HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:1034.7 nTPM
HPA Brain:902.1 nTPM
GTEx:1034.7 nTPM
FANTOM5:1014.5 Scaled Tags Per Million
Pig:1483.0 nTPM
Mouse:606.4 nTPM
Allen mouse:25.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065539Antibody HPA068768Antibody CAB008363Antibody CAB069921
Glial cells MediumMediumMediumMedium
Neuronal cells MediumMediumHighHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 902.1
Sample id Sample description nTPM
Hippocampus
nTPM: 902.1
2529 Female, age 94, left hemisphere 1130.8
2148 Female, age 91, left hemisphere 1006.8
1855 Male, age 76, left hemisphere 885.9
1898 Male, age 80, left hemisphere 868.1
1911 Female, age 85, right hemisphere 767.3
2621 Female, age 67, right hemisphere 753.6
Dentate gyrus
nTPM: 695.7
2528 Male, age 74, both hemispheres 869.6
2246 Female, age 85, both hemispheres 745.7
2530 Female, age 94, left hemisphere 715.1
2010 Male, age 76, both hemispheres 711.1
1927 Female, age 91, both hemispheres 575.0
2531 Female, age 67, both hemispheres 557.5
Entorhinal gyrus
nTPM: 832.6
2117 Female, age 91, right hemisphere 1673.1
1787 Male, age 76, left hemisphere 831.2
1938 Female, age 85, left hemisphere 765.4
2764 Male, age 80, right hemisphere 682.9
2613 Female, age 94, left hemisphere 560.4
2686 Male, age 75, right hemisphere 482.3
Hippocampus, CA1
nTPM: 777.1
2527 Male, age 74, both hemispheres 1275.6
2082 Female, age 91, right hemisphere 756.4
2045 Male, age 76, both hemispheres 698.1
1873 Female, age 85, both hemispheres 629.9
2749 Male, age 80, left hemisphere 525.7
Hippocampus, CA2
nTPM: 771.5
1940 Female, age 85, left hemisphere 1034.5
2113 Female, age 91, right hemisphere 973.0
2249 Male, age 74, both hemispheres 834.6
1963 Male, age 80, left hemisphere 658.4
2437 Female, age 94, left hemisphere 652.5
1892 Male, age 76, both hemispheres 475.7
Hippocampus, CA3
nTPM: 680.0
2436 Male, age 74, both hemispheres 844.6
2861 Female, age 67, both hemispheres 777.4
1867 Male, age 76, both hemispheres 686.2
1891 Female, age 85, both hemispheres 664.0
2620 Female, age 94, left hemisphere 622.1
2137 Male, age 80, left hemisphere 485.4
Parahippocampal cortex
nTPM: 752.7
2250 Female, age 67, right hemisphere 1006.5
2018 Male, age 76, both hemispheres 926.1
2245 Female, age 91, both hemispheres 856.5
2692 Male, age 74, both hemispheres 820.4
1933 Female, age 85, both hemispheres 812.7
1990 Female, age 91, right hemisphere 768.1
2622 Female, age 67, right hemisphere 733.8
2532 Female, age 72, left hemisphere 627.8
1850 Male, age 80, both hemispheres 548.4
2693 Female, age 94, both hemispheres 426.4
Perirhinal gyrus
nTPM: 616.7
1847 Female, age 91, left hemisphere 846.9
1794 Male, age 80, right hemisphere 692.6
2521 Female, age 94, right hemisphere 580.0
2848 Male, age 76, right hemisphere 485.2
1841 Female, age 85, right hemisphere 478.9
Subiculum
nTPM: 870.4
2729 Female, age 91, right hemisphere 1185.3
2619 Male, age 74, both hemispheres 1027.2
2042 Male, age 76, both hemispheres 851.7
2438 Female, age 94, left hemisphere 758.7
1901 Male, age 80, both hemispheres 718.9
1977 Female, age 85, both hemispheres 680.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1034.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1034.7
Samples: 197

Max nTPM: 3213.3
Min nTPM: 155.2
Std nTPM: 569.7
Median nTPM: 884.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 3213.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 3065.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 2651.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 2551.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 2362.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2352.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 2349.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 2349.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 2282.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 2273.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 2259.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1014.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1014.5
FF:10153-102I9 76 years, female 1018.5
FF:10169-103B7 60 years, female 1010.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1483.0
Pig sample Sample description nTPM
Subiculum
nTPM: 1483.0
Samples: 4

Max nTPM: 1990.8
Min nTPM: 1031.9
Sample A Female 1990.8
Sample B Female 1499.5
Sample C Male 1409.7
Sample D Male 1031.9
Dorsal hippocampus
nTPM: 1146.5
Samples: 4

Max nTPM: 1409.8
Min nTPM: 899.3
Sample A Female 1409.8
Sample B Female 1044.7
Sample C Male 1232.0
Sample D Male 899.3
Entorhinal cortex
nTPM: 1206.9
Samples: 4

Max nTPM: 1496.9
Min nTPM: 986.1
Sample A Female 1053.8
Sample B Female 1290.9
Sample C Male 1496.9
Sample D Male 986.1
Ventral hippocampus
nTPM: 1453.3
Samples: 4

Max nTPM: 1867.6
Min nTPM: 1080.8
Sample A Female 1426.9
Sample B Female 1438.0
Sample C Male 1867.6
Sample D Male 1080.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 606.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 606.4
Samples: 4

Max nTPM: 635.3
Min nTPM: 575.4
Sample A Male 635.3
Sample B Male 582.0
Sample C Female 632.7
Sample D Female 575.4
Hippocampal formation
nTPM: 602.6
Samples: 4

Max nTPM: 638.5
Min nTPM: 534.1
Sample A Male 638.5
Sample B Male 606.4
Sample C Female 534.1
Sample D Female 631.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 25.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.2
67936406 Antisense, RP_040604_02_C10, Mouse strain C57BL/6J (56 days, male) 30.0
77620395 Antisense, RP_070205_01_F04, Mouse strain C57BL/6J (56 days, male) 20.5
79490110 Antisense, RP_070205_01_F04, Mouse strain C57BL/6J (56 days, male) 17.6

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