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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:424.0 nTPM
HPA:424.0 nTPM
GTEx:214.8 nTPM
FANTOM5:223.2 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020429
Cholangiocytes Not detected
Hepatocytes Low


LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

424.0
N/A
Female, age 60
Liver sample 21
nTPM: 556.1
overview
Male, age 54
Liver sample 23
nTPM: 420.8
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 614.3
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 395.6
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 445.2
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 389.4
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 292.3
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 428.2
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 335.2
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 363
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

214.8
GTEx sample id Sample description nTPM
Liver
Average nTPM: 214.8
Samples: 226

Max nTPM: 443.8
Min nTPM: 49.7
Std nTPM: 70.8
Median nTPM: 204.9
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 443.8
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 428.1
GTEX-14JG1-1626-SM-664NH 40-49 years, male 394.5
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 378.8
GTEX-13113-1326-SM-5GCOI 60-69 years, female 376.7
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 370.9
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 369.7
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 351.4
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 349.0
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 348.4
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 341.7
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 341.4
GTEX-14E7W-1526-SM-6871X 70-79 years, male 340.5
GTEX-P78B-1326-SM-3P611 40-49 years, female 337.7
GTEX-12696-0826-SM-5EGGE 60-69 years, male 334.2
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 329.3
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 329.1
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 326.0
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 321.9
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 321.8
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 317.1
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 313.0
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 310.2
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 309.8
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 308.2
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 306.5
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 305.8
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 304.5
GTEX-14XAO-0226-SM-68728 60-69 years, female 297.3
GTEX-QESD-2026-SM-447BI 20-29 years, male 296.0
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 295.9
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 291.5
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 290.4
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 290.3
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 289.6
GTEX-18A7A-1526-SM-72D69 50-59 years, female 287.3
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 285.7
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 284.1
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 282.8
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 281.8
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 281.5
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 279.5
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 277.0
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 274.0
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 273.6
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 273.2
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 271.1
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 270.9
GTEX-14PHX-0526-SM-664NW 50-59 years, male 268.8
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 268.8
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 268.1
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 267.4
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 266.2
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 262.3
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 262.3
GTEX-13112-1426-SM-5EGH8 50-59 years, male 261.7
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 261.7
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 259.3
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 256.1
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 254.7
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 254.5
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 253.1
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 251.9
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 250.6
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 248.9
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 248.9
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 246.3
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 245.8
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 245.2
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 243.5
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 242.0
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 240.4
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 240.4
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 238.8
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 238.3
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 237.9
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 237.5
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 237.5
GTEX-18A66-2026-SM-7189C 60-69 years, male 236.4
GTEX-1399T-0826-SM-5IFES 60-69 years, male 236.0
GTEX-18465-1626-SM-7LG6N 50-59 years, male 235.8
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 233.9
GTEX-11ZUS-2526-SM-59872 30-39 years, male 233.2
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 232.9
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 232.3
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 232.1
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 230.9
GTEX-REY6-1226-SM-48FDR 60-69 years, male 230.7
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 230.2
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 228.6
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 228.4
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 228.0
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 227.7
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 227.1
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 225.2
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 224.6
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 223.5
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 222.8
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 220.7
GTEX-YECK-1926-SM-4W21H 60-69 years, male 217.7
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 216.0
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 215.0
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 214.1
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 213.7
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 213.5
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 211.4
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 210.9
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 210.4
GTEX-S32W-1926-SM-4AD63 50-59 years, female 209.2
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 207.4
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 207.2
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 206.8
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 205.4
GTEX-144GL-1426-SM-79OMA 50-59 years, male 204.4
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 203.4
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 203.2
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 202.3
GTEX-RU72-1426-SM-46MUF 50-59 years, female 202.0
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 201.7
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 201.4
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 201.3
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 201.1
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 200.7
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 198.3
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 198.1
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 197.7
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 197.5
GTEX-QEL4-1226-SM-447A4 50-59 years, male 197.3
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 196.8
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 196.5
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 194.1
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 193.9
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 193.9
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 193.4
GTEX-RN64-1826-SM-48FDV 50-59 years, male 193.2
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 192.2
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 191.9
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 191.6
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 191.0
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 190.3
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 189.6
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 188.2
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 188.2
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 187.9
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 187.9
GTEX-O5YV-0726-SM-EV798 60-69 years, female 187.2
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 185.3
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 184.5
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 183.3
GTEX-14PJO-1726-SM-68719 60-69 years, male 183.0
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 181.6
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 181.3
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 180.6
GTEX-Q734-0326-SM-48U15 40-49 years, female 179.5
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 176.0
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 175.0
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 174.5
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 174.5
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 173.6
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 172.8
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 172.4
GTEX-R53T-0326-SM-48FEC 50-59 years, female 171.3
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 170.2
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 169.8
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 168.8
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 167.2
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 166.8
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 164.7
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 164.1
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 164.1
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 164.0
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 162.3
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 160.3
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 159.5
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 159.5
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 158.9
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 158.7
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 158.6
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 155.3
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 153.1
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 152.8
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 152.6
GTEX-X261-1726-SM-4PQYT 50-59 years, male 150.2
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 148.5
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 147.5
GTEX-17HHE-0126-SM-79398 50-59 years, male 147.4
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 146.8
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 146.7
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 145.5
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 144.6
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 143.4
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 142.1
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 141.1
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 139.5
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 139.4
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 137.8
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 136.6
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 135.7
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 135.4
GTEX-17F96-1226-SM-79OK2 70-79 years, male 134.8
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 134.6
GTEX-S33H-1626-SM-4AD68 30-39 years, male 134.0
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 133.4
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 132.9
GTEX-11GSP-0626-SM-5986T 60-69 years, female 130.9
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 130.4
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 126.3
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 124.5
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 120.9
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 120.8
GTEX-1B932-1426-SM-793AN 40-49 years, female 114.3
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 113.2
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 112.3
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 111.8
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 108.7
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 107.9
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 107.6
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 105.6
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 97.5
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 95.7
GTEX-1B933-1226-SM-731DW 50-59 years, female 95.3
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 83.2
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 81.2
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 77.9
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 74.5
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 49.7
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

223.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 223.2
FF:10018-101C9 64,69,70 years, mixed 223.2

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