.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 2085.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 2032.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 2011.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1981.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 1979.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1919.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 1902.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1896.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 1884.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 1852.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1773.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1760.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 1734.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1693.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1688.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1641.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1590.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1562.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1554.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1522.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1501.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1497.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 1489.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1488.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1462.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1454.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1452.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1419.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1410.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 1409.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1391.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 1387.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1381.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1376.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1361.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 1358.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1301.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1300.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1288.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1284.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 1279.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 1269.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1261.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1253.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1247.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1219.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 1218.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 1185.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1141.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1138.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1121.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1120.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1101.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1093.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1049.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 1047.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1037.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 1036.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1032.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1017.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1005.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 996.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 984.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 964.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 963.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 957.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 956.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 917.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 912.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 911.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 902.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 898.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 886.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 881.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 877.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 873.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 863.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 850.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 845.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 841.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 837.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 831.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 826.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 824.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 809.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 802.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 782.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 780.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 777.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 775.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 772.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 761.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 746.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 738.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 734.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 730.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 725.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 719.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 719.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 713.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 701.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 692.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 688.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 685.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 681.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 680.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 679.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 663.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 660.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 651.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 651.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 650.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 643.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 640.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 632.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 631.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 623.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 616.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 611.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 604.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 602.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 600.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 598.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 591.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 578.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 573.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 572.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 566.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 563.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 562.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 560.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 559.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 557.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 557.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 555.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 553.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 551.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 539.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 528.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 526.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 521.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 520.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 519.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 512.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 511.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 508.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 506.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 499.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 494.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 485.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 477.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 475.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 475.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 469.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 467.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 463.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 458.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 448.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 443.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 442.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 438.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 432.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 430.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 427.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 424.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 411.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 407.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 405.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 405.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 402.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 402.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 401.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 399.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 398.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 397.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 390.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 385.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 380.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 377.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 376.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 372.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 371.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 368.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 363.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 360.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 360.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 357.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 354.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 351.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 348.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 339.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 328.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 315.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 315.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 313.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 312.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 311.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 308.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 305.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 302.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 300.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 293.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 285.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 283.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 274.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 273.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 271.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 265.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 253.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 252.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 244.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 231.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 231.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 228.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 228.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 224.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 220.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 213.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 213.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 203.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 202.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 202.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 182.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 181.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 178.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 168.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 165.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 135.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 113.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 54.9
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Brain - Putamen (basal ganglia)
Average nTPM: 2201.2
Samples: 205

Max nTPM: 8747.3
Min nTPM: 625.1
Std nTPM: 1055.3
Median nTPM: 2031.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 8747.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 7384.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 5940.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 4476.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 4341.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 4198.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 4021.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 3989.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 3912.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 3887.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 3872.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 3825.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 3812.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 3807.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 3711.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 3708.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 3518.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 3495.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 3479.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 3343.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 3336.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 3334.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 3272.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 3258.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 3256.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 3255.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 3174.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 3160.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 3149.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 3149.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 3139.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 3090.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 3079.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 3067.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 3063.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 3037.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 3035.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 3032.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 3001.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 2972.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 2967.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 2960.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 2925.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 2851.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 2833.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 2816.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 2794.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 2772.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 2739.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2738.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 2732.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 2703.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 2674.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 2656.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 2640.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 2622.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 2604.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 2602.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 2589.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 2584.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 2579.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 2541.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 2533.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 2509.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 2500.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 2498.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 2495.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2490.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 2487.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 2457.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 2451.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 2445.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 2409.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 2377.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 2359.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 2353.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 2334.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 2331.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 2302.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 2299.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 2289.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2286.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 2277.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 2262.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 2256.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 2248.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 2223.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 2209.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 2199.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 2179.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 2176.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 2169.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 2154.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 2138.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 2119.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 2095.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 2094.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 2087.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 2068.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 2060.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 2035.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 2032.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 2031.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 2021.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 2002.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1993.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1992.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1951.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1944.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1942.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1935.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1907.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1891.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1886.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1885.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 1875.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1861.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1839.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1836.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1835.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1812.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1806.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1789.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1772.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1760.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1757.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1757.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1755.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1736.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1726.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1708.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1706.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1706.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1703.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1700.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1689.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1684.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1674.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1663.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1656.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1644.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1637.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1630.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1614.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1614.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1587.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1567.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1566.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1563.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1561.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1555.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1529.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1527.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1520.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1518.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1514.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1511.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1506.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1498.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1487.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1485.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1476.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1440.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1437.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1381.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1363.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1350.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1314.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1289.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1264.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1260.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1255.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1235.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1232.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 1230.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1208.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1201.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1185.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1169.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1158.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1145.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1143.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1139.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1138.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1102.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1089.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1084.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1079.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1019.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 990.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 972.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 965.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 937.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 923.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 884.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 882.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 881.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 842.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 810.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 809.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 786.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 748.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 716.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 653.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 625.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5004.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1251.8
FF:10164-103B2 76 years, female 1251.8
Nucleus accumbens
Scaled Tags Per Million: 2468.7
FF:10037-101F1 23-56 years, mixed 2468.7
Putamen
Scaled Tags Per Million: 1027.2
FF:10176-103C5 60 years, female 1027.2
Globus pallidus
Scaled Tags Per Million: 5004.3
FF:10161-103A8 76 years, female 5840.8
FF:10175-103C4 60 years, female 4167.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3681.2
Pig sample Sample description nTPM
Caudate
nTPM: 804.5
Samples: 4

Max nTPM: 896.0
Min nTPM: 633.2
Sample A Female 892.2
Sample B Female 633.2
Sample C Male 796.5
Sample D Male 896.0
Putamen
nTPM: 3681.2
Samples: 4

Max nTPM: 6548.9
Min nTPM: 1577.8
Sample A Female 6548.9
Sample B Female 1577.8
Sample C Male 2442.9
Sample D Male 4155.3
Septum
nTPM: 1866.3
Samples: 4

Max nTPM: 2627.8
Min nTPM: 1205.7
Sample A Female 1763.4
Sample B Female 1205.7
Sample C Male 1868.2
Sample D Male 2627.8
Ventral pallidum
nTPM: 2993.3
Samples: 4

Max nTPM: 4944.3
Min nTPM: 898.5
Sample A Female 898.5
Sample B Female 2363.8
Sample C Male 3766.4
Sample D Male 4944.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2838.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2838.6
Samples: 4

Max nTPM: 3313.1
Min nTPM: 2562.8
Sample A Male 2668.0
Sample B Male 2562.8
Sample C Female 3313.1
Sample D Female 2810.4
Septum
nTPM: 2620.3
Samples: 4

Max nTPM: 4102.0
Min nTPM: 1412.1
Sample A Male 1412.1
Sample B Male 1973.9
Sample C Female 2993.2
Sample D Female 4102.0
Ventral forebrain
nTPM: 1429.5
Samples: 4

Max nTPM: 1685.9
Min nTPM: 1185.6
Sample A Male 1397.9
Sample B Male 1185.6
Sample C Female 1448.4
Sample D Female 1685.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.5
75457514 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 19.3
75496147 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 19.1
75496510 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 18.5
75457515 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 18.4
75496148 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 17.7
75496529 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 17.4
69117382 Antisense, RP_050330_01_A05, Mouse strain C57BL/6J (56 days, male) 17.1
75457513 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 16.5
75496500 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 16.5
75457512 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 16.4
75492714 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 16.2
75496145 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 16.0
75496146 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 15.9
75492725 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 15.8
75496499 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 15.6
75492744 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 15.0
79556704 Antisense, RP_071204_01_D07, Mouse strain C57BL/6J (56 days, male) 15.0
75492715 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 14.9
2490 Antisense, RP_Baylor_102969, Mouse strain C57BL/6J (56 days, male) 12.6
Pallidum
Expression energy: 19.6
75457515 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 21.6
75496147 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 21.2
79556704 Antisense, RP_071204_01_D07, Mouse strain C57BL/6J (56 days, male) 21.2
75496148 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 20.4
75496510 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 20.2
75457514 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 20.1
75496529 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 20.0
69117382 Antisense, RP_050330_01_A05, Mouse strain C57BL/6J (56 days, male) 19.8
75457512 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 19.8
75496500 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 19.1
75492714 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 18.7
75496145 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 18.7
75496146 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 18.4
75496499 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 18.4
75457513 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 17.9
75492715 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 17.6
75492725 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 17.3
75492744 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 17.1
2490 Antisense, RP_Baylor_102969, Mouse strain C57BL/6J (56 days, male) 14.9

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