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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1738.9 nTPM
HPA Brain:4093.0 nTPM
GTEx:1738.9 nTPM
Pig:2229.2 nTPM
Mouse:2143.8 nTPM
Allen mouse:18.8 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4093.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 455.8
2226 Male, age 75, left hemisphere 681.5
1961 Female, age 42, unknown 230.1
Dorsomedial nucleus
nTPM: 1310.5
2017 Female, age 42, unknown 2272.9
1989 Male, age 62, unknown 1310.1
2041 Female, age 72, unknown 348.5
Lateral hypothalamic area
nTPM: 2255.5
2271 Male, age 75, both hemispheres 3287.0
2228 Male, age 66, unknown 2679.2
1791 Male, age 80, right hemisphere 1799.0
2412 Male, age 62, unknown 1256.8
Mammillary body
nTPM: 4093.0
1948 Female, age 72, unknown 4659.9
1945 Male, age 80, right hemisphere 4656.3
1834 Female, age 42, unknown 4368.3
1923 Female, age 72, unknown 3877.8
2413 Male, age 66, unknown 2902.8
Paraventricular nucleus
nTPM: 2876.8
2700 Male, age 62, unknown 2876.8
Preoptic area
nTPM: 2195.8
2414 Female, age 72, unknown 3932.3
1861 Female, age 42, unknown 2125.1
1907 Male, age 80, right hemisphere 529.9
Supraoptic nucleus
nTPM: 2809.5
2043 Male, age 62, unknown 3790.9
1894 Female, age 72, unknown 3035.5
2835 Female, age 72, unknown 1602.0
Ventromedial nucleus
nTPM: 305.6
1982 Female, age 72, unknown 341.9
1822 Female, age 42, unknown 269.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1738.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1738.9
Samples: 202

Max nTPM: 11293.4
Min nTPM: 84.5
Std nTPM: 1744.4
Median nTPM: 1098.4
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 11293.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 8658.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 7865.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 7235.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 6193.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 6074.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 5895.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 5786.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 5528.9
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 5513.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 5420.9
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 5028.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 4989.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 4715.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 4650.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 4573.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 4551.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 4533.1
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 4475.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 4204.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 4106.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 4055.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 4005.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 3955.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 3889.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 3788.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 3666.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 3512.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 3488.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 3479.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 3420.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 3335.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 3226.9
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 2979.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 2963.8
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 2963.3
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 2921.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 2918.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 2830.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 2805.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 2685.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 2619.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 2613.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 2603.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 2578.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 2535.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 2461.5
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 2431.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 2419.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 2403.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2359.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 2343.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 2240.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 2231.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 2212.5
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 2160.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 2122.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 2026.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1944.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1937.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1928.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1904.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1878.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 1867.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1841.2
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 1819.5
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 1800.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 1792.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1780.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1739.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1719.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 1635.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1600.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1584.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1575.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1566.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1565.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1563.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1554.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1554.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 1469.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 1427.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1410.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1399.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 1373.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1345.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1321.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 1311.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 1288.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 1276.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 1276.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 1241.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 1236.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1215.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 1184.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 1176.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1176.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 1164.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1132.1
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 1105.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 1104.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1092.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 1091.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 1079.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 1071.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 1062.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1046.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1025.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 1016.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 990.1
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 987.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 940.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 927.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 919.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 896.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 881.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 861.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 858.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 821.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 800.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 795.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 793.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 756.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 740.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 728.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 724.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 723.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 717.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 709.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 709.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 706.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 695.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 692.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 677.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 675.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 663.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 653.4
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 642.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 635.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 633.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 632.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 623.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 613.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 609.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 591.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 579.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 574.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 569.9
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 568.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 562.3
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 562.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 556.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 540.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 536.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 528.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 525.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 523.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 521.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 518.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 510.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 504.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 503.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 493.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 489.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 488.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 484.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 482.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 471.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 440.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 440.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 435.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 428.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 417.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 417.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 410.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 403.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 394.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 380.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 361.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 358.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 343.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 342.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 339.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 334.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 308.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 303.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 292.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 290.6
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 285.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 279.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 265.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 258.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 254.4
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 248.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 243.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 215.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 193.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 150.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 140.3
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 126.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 112.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 84.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2229.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 2229.2
Samples: 4

Max nTPM: 3000.7
Min nTPM: 953.9
Sample A Female 2515.3
Sample B Female 3000.7
Sample C Male 2447.0
Sample D Male 953.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2143.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 2143.8
Samples: 4

Max nTPM: 2683.5
Min nTPM: 1505.8
Sample A Male 1505.8
Sample B Male 1768.0
Sample C Female 2683.5
Sample D Female 2618.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.8
75457515 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 20.8
75496147 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 20.2
75457512 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 20.0
75496148 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 19.7
69117382 Antisense, RP_050330_01_A05, Mouse strain C57BL/6J (56 days, male) 19.5
75457514 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 19.5
75496510 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 19.5
75492715 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 19.2
75496499 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 19.2
75492714 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 18.9
79556704 Antisense, RP_071204_01_D07, Mouse strain C57BL/6J (56 days, male) 18.9
75496529 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 18.8
75457513 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 18.3
75492744 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 18.0
75496146 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 18.0
75496145 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 17.9
75496500 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 16.8
75492725 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 16.0
2490 Antisense, RP_Baylor_102969, Mouse strain C57BL/6J (56 days, male) 12.7

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