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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:135.9 nTPM
FANTOM5:135.9 Scaled Tags Per Million
Pig:73.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020429
Glial cells Low
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 135.9
Samples: 246

Max nTPM: 347.6
Min nTPM: 36.5
Std nTPM: 43.4
Median nTPM: 129.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 347.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 298.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 275.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 260.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 255.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 227.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 225.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 222.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 218.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 215.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 214.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 210.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 210.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 209.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 209.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 209.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 206.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 204.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 203.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 203.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 203.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 202.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 198.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 197.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 196.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 196.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 195.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 194.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 189.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 189.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 188.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 186.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 185.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 184.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 182.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 181.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 180.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 179.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 177.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 177.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 176.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 174.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 173.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 171.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 171.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 166.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 165.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 165.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 163.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 163.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 163.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 163.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 162.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 161.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 161.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 160.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 160.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 159.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 157.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 155.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 154.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 154.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 153.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 153.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 153.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 153.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 153.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 152.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 151.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 150.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 150.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 149.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 149.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 149.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 148.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 148.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 147.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 147.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 147.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 146.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 146.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 145.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 145.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 145.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 144.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 143.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 143.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 142.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 141.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 141.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 141.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 140.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 140.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 140.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 140.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 139.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 139.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 139.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 139.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 138.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 137.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 137.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 137.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 136.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 136.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 136.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 135.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 135.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 134.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 134.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 134.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 134.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 133.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 133.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 133.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 133.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 133.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 133.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 132.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 132.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 129.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 129.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 129.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 129.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 128.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 128.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 127.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 126.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 126.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 126.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 126.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 126.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 126.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 125.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 125.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 124.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 124.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 124.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 124.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 124.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 123.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 123.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 122.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 122.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 121.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 121.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 121.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 121.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 120.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 119.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 119.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 119.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 118.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 118.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 118.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 117.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 116.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 116.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 116.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 115.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 115.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 115.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 115.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 114.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 114.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 113.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 113.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 112.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 112.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 111.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 111.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 111.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 110.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 110.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 110.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 109.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 109.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 109.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 108.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 108.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 108.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 108.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 107.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 107.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 106.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 106.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 106.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 106.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 104.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 104.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 103.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 103.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 102.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 102.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 101.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 101.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 101.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 100.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 100.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 99.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 99.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 99.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 98.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 98.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 98.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 97.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 97.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 96.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 96.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 94.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 94.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 92.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 91.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 91.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 90.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 88.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 87.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 87.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 86.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 85.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 82.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 82.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 82.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 81.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 81.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 80.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 80.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 78.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 78.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 77.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 77.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 77.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 74.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 74.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 72.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 72.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 58.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 58.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 54.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 53.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 36.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

135.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 135.9
FF:10164-103B2 76 years, female 135.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.0
Pig sample Sample description nTPM
Caudate
nTPM: 73.1
Samples: 4

Max nTPM: 78.6
Min nTPM: 68.2
Sample A Female 78.6
Sample B Female 68.2
Sample C Male 73.8
Sample D Male 71.6

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