We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
335.3
nTPM
FANTOM5:
461.3
Scaled Tags Per Million
Pig:
254.4
nTPM
Allen mouse:
0.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
335.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 301.9
2301
Female, age 85, both hemispheres
394.3
2090
Male, age 80, both hemispheres
333.6
2188
Female, age 91, both hemispheres
314.0
1984
Male, age 76, both hemispheres
165.7
Dorsal cochlear nucleus nTPM: 328.3
2378
Male, age 80, both hemispheres
426.0
2058
Male, age 76, both hemispheres
333.6
2802
Male, age 74, right hemisphere
306.4
2370
Male, age 61, both hemispheres
302.1
2187
Female, age 91, both hemispheres
273.2
Dorsal tegmental nucleus nTPM: 280.0
2083
Male, age 80, both hemispheres
370.3
2326
Male, age 74, both hemispheres
293.8
2358
Male, age 61, both hemispheres
266.0
1936
Male, age 76, left hemisphere
190.1
Dorsolateral tegmental area nTPM: 324.4
2337
Male, age 61, both hemispheres
584.0
2751
Female, age 85, both hemispheres
349.0
2654
Male, age 80, both hemispheres
335.8
2360
Male, age 74, both hemispheres
202.3
2141
Male, age 76, both hemispheres
150.7
Kolliker-Fuse nucleus nTPM: 298.1
2793
Female, age 91, left hemisphere
421.8
2163
Male, age 80, both hemispheres
258.0
2315
Male, age 76, right hemisphere
214.6
Lateral lemniscal nuclei nTPM: 252.2
2320
Female, age 91, left hemisphere
344.3
2036
Male, age 80, both hemispheres
258.0
2169
Male, age 76, both hemispheres
243.2
2453
Male, age 74, right hemisphere
219.2
2746
Female, age 85, left hemisphere
196.4
Lateral parabrachial nucleus nTPM: 335.3
2792
Male, age 76, both hemispheres
537.9
2013
Male, age 80, both hemispheres
323.8
2790
Male, age 61, both hemispheres
250.6
2139
Female, age 85, right hemisphere
229.0
Lateral vestibular nucleus nTPM: 291.7
2311
Male, age 80, both hemispheres
332.1
2184
Male, age 76, both hemispheres
251.2
Locus coeruleus nTPM: 160.1
2162
Male, age 80, both hemispheres
218.7
2720
Male, age 74, both hemispheres
213.4
2317
Female, age 72, unknown
178.5
2123
Female, age 91, both hemispheres
143.1
2788
Male, age 74, unknown
142.7
2014
Male, age 55, unknown
115.5
1980
Male, age 76, both hemispheres
108.7
Medial parabrachial nucleus nTPM: 266.8
2854
Male, age 80, both hemispheres
300.6
2463
Female, age 85, right hemisphere
284.0
2170
Female, age 91, both hemispheres
264.0
2786
Male, age 76, both hemispheres
245.8
2156
Male, age 61, both hemispheres
239.4
Medial periolivary nuclei nTPM: 250.7
2458
Female, age 91, both hemispheres
298.6
2791
Male, age 74, right hemisphere
292.5
2063
Male, age 76, both hemispheres
263.0
2081
Male, age 80, both hemispheres
237.0
2171
Female, age 85, both hemispheres
162.6
Motor facial nucleus nTPM: 293.9
2697
Female, age 85, both hemispheres
367.8
2365
Male, age 74, right hemisphere
361.1
2126
Male, age 61, both hemispheres
322.8
2795
Female, age 91, both hemispheres
273.0
2327
Male, age 80, both hemispheres
225.1
2062
Male, age 76, both hemispheres
213.7
Motor trigeminal nucleus nTPM: 248.7
2321
Female, age 91, both hemispheres
276.3
2335
Male, age 61, both hemispheres
260.5
2309
Male, age 76, both hemispheres
259.2
2560
Male, age 74, both hemispheres
259.2
2079
Male, age 80, both hemispheres
188.3
Nuclei of the trapezoid body nTPM: 227.7
2368
Female, age 91, both hemispheres
293.8
2166
Male, age 80, both hemispheres
260.6
1983
Male, age 76, both hemispheres
229.4
2159
Male, age 61, both hemispheres
215.0
2735
Female, age 85, both hemispheres
139.7
Nucleus raphe magnus nTPM: 226.1
2459
Female, age 91, both hemispheres
308.3
2328
Male, age 80, both hemispheres
305.4
2051
Male, age 76, both hemispheres
265.0
2455
Male, age 74, both hemispheres
242.9
2172
Female, age 85, both hemispheres
118.6
2160
Male, age 61, both hemispheres
116.4
Paramedian reticular nucleus nTPM: 281.2
2057
Male, age 80, both hemispheres
318.8
2052
Male, age 76, both hemispheres
288.5
2313
Male, age 61, both hemispheres
276.5
2050
Female, age 85, both hemispheres
241.1
Pedunculopontine tegmental nucleus nTPM: 285.6
2334
Male, age 80, both hemispheres
307.4
2338
Male, age 61, both hemispheres
303.3
1921
Female, age 85, both hemispheres
246.0
Pontine nuclei nTPM: 242.0
2454
Male, age 74, left hemisphere
355.4
2319
Female, age 91, both hemispheres
331.4
2109
Female, age 72, unknown
257.9
1863
Male, age 55, unknown
244.9
2115
Male, age 80, left hemisphere
227.8
1968
Male, age 76, left hemisphere
218.6
2787
Female, age 85, both hemispheres
158.1
2727
Male, age 61, right hemisphere
141.5
Pontine raphe nucleus nTPM: 205.5
2853
Male, age 76, midline
233.9
2122
Female, age 85, midline
177.0
Posteroventral cochlear nucleus nTPM: 329.1
2070
Male, age 76, both hemispheres
383.3
2341
Male, age 80, both hemispheres
382.3
2371
Male, age 61, both hemispheres
345.3
2135
Female, age 91, both hemispheres
308.3
2752
Female, age 85, both hemispheres
226.1
Principal sensory trigeminal nucleus nTPM: 221.9
2367
Female, age 91, left hemisphere
305.2
2324
Male, age 76, both hemispheres
262.1
2008
Male, age 80, left hemisphere
166.6
2158
Male, age 61, both hemispheres
153.9
Reticular pontine nucleus, caudal nTPM: 294.8
2457
Female, age 91, both hemispheres
346.8
2092
Male, age 76, both hemispheres
334.6
2559
Male, age 74, both hemispheres
319.5
2332
Male, age 80, right hemisphere
178.5
Reticular pontine nucleus, oral nTPM: 331.6
2366
Female, age 91, both hemispheres
438.3
1939
Male, age 80, both hemispheres
349.4
2167
Male, age 76, both hemispheres
343.9
2361
Male, age 74, both hemispheres
274.8
2012
Female, age 85, both hemispheres
251.8
Reticulotegmental nucleus nTPM: 239.7
2333
Male, age 80, both hemispheres
293.7
2322
Female, age 91, both hemispheres
278.9
2452
Male, age 74, both hemispheres
247.3
2325
Male, age 76, both hemispheres
139.1
Spinal trigeminal nucleus, oral nTPM: 271.1
1978
Male, age 76, both hemispheres
335.9
2164
Male, age 80, both hemispheres
290.7
2737
Female, age 85, both hemispheres
186.7
Subcoeruleus area nTPM: 267.6
2369
Female, age 85, left hemisphere
438.1
2323
Female, age 91, left hemisphere
254.2
1958
Male, age 80, both hemispheres
225.3
2451
Male, age 74, both hemispheres
223.2
2089
Male, age 76, left hemisphere
197.5
Superior olive nTPM: 291.3
2020
Male, age 76, both hemispheres
347.2
2364
Male, age 74, right hemisphere
326.4
2561
Female, age 91, both hemispheres
288.7
2329
Male, age 80, right hemisphere
282.9
1875
Female, age 85, both hemispheres
211.5
Ventral periolivary nuclei nTPM: 266.2
2023
Male, age 76, both hemispheres
403.5
2165
Male, age 80, both hemispheres
247.6
2130
Female, age 85, both hemispheres
207.5
2794
Female, age 91, left hemisphere
206.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 318.0
2359
Male, age 61, both hemispheres
439.5
2456
Female, age 91, both hemispheres
367.5
1959
Male, age 76, both hemispheres
310.1
2840
Female, age 85, both hemispheres
285.1
2161
Male, age 80, both hemispheres
262.5
2449
Male, age 74, both hemispheres
243.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
254.4
Pig sample
Sample description
nTPM
Pons nTPM: 254.4
Samples: 4
Max nTPM: 279.7
Min nTPM: 199.5
Sample A
Female
264.0
Sample B
Female
199.5
Sample C
Male
279.7
Sample D
Male
274.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
