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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
330.9
nTPM
FANTOM5:
304.5
Scaled Tags Per Million
Pig:
686.3
nTPM
Allen mouse:
10.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
330.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 266.1
2188
Female, age 91, both hemispheres
277.9
2301
Female, age 85, both hemispheres
265.7
1984
Male, age 76, both hemispheres
262.0
2090
Male, age 80, both hemispheres
258.8
Dorsal cochlear nucleus nTPM: 256.8
2187
Female, age 91, both hemispheres
290.0
2058
Male, age 76, both hemispheres
261.9
2370
Male, age 61, both hemispheres
260.4
2802
Male, age 74, right hemisphere
260.1
2378
Male, age 80, both hemispheres
211.8
Dorsal tegmental nucleus nTPM: 291.3
2083
Male, age 80, both hemispheres
323.6
2358
Male, age 61, both hemispheres
305.5
1936
Male, age 76, left hemisphere
268.5
2326
Male, age 74, both hemispheres
267.5
Dorsolateral tegmental area nTPM: 282.9
2654
Male, age 80, both hemispheres
304.7
2751
Female, age 85, both hemispheres
285.9
2141
Male, age 76, both hemispheres
279.7
2337
Male, age 61, both hemispheres
274.1
2360
Male, age 74, both hemispheres
270.0
Kolliker-Fuse nucleus nTPM: 296.2
2163
Male, age 80, both hemispheres
345.5
2793
Female, age 91, left hemisphere
298.5
2315
Male, age 76, right hemisphere
244.5
Lateral lemniscal nuclei nTPM: 295.6
2169
Male, age 76, both hemispheres
395.0
2036
Male, age 80, both hemispheres
319.0
2746
Female, age 85, left hemisphere
310.0
2453
Male, age 74, right hemisphere
235.9
2320
Female, age 91, left hemisphere
218.1
Lateral parabrachial nucleus nTPM: 281.0
2139
Female, age 85, right hemisphere
352.7
2013
Male, age 80, both hemispheres
292.8
2790
Male, age 61, both hemispheres
240.7
2792
Male, age 76, both hemispheres
237.8
Lateral vestibular nucleus nTPM: 314.2
2184
Male, age 76, both hemispheres
339.6
2311
Male, age 80, both hemispheres
288.9
Locus coeruleus nTPM: 313.5
2123
Female, age 91, both hemispheres
409.0
2720
Male, age 74, both hemispheres
329.4
2014
Male, age 55, unknown
325.7
2162
Male, age 80, both hemispheres
300.6
1980
Male, age 76, both hemispheres
286.4
2788
Male, age 74, unknown
284.6
2317
Female, age 72, unknown
258.9
Medial parabrachial nucleus nTPM: 300.1
2854
Male, age 80, both hemispheres
357.5
2170
Female, age 91, both hemispheres
356.6
2786
Male, age 76, both hemispheres
271.1
2156
Male, age 61, both hemispheres
269.0
2463
Female, age 85, right hemisphere
246.6
Medial periolivary nuclei nTPM: 293.0
2171
Female, age 85, both hemispheres
395.6
2063
Male, age 76, both hemispheres
361.2
2791
Male, age 74, right hemisphere
278.6
2081
Male, age 80, both hemispheres
221.9
2458
Female, age 91, both hemispheres
207.6
Motor facial nucleus nTPM: 288.9
2062
Male, age 76, both hemispheres
383.5
2697
Female, age 85, both hemispheres
323.3
2365
Male, age 74, right hemisphere
307.9
2126
Male, age 61, both hemispheres
252.8
2327
Male, age 80, both hemispheres
239.1
2795
Female, age 91, both hemispheres
226.8
Motor trigeminal nucleus nTPM: 261.1
2335
Male, age 61, both hemispheres
285.7
2079
Male, age 80, both hemispheres
280.5
2560
Male, age 74, both hemispheres
271.4
2309
Male, age 76, both hemispheres
257.6
2321
Female, age 91, both hemispheres
210.1
Nuclei of the trapezoid body nTPM: 324.1
1983
Male, age 76, both hemispheres
407.5
2159
Male, age 61, both hemispheres
376.8
2735
Female, age 85, both hemispheres
358.0
2166
Male, age 80, both hemispheres
292.8
2368
Female, age 91, both hemispheres
185.5
Nucleus raphe magnus nTPM: 330.0
2172
Female, age 85, both hemispheres
408.1
2160
Male, age 61, both hemispheres
407.9
2455
Male, age 74, both hemispheres
338.3
2051
Male, age 76, both hemispheres
325.5
2328
Male, age 80, both hemispheres
282.3
2459
Female, age 91, both hemispheres
218.0
Paramedian reticular nucleus nTPM: 315.0
2050
Female, age 85, both hemispheres
408.1
2313
Male, age 61, both hemispheres
306.8
2057
Male, age 80, both hemispheres
286.6
2052
Male, age 76, both hemispheres
258.7
Pedunculopontine tegmental nucleus nTPM: 298.9
2334
Male, age 80, both hemispheres
301.5
2338
Male, age 61, both hemispheres
298.4
1921
Female, age 85, both hemispheres
296.8
Pontine nuclei nTPM: 330.9
2787
Female, age 85, both hemispheres
472.7
1863
Male, age 55, unknown
450.9
1968
Male, age 76, left hemisphere
361.4
2727
Male, age 61, right hemisphere
309.7
2109
Female, age 72, unknown
307.5
2454
Male, age 74, left hemisphere
267.5
2115
Male, age 80, left hemisphere
241.6
2319
Female, age 91, both hemispheres
236.2
Pontine raphe nucleus nTPM: 302.5
2122
Female, age 85, midline
345.9
2853
Male, age 76, midline
259.2
Posteroventral cochlear nucleus nTPM: 265.1
2752
Female, age 85, both hemispheres
327.4
2371
Male, age 61, both hemispheres
264.5
2070
Male, age 76, both hemispheres
262.4
2341
Male, age 80, both hemispheres
261.8
2135
Female, age 91, both hemispheres
209.4
Principal sensory trigeminal nucleus nTPM: 313.7
2158
Male, age 61, both hemispheres
365.3
2324
Male, age 76, both hemispheres
325.4
2008
Male, age 80, left hemisphere
324.7
2367
Female, age 91, left hemisphere
239.6
Reticular pontine nucleus, caudal nTPM: 259.8
2092
Male, age 76, both hemispheres
323.6
2332
Male, age 80, right hemisphere
261.5
2559
Male, age 74, both hemispheres
259.1
2457
Female, age 91, both hemispheres
194.9
Reticular pontine nucleus, oral nTPM: 303.1
2167
Male, age 76, both hemispheres
325.9
2012
Female, age 85, both hemispheres
325.1
1939
Male, age 80, both hemispheres
315.1
2361
Male, age 74, both hemispheres
298.3
2366
Female, age 91, both hemispheres
251.0
Reticulotegmental nucleus nTPM: 263.4
2325
Male, age 76, both hemispheres
299.1
2452
Male, age 74, both hemispheres
253.1
2333
Male, age 80, both hemispheres
252.6
2322
Female, age 91, both hemispheres
249.0
Spinal trigeminal nucleus, oral nTPM: 285.9
2164
Male, age 80, both hemispheres
290.0
2737
Female, age 85, both hemispheres
288.2
1978
Male, age 76, both hemispheres
279.5
Subcoeruleus area nTPM: 288.2
1958
Male, age 80, both hemispheres
333.6
2323
Female, age 91, left hemisphere
325.5
2089
Male, age 76, left hemisphere
271.3
2369
Female, age 85, left hemisphere
267.5
2451
Male, age 74, both hemispheres
243.1
Superior olive nTPM: 290.2
1875
Female, age 85, both hemispheres
367.2
2020
Male, age 76, both hemispheres
310.5
2364
Male, age 74, right hemisphere
275.3
2329
Male, age 80, right hemisphere
265.1
2561
Female, age 91, both hemispheres
232.9
Ventral periolivary nuclei nTPM: 302.6
2165
Male, age 80, both hemispheres
342.0
2130
Female, age 85, both hemispheres
339.9
2023
Male, age 76, both hemispheres
290.6
2794
Female, age 91, left hemisphere
238.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 288.2
2840
Female, age 85, both hemispheres
355.3
1959
Male, age 76, both hemispheres
336.8
2449
Male, age 74, both hemispheres
305.0
2359
Male, age 61, both hemispheres
280.0
2161
Male, age 80, both hemispheres
266.3
2456
Female, age 91, both hemispheres
185.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
686.3
Pig sample
Sample description
nTPM
Pons nTPM: 686.3
Samples: 4
Max nTPM: 870.3
Min nTPM: 496.2
Sample A
Female
697.9
Sample B
Female
496.2
Sample C
Male
680.9
Sample D
Male
870.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
