PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:466.4 nTPM
FANTOM5:461.3 Scaled Tags Per Million
Pig:260.6 nTPM
Mouse:5.7 nTPM
Allen mouse:0.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 466.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 301.9
2301 Female, age 85, both hemispheres 394.3
2090 Male, age 80, both hemispheres 333.6
2188 Female, age 91, both hemispheres 314.0
1984 Male, age 76, both hemispheres 165.7
Area postrema
nTPM: 287.3
2306 Male, age 80, both hemispheres 415.0
2799 Male, age 61, both hemispheres 226.0
2054 Male, age 76, both hemispheres 220.8
Dorsal cochlear nucleus
nTPM: 328.3
2378 Male, age 80, both hemispheres 426.0
2058 Male, age 76, both hemispheres 333.6
2802 Male, age 74, right hemisphere 306.4
2370 Male, age 61, both hemispheres 302.1
2187 Female, age 91, both hemispheres 273.2
Dorsal medullary reticular nucleus
nTPM: 377.2
2373 Male, age 61, both hemispheres 428.2
2040 Female, age 85, both hemispheres 387.5
2088 Male, age 76, both hemispheres 316.0
Dorsal motor vagal complex
nTPM: 299.0
2797 Male, age 61, both hemispheres 367.2
2185 Male, age 76, both hemispheres 363.5
2000 Male, age 74, unknown 326.4
2807 Female, age 85, both hemispheres 322.0
2133 Female, age 91, both hemispheres 290.6
2643 Male, age 74, both hemispheres 278.4
2813 Female, age 72, unknown 258.6
2844 Male, age 55, unknown 185.2
Dorsal tegmental nucleus
nTPM: 280.0
2083 Male, age 80, both hemispheres 370.3
2326 Male, age 74, both hemispheres 293.8
2358 Male, age 61, both hemispheres 266.0
1936 Male, age 76, left hemisphere 190.1
Dorsolateral tegmental area
nTPM: 324.4
2337 Male, age 61, both hemispheres 584.0
2751 Female, age 85, both hemispheres 349.0
2654 Male, age 80, both hemispheres 335.8
2360 Male, age 74, both hemispheres 202.3
2141 Male, age 76, both hemispheres 150.7
Gigantocellular reticular nuclei, medullary
nTPM: 346.8
2314 Male, age 61, both hemispheres 468.8
2387 Female, age 91, both hemispheres 415.3
1876 Female, age 85, both hemispheres 357.5
2022 Male, age 76, right hemisphere 356.0
2310 Male, age 80, both hemispheres 290.6
2462 Male, age 74, both hemispheres 192.6
Gigantocellular reticular nuclei, pars
nTPM: 278.9
2336 Male, age 61, both hemispheres 350.7
2330 Male, age 80, both hemispheres 299.4
2706 Male, age 80, both hemispheres 297.5
2084 Female, age 85, both hemispheres 254.1
2168 Male, age 76, both hemispheres 192.7
Inferior olive
nTPM: 391.2
2178 Male, age 61, both hemispheres 466.1
2628 Female, age 91, both hemispheres 423.2
2379 Male, age 80, both hemispheres 361.8
2563 Male, age 74, both hemispheres 353.8
2085 Female, age 85, both hemispheres 351.3
Kolliker-Fuse nucleus
nTPM: 298.1
2793 Female, age 91, left hemisphere 421.8
2163 Male, age 80, both hemispheres 258.0
2315 Male, age 76, right hemisphere 214.6
Lateral lemniscal nuclei
nTPM: 252.2
2320 Female, age 91, left hemisphere 344.3
2036 Male, age 80, both hemispheres 258.0
2169 Male, age 76, both hemispheres 243.2
2453 Male, age 74, right hemisphere 219.2
2746 Female, age 85, left hemisphere 196.4
Lateral medullary reticular nucleus
nTPM: 416.0
2374 Male, age 61, both hemispheres 575.3
2852 Male, age 80, both hemispheres 449.1
2044 Male, age 76, both hemispheres 401.6
2190 Female, age 85, both hemispheres 396.4
2305 Male, age 74, both hemispheres 356.8
2804 Female, age 91, both hemispheres 316.8
Lateral parabrachial nucleus
nTPM: 335.3
2792 Male, age 76, both hemispheres 537.9
2013 Male, age 80, both hemispheres 323.8
2790 Male, age 61, both hemispheres 250.6
2139 Female, age 85, right hemisphere 229.0
Lateral vestibular nucleus
nTPM: 291.7
2311 Male, age 80, both hemispheres 332.1
2184 Male, age 76, both hemispheres 251.2
Locus coeruleus
nTPM: 160.1
2162 Male, age 80, both hemispheres 218.7
2720 Male, age 74, both hemispheres 213.4
2317 Female, age 72, unknown 178.5
2123 Female, age 91, both hemispheres 143.1
2788 Male, age 74, unknown 142.7
2014 Male, age 55, unknown 115.5
1980 Male, age 76, both hemispheres 108.7
Medial olivary nucleus
nTPM: 390.3
1943 Male, age 61, both hemispheres 532.4
2851 Male, age 80, both hemispheres 381.9
2138 Female, age 91, both hemispheres 336.4
1962 Male, age 76, both hemispheres 310.5
Medial parabrachial nucleus
nTPM: 266.8
2854 Male, age 80, both hemispheres 300.6
2463 Female, age 85, right hemisphere 284.0
2170 Female, age 91, both hemispheres 264.0
2786 Male, age 76, both hemispheres 245.8
2156 Male, age 61, both hemispheres 239.4
Medial periolivary nuclei
nTPM: 250.7
2458 Female, age 91, both hemispheres 298.6
2791 Male, age 74, right hemisphere 292.5
2063 Male, age 76, both hemispheres 263.0
2081 Male, age 80, both hemispheres 237.0
2171 Female, age 85, both hemispheres 162.6
Medial vestibular nucleus
nTPM: 327.3
2803 Female, age 91, both hemispheres 439.2
2624 Male, age 61, both hemispheres 379.4
2801 Male, age 74, both hemispheres 360.6
2093 Male, age 80, both hemispheres 357.4
2743 Female, age 85, both hemispheres 236.5
2134 Male, age 76, both hemispheres 190.6
Motor facial nucleus
nTPM: 293.9
2697 Female, age 85, both hemispheres 367.8
2365 Male, age 74, right hemisphere 361.1
2126 Male, age 61, both hemispheres 322.8
2795 Female, age 91, both hemispheres 273.0
2327 Male, age 80, both hemispheres 225.1
2062 Male, age 76, both hemispheres 213.7
Motor hypoglossal nucleus
nTPM: 343.8
2132 Female, age 85, both hemispheres 448.4
2182 Male, age 80, both hemispheres 411.2
2125 Female, age 91, both hemispheres 407.6
2461 Male, age 61, both hemispheres 311.2
2277 Male, age 76, both hemispheres 140.6
Motor trigeminal nucleus
nTPM: 248.7
2321 Female, age 91, both hemispheres 276.3
2335 Male, age 61, both hemispheres 260.5
2309 Male, age 76, both hemispheres 259.2
2560 Male, age 74, both hemispheres 259.2
2079 Male, age 80, both hemispheres 188.3
Nuclei of the trapezoid body
nTPM: 227.7
2368 Female, age 91, both hemispheres 293.8
2166 Male, age 80, both hemispheres 260.6
1983 Male, age 76, both hemispheres 229.4
2159 Male, age 61, both hemispheres 215.0
2735 Female, age 85, both hemispheres 139.7
Nucleus ambiguus
nTPM: 384.2
2071 Male, age 76, both hemispheres 448.7
2096 Female, age 85, both hemispheres 319.7
Nucleus cuneatus
nTPM: 345.5
2381 Male, age 80, both hemispheres 435.6
2380 Male, age 80, both hemispheres 415.4
2808 Female, age 85, both hemispheres 403.9
2376 Male, age 61, both hemispheres 372.2
2100 Male, age 76, both hemispheres 328.2
2562 Male, age 61, both hemispheres 301.0
2805 Female, age 91, both hemispheres 297.1
2564 Male, age 74, both hemispheres 278.6
2131 Male, age 76, both hemispheres 277.6
Nucleus gracilis
nTPM: 430.0
2382 Male, age 80, both hemispheres 547.8
2299 Female, age 85, both hemispheres 390.2
2627 Male, age 74, both hemispheres 352.1
Nucleus raphe magnus
nTPM: 226.1
2459 Female, age 91, both hemispheres 308.3
2328 Male, age 80, both hemispheres 305.4
2051 Male, age 76, both hemispheres 265.0
2455 Male, age 74, both hemispheres 242.9
2172 Female, age 85, both hemispheres 118.6
2160 Male, age 61, both hemispheres 116.4
Nucleus raphe obscurus
nTPM: 412.4
2800 Male, age 61, midline 458.5
2845 Female, age 85, midline 453.8
2142 Male, age 76, midline 324.9
Nucleus raphe pallidus
nTPM: 345.9
1924 Male, age 61, midline 385.9
2183 Male, age 80, midline 362.0
2145 Male, age 76, midline 289.6
Nucleus tractus solitarii
nTPM: 202.2
2307 Male, age 80, both hemispheres 248.1
2191 Female, age 85, both hemispheres 217.2
2656 Male, age 76, both hemispheres 188.3
2144 Female, age 91, right hemisphere 155.2
Paramedian reticular nucleus
nTPM: 281.2
2057 Male, age 80, both hemispheres 318.8
2052 Male, age 76, both hemispheres 288.5
2313 Male, age 61, both hemispheres 276.5
2050 Female, age 85, both hemispheres 241.1
Parvicellular reticular nuclei
nTPM: 225.8
2119 Male, age 80, both hemispheres 272.6
2095 Male, age 76, both hemispheres 250.0
2558 Male, age 74, both hemispheres 154.8
Parvicellular reticular nuclei, medullary
nTPM: 308.9
2189 Female, age 91, both hemispheres 323.6
2181 Male, age 80, left hemisphere 305.3
2091 Female, age 85, both hemispheres 297.8
Pedunculopontine tegmental nucleus
nTPM: 285.6
2334 Male, age 80, both hemispheres 307.4
2338 Male, age 61, both hemispheres 303.3
1921 Female, age 85, both hemispheres 246.0
Peritrigeminal nucleus
nTPM: 356.7
2179 Male, age 61, both hemispheres 381.3
2136 Male, age 76, both hemispheres 348.4
2067 Female, age 85, both hemispheres 340.5
Pontine nuclei
nTPM: 242.0
2454 Male, age 74, left hemisphere 355.4
2319 Female, age 91, both hemispheres 331.4
2109 Female, age 72, unknown 257.9
1863 Male, age 55, unknown 244.9
2115 Male, age 80, left hemisphere 227.8
1968 Male, age 76, left hemisphere 218.6
2787 Female, age 85, both hemispheres 158.1
2727 Male, age 61, right hemisphere 141.5
Pontine raphe nucleus
nTPM: 205.5
2853 Male, age 76, midline 233.9
2122 Female, age 85, midline 177.0
Posteroventral cochlear nucleus
nTPM: 329.1
2070 Male, age 76, both hemispheres 383.3
2341 Male, age 80, both hemispheres 382.3
2371 Male, age 61, both hemispheres 345.3
2135 Female, age 91, both hemispheres 308.3
2752 Female, age 85, both hemispheres 226.1
Prepositus hypoglossal nucleus
nTPM: 315.6
2855 Female, age 85, right hemisphere 363.1
2086 Male, age 80, both hemispheres 268.1
Principal sensory trigeminal nucleus
nTPM: 221.9
2367 Female, age 91, left hemisphere 305.2
2324 Male, age 76, both hemispheres 262.1
2008 Male, age 80, left hemisphere 166.6
2158 Male, age 61, both hemispheres 153.9
Reticular pontine nucleus, caudal
nTPM: 294.8
2457 Female, age 91, both hemispheres 346.8
2092 Male, age 76, both hemispheres 334.6
2559 Male, age 74, both hemispheres 319.5
2332 Male, age 80, right hemisphere 178.5
Reticular pontine nucleus, oral
nTPM: 331.6
2366 Female, age 91, both hemispheres 438.3
1939 Male, age 80, both hemispheres 349.4
2167 Male, age 76, both hemispheres 343.9
2361 Male, age 74, both hemispheres 274.8
2012 Female, age 85, both hemispheres 251.8
Reticulotegmental nucleus
nTPM: 239.7
2333 Male, age 80, both hemispheres 293.7
2322 Female, age 91, both hemispheres 278.9
2452 Male, age 74, both hemispheres 247.3
2325 Male, age 76, both hemispheres 139.1
Spinal trigeminal nucleus, caudal
nTPM: 361.7
2312 Male, age 61, both hemispheres 440.3
2308 Male, age 80, both hemispheres 412.9
2390 Female, age 91, both hemispheres 348.6
2447 Male, age 76, both hemispheres 307.3
2642 Male, age 74, both hemispheres 299.5
Spinal trigeminal nucleus, interpolar
nTPM: 291.4
2386 Female, age 85, both hemispheres 345.8
2033 Male, age 80, both hemispheres 316.8
2389 Female, age 91, both hemispheres 312.5
2625 Male, age 61, both hemispheres 245.4
2066 Male, age 76, right hemisphere 236.4
Spinal trigeminal nucleus, oral
nTPM: 271.1
1978 Male, age 76, both hemispheres 335.9
2164 Male, age 80, both hemispheres 290.7
2737 Female, age 85, both hemispheres 186.7
Spinal vestibular nucleus
nTPM: 396.6
2748 Male, age 76, both hemispheres 520.5
2806 Female, age 85, both hemispheres 453.0
2186 Female, age 91, both hemispheres 403.1
2780 Male, age 80, both hemispheres 353.5
2384 Male, age 74, both hemispheres 339.9
2796 Male, age 61, both hemispheres 309.4
Subcoeruleus area
nTPM: 267.6
2369 Female, age 85, left hemisphere 438.1
2323 Female, age 91, left hemisphere 254.2
1958 Male, age 80, both hemispheres 225.3
2451 Male, age 74, both hemispheres 223.2
2089 Male, age 76, left hemisphere 197.5
Superior olive
nTPM: 291.3
2020 Male, age 76, both hemispheres 347.2
2364 Male, age 74, right hemisphere 326.4
2561 Female, age 91, both hemispheres 288.7
2329 Male, age 80, right hemisphere 282.9
1875 Female, age 85, both hemispheres 211.5
Superior vestibular nucleus
nTPM: 259.5
2015 Male, age 80, both hemispheres 307.9
2061 Male, age 76, both hemispheres 235.4
2383 Male, age 74, both hemispheres 235.2
Ventral medullary reticular nucleus
nTPM: 466.4
2372 Male, age 61, both hemispheres 505.6
2060 Male, age 76, both hemispheres 427.3
Ventral periolivary nuclei
nTPM: 266.2
2023 Male, age 76, both hemispheres 403.5
2165 Male, age 80, both hemispheres 247.6
2130 Female, age 85, both hemispheres 207.5
2794 Female, age 91, left hemisphere 206.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 367.5
2118 Male, age 80, both hemispheres 426.8
2180 Male, age 61, both hemispheres 414.7
2302 Female, age 91, both hemispheres 336.8
1986 Male, age 76, both hemispheres 333.6
2741 Female, age 85, both hemispheres 325.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 318.0
2359 Male, age 61, both hemispheres 439.5
2456 Female, age 91, both hemispheres 367.5
1959 Male, age 76, both hemispheres 310.1
2840 Female, age 85, both hemispheres 285.1
2161 Male, age 80, both hemispheres 262.5
2449 Male, age 74, both hemispheres 243.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 461.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 295.5
FF:10165-103B3 76 years, female 305.5
FF:10182-103D2 60 years, female 285.4
Medulla oblongata
Scaled Tags Per Million: 351.5
FF:10038-101F2 18-64 years, mixed 526.4
FF:10174-103C3 60 years, female 328.3
FF:10155-103A2 76 years, female 199.8
Pons
Scaled Tags Per Million: 461.3
FF:10033-101E6 18-54 years, mixed 461.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 260.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 260.6
Samples: 4

Max nTPM: 333.6
Min nTPM: 181.5
Sample A Female 181.5
Sample B Female 255.6
Sample C Male 271.6
Sample D Male 333.6
Pons
nTPM: 254.4
Samples: 4

Max nTPM: 279.7
Min nTPM: 199.5
Sample A Female 264.0
Sample B Female 199.5
Sample C Male 279.7
Sample D Male 274.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 5.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 5.7
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.2
Sample A Male 5.5
Sample B Male 6.7
Sample C Female 5.4
Sample D Female 5.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
68522503 Antisense, RP_050118_02_B09, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.2
68522503 Antisense, RP_050118_02_B09, Mouse strain C57BL/6J (56 days, male) 0.2

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