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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:138.9 nTPM
HPA Brain:53.7 nTPM
GTEx:138.9 nTPM
FANTOM5:174.8 Scaled Tags Per Million
Pig:100.2 nTPM
Mouse:46.6 nTPM
Allen mouse:0.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020429
Glial cells Low
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 53.7
2290 Female, age 72, unknown 67.4
2846 Female, age 79, unknown 66.7
1857 Female, age 85, left hemisphere 64.4
1854 Male, age 80, left hemisphere 51.0
2288 Male, age 75, left hemisphere 47.9
2289 Male, age 61, right hemisphere 47.8
2481 Female, age 94, left hemisphere 45.0
1781 Male, age 74, unknown 39.1
Globus pallidus, externus
nTPM: 46.3
1996 Male, age 80, right hemisphere 50.4
2646 Male, age 61, right hemisphere 50.0
2395 Male, age 75, both hemispheres 45.8
2772 Female, age 79, unknown 45.0
2567 Female, age 72, unknown 40.0
Globus pallidus, internus
nTPM: 50.1
2287 Male, age 75, right hemisphere 52.9
2778 Female, age 91, both hemispheres 52.8
2483 Female, age 94, right hemisphere 51.3
1818 Male, age 74, unknown 50.9
2566 Female, age 72, unknown 50.9
2037 Male, age 80, right hemisphere 48.4
2111 Female, age 85, right hemisphere 43.4
Nucleus accumbens
nTPM: 52.9
2698 Female, age 72, unknown 80.8
2391 Female, age 94, left hemisphere 57.5
2286 Male, age 75, left hemisphere 50.6
1806 Female, age 85, left hemisphere 49.9
2824 Male, age 61, right hemisphere 48.8
1856 Female, age 91, right hemisphere 46.4
1783 Male, age 74, unknown 45.8
2732 Male, age 80, right hemisphere 43.6
Nucleus basalis of Meynert
nTPM: 51.8
2393 Male, age 80, right hemisphere 57.7
2821 Male, age 75, both hemispheres 55.3
2484 Female, age 94, left hemisphere 49.9
2569 Male, age 61, both hemispheres 44.3
Nucleus of the diagonal band
nTPM: 43.1
2195 Female, age 85, both hemispheres 45.7
1979 Male, age 74, unknown 44.9
1812 Female, age 91, both hemispheres 44.1
2775 Male, age 80, right hemisphere 41.3
2029 Male, age 61, right hemisphere 39.6
Putamen
nTPM: 51.9
1829 Male, age 74, unknown 68.6
2482 Female, age 94, left hemisphere 53.3
2489 Female, age 72, unknown 49.9
1838 Male, age 80, right hemisphere 49.1
1937 Female, age 91, right hemisphere 48.3
2466 Female, age 79, unknown 48.3
2647 Male, age 75, left hemisphere 45.6
Septal nuclei
nTPM: 41.9
2199 Male, age 80, right hemisphere 51.2
2629 Female, age 94, right hemisphere 44.1
2059 Female, age 85, both hemispheres 43.9
2031 Female, age 72, unknown 40.7
2394 Male, age 61, left hemisphere 39.7
1960 Male, age 74, unknown 38.3
2009 Female, age 91, both hemispheres 35.0
Stria terminalis, bed nucleus
nTPM: 42.6
2486 Female, age 94, both hemispheres 44.0
2201 Male, age 74, unknown 43.1
1974 Female, age 91, both hemispheres 40.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 135.9
Samples: 246

Max nTPM: 347.6
Min nTPM: 36.5
Std nTPM: 43.4
Median nTPM: 129.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 347.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 298.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 275.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 260.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 255.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 227.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 225.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 222.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 218.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 215.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 214.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 210.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 210.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 209.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 209.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 209.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 206.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 204.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 203.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 203.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 203.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 202.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 198.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 197.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 196.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 196.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 195.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 194.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 189.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 189.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 188.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 186.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 185.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 184.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 182.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 181.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 180.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 179.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 177.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 177.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 176.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 174.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 173.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 171.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 171.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 166.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 165.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 165.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 163.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 163.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 163.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 163.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 162.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 161.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 161.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 160.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 160.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 159.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 157.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 155.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 154.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 154.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 153.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 153.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 153.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 153.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 153.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 152.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 151.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 150.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 150.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 149.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 149.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 149.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 148.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 148.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 147.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 147.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 147.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 146.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 146.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 145.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 145.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 145.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 144.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 143.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 143.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 142.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 141.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 141.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 141.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 140.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 140.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 140.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 140.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 139.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 139.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 139.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 139.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 138.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 137.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 137.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 137.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 136.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 136.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 136.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 135.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 135.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 134.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 134.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 134.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 134.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 133.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 133.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 133.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 133.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 133.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 133.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 132.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 132.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 129.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 129.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 129.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 129.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 128.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 128.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 127.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 126.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 126.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 126.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 126.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 126.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 126.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 125.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 125.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 124.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 124.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 124.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 124.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 124.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 123.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 123.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 122.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 122.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 121.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 121.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 121.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 121.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 120.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 119.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 119.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 119.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 118.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 118.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 118.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 117.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 116.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 116.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 116.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 115.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 115.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 115.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 115.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 114.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 114.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 113.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 113.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 112.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 112.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 111.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 111.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 111.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 110.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 110.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 110.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 109.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 109.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 109.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 108.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 108.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 108.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 108.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 107.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 107.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 106.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 106.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 106.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 106.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 104.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 104.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 103.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 103.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 102.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 102.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 101.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 101.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 101.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 100.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 100.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 99.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 99.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 99.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 98.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 98.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 98.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 97.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 97.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 96.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 96.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 94.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 94.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 92.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 91.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 91.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 90.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 88.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 87.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 87.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 86.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 85.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 82.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 82.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 82.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 81.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 81.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 80.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 80.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 78.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 78.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 77.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 77.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 77.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 74.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 74.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 72.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 72.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 58.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 58.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 54.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 53.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 36.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 132.0
Samples: 246

Max nTPM: 289.9
Min nTPM: 34.5
Std nTPM: 37.5
Median nTPM: 130.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 289.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 249.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 242.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 233.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 231.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 224.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 214.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 212.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 209.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 206.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 205.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 203.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 201.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 198.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 195.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 193.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 193.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 191.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 191.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 188.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 185.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 180.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 179.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 178.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 176.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 174.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 174.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 173.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 173.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 172.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 169.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 169.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 169.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 168.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 168.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 167.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 166.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 165.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 165.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 164.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 163.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 161.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 161.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 160.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 160.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 159.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 159.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 157.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 156.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 156.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 156.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 156.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 156.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 155.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 155.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 154.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 154.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 154.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 154.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 153.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 151.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 151.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 151.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 150.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 150.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 149.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 149.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 149.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 149.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 149.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 148.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 148.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 148.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 148.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 148.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 148.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 148.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 147.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 147.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 146.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 144.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 144.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 144.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 143.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 143.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 142.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 142.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 142.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 141.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 141.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 141.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 141.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 140.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 139.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 139.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 139.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 138.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 138.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 138.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 137.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 137.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 137.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 136.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 136.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 136.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 136.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 135.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 135.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 135.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 135.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 134.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 134.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 133.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 133.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 133.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 133.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 133.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 133.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 132.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 132.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 131.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 131.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 130.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 130.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 130.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 130.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 130.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 128.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 128.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 128.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 126.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 126.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 126.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 126.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 125.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 125.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 124.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 122.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 122.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 122.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 121.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 121.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 121.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 120.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 120.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 120.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 120.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 120.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 120.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 120.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 119.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 119.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 118.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 117.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 117.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 116.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 116.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 116.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 116.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 116.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 115.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 115.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 115.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 115.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 115.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 115.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 114.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 114.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 113.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 113.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 113.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 112.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 111.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 111.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 111.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 110.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 109.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 109.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 109.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 108.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 107.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 107.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 107.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 107.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 107.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 106.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 106.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 106.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 106.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 105.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 104.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 104.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 104.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 103.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 103.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 103.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 103.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 103.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 102.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 101.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 101.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 100.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 100.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 100.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 100.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 99.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 98.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 97.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 97.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 97.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 95.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 94.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 92.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 92.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 90.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 89.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 89.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 88.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 88.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 87.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 87.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 87.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 87.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 86.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 86.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 86.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 84.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 84.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 83.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 83.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 83.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 79.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 79.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 77.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 74.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 73.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 71.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 68.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 66.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 64.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 63.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 60.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 58.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 53.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 52.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 34.5
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Brain - Putamen (basal ganglia)
Average nTPM: 138.9
Samples: 205

Max nTPM: 250.3
Min nTPM: 40.5
Std nTPM: 40.6
Median nTPM: 135.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 250.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 241.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 239.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 228.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 227.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 222.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 222.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 221.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 221.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 216.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 215.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 212.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 206.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 205.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 203.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 201.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 199.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 198.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 198.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 197.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 193.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 193.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 192.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 192.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 189.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 188.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 188.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 188.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 187.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 186.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 185.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 185.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 185.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 184.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 182.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 181.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 181.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 179.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 179.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 175.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 175.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 174.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 174.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 171.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 168.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 168.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 167.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 167.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 167.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 166.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 164.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 164.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 163.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 161.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 160.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 160.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 159.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 159.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 158.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 158.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 158.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 157.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 156.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 156.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 155.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 155.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 154.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 154.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 153.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 153.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 152.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 152.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 151.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 151.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 150.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 149.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 149.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 148.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 148.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 148.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 147.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 147.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 145.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 144.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 142.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 141.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 141.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 140.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 140.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 139.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 139.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 139.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 138.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 138.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 138.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 137.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 137.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 137.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 137.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 136.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 135.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 135.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 135.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 135.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 134.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 134.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 133.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 133.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 132.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 131.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 131.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 129.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 128.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 128.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 126.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 126.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 126.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 126.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 125.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 125.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 124.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 124.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 123.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 123.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 123.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 123.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 123.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 122.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 121.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 121.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 121.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 120.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 120.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 119.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 119.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 118.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 118.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 117.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 117.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 117.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 116.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 115.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 115.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 115.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 114.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 114.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 113.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 113.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 113.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 112.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 112.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 110.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 110.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 110.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 110.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 110.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 109.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 108.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 108.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 108.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 107.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 107.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 107.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 106.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 105.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 105.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 104.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 103.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 102.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 101.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 100.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 100.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 99.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 99.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 96.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 96.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 94.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 91.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 91.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 91.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 91.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 91.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 90.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 90.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 90.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 89.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 89.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 87.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 85.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 82.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 81.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 80.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 79.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 79.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 78.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 78.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 76.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 72.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 71.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 71.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 67.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 62.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 61.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 56.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 40.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

174.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 135.9
FF:10164-103B2 76 years, female 135.9
Nucleus accumbens
Scaled Tags Per Million: 79.1
FF:10037-101F1 23-56 years, mixed 79.1
Putamen
Scaled Tags Per Million: 174.8
FF:10176-103C5 60 years, female 174.8
Globus pallidus
Scaled Tags Per Million: 135.3
FF:10175-103C4 60 years, female 164.0
FF:10161-103A8 76 years, female 106.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.2
Pig sample Sample description nTPM
Caudate
nTPM: 73.1
Samples: 4

Max nTPM: 78.6
Min nTPM: 68.2
Sample A Female 78.6
Sample B Female 68.2
Sample C Male 73.8
Sample D Male 71.6
Putamen
nTPM: 100.2
Samples: 4

Max nTPM: 153.0
Min nTPM: 79.4
Sample A Female 79.4
Sample B Female 84.5
Sample C Male 153.0
Sample D Male 83.9
Septum
nTPM: 78.5
Samples: 4

Max nTPM: 89.0
Min nTPM: 71.1
Sample A Female 89.0
Sample B Female 76.4
Sample C Male 71.1
Sample D Male 77.5
Ventral pallidum
nTPM: 69.1
Samples: 4

Max nTPM: 81.8
Min nTPM: 57.5
Sample A Female 81.8
Sample B Female 70.7
Sample C Male 57.5
Sample D Male 66.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 44.3
Samples: 4

Max nTPM: 49.0
Min nTPM: 41.1
Sample A Male 45.2
Sample B Male 49.0
Sample C Female 41.9
Sample D Female 41.1
Septum
nTPM: 46.6
Samples: 4

Max nTPM: 55.3
Min nTPM: 39.4
Sample A Male 39.4
Sample B Male 55.3
Sample C Female 50.5
Sample D Female 41.3
Ventral forebrain
nTPM: 41.0
Samples: 4

Max nTPM: 46.2
Min nTPM: 36.7
Sample A Male 40.2
Sample B Male 40.7
Sample C Female 46.2
Sample D Female 36.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.7
79544852 Antisense, RP_071101_01_A11, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 0.7
79544852 Antisense, RP_071101_01_A11, Mouse strain C57BL/6J (56 days, male) 0.7

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