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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
Not detected
Cells in tubules:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1083.5
nTPM
HPA:
563.6
nTPM
GTEx:
1083.5
nTPM
FANTOM5:
511.3
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA047268
Antibody HPA048084
Cells in glomeruli
Not detected
Not detected
Cells in tubules
Medium
Not detected
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
563.6
Female, age 58
Kidney sample 55 nTPM: 671.1
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 633
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 527.9
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 737.4
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 403.4
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 388.6
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 952.6
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 360.7
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 397.7
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1083.5
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 1083.5
Samples: 85
Max nTPM: 2016.3
Min nTPM: 644.9
Std nTPM: 291.9
Median nTPM: 1000.1
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
2016.3
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
1884.6
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
1803.8
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
1674.4
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
1657.5
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
1598.5
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
1563.5
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
1548.6
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
1521.8
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
1502.4
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
1496.0
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
1484.9
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
1394.6
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
1393.3
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
1389.6
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
1353.7
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
1348.8
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
1331.7
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
1323.2
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
1267.4
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
1259.3
GTEX-O5YV-1226-SM-EV795
60-69 years, female
1256.1
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
1226.7
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
1151.0
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
1147.5
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
1142.6
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
1132.9
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
1124.8
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
1121.0
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
1115.4
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
1102.4
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
1091.8
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
1085.5
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
1077.2
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
1058.6
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
1050.9
GTEX-13112-2126-SM-5GCO4
50-59 years, male
1048.3
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
1047.1
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
1044.0
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
1041.9
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
1019.1
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
1004.3
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
1000.1
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
999.2
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
998.8
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
998.7
GTEX-14C39-2126-SM-664OH
40-49 years, male
991.9
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
989.2
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
972.3
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
969.2
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
966.1
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
963.6
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
948.7
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
946.6
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
930.7
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
928.8
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
899.0
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
894.9
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
892.7
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
891.5
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
888.5
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
887.3
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
883.5
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
866.3
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
865.3
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
846.9
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
845.6
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
844.3
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
839.1
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
834.3
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
831.6
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
831.3
GTEX-12696-0926-SM-5FQTV
60-69 years, male
809.8
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
801.4
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
792.7
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
782.9
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
780.5
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
752.4
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
745.6
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
740.0
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
737.5
GTEX-RN64-1626-SM-48FD7
50-59 years, male
725.7
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
719.4
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
718.9
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
644.9
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Kidney - Medulla Average nTPM: 1040.3
Samples: 4
Max nTPM: 1440.3
Min nTPM: 781.0
Std nTPM: 257.7
Median nTPM: 969.9
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
1440.3
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
1089.4
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
850.4
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
781.0
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
