We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPS10
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPS10
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:729.8 nTPM
FANTOM5:233.1 Scaled Tags Per Million
Pig:323.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047268Antibody HPA048084
Glial cells MediumNot detected
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

729.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 729.8
Samples: 246

Max nTPM: 1997.0
Min nTPM: 337.5
Std nTPM: 248.4
Median nTPM: 677.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1997.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1986.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1827.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1478.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1466.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1438.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1391.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1317.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1285.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1285.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1247.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1243.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1233.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1130.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1121.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1086.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1069.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1067.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1063.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1025.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1023.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1023.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1016.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1016.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1002.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1000.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 969.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 961.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 957.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 956.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 949.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 941.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 940.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 939.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 935.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 926.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 914.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 913.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 912.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 911.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 909.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 905.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 904.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 899.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 896.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 893.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 892.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 891.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 886.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 885.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 881.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 877.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 876.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 864.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 855.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 853.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 849.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 841.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 840.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 839.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 838.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 833.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 832.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 831.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 827.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 827.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 825.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 822.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 819.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 819.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 815.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 813.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 812.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 799.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 796.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 795.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 793.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 785.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 780.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 774.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 773.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 771.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 770.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 770.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 768.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 760.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 759.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 758.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 745.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 744.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 743.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 739.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 734.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 733.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 732.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 731.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 726.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 724.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 722.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 722.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 720.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 720.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 717.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 711.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 709.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 708.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 708.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 701.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 700.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 699.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 699.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 696.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 696.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 694.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 693.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 693.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 692.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 691.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 684.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 680.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 680.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 679.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 677.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 677.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 677.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 676.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 675.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 673.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 673.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 669.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 669.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 668.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 667.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 666.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 666.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 665.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 663.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 662.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 662.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 661.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 657.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 657.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 657.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 653.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 650.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 647.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 646.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 641.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 640.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 633.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 631.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 630.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 630.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 628.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 627.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 625.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 625.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 624.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 620.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 620.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 618.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 618.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 618.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 613.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 611.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 608.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 607.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 603.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 601.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 598.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 598.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 598.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 596.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 593.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 592.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 592.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 588.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 584.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 583.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 583.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 583.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 577.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 573.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 568.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 567.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 564.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 561.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 558.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 558.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 556.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 548.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 546.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 543.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 536.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 535.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 534.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 529.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 529.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 528.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 528.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 527.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 526.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 526.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 517.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 517.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 513.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 513.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 511.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 511.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 507.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 505.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 504.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 504.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 503.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 503.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 499.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 494.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 494.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 489.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 486.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 482.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 480.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 470.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 470.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 470.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 468.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 465.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 464.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 460.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 454.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 452.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 450.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 445.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 443.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 441.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 436.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 436.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 433.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 433.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 431.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 427.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 426.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 421.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 367.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 367.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 337.5
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

233.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 233.1
FF:10164-103B2 76 years, female 233.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

323.3
Pig sample Sample description nTPM
Caudate
nTPM: 323.3
Samples: 4

Max nTPM: 356.9
Min nTPM: 270.0
Sample A Female 310.7
Sample B Female 356.9
Sample C Male 355.4
Sample D Male 270.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org