HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		67.196
RNA expressioni
Consensus:3834.0 nTPM
HPA Brain:7352.6 nTPM
GTEx:3834.0 nTPM
FANTOM5:3985.9 Scaled Tags Per Million
Pig:2579.3 nTPM
Mouse:288.5 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056030Antibody HPA063513Antibody CAB000039
Glial cells MediumLowMedium
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB000039
Hippocampal formation mean intensity 67.196
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 52.374
Molecular layer of the dentate gyrus 40.826
Granular dentate gyrus 40.245
CA1 - oriens layer 45.911
CA1 - pyramidal layer 40.740
CA1 - radiatum layer 45.827
CA2 - oriens layer 56.503
CA2 - pyramidal layer 51.837
CA2 - radiatum layer 49.007
CA3 - oriens layer 47.232
CA3 - pyramidal layer 36.212
CA3 - radiatum layer 62.590
Stratum lucidum 42.625
Lacunosum moleculare 42.647
Subiculum 35.168

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 7352.6
Sample id Sample description nTPM
Hippocampus
nTPM: 7352.6
1898 Male, age 80, left hemisphere 8240.9
2529 Female, age 94, left hemisphere 8218.5
2148 Female, age 91, left hemisphere 7967.4
1855 Male, age 76, left hemisphere 7548.6
1911 Female, age 85, right hemisphere 6880.2
2621 Female, age 67, right hemisphere 5260.0
Dentate gyrus
nTPM: 6558.4
2528 Male, age 74, both hemispheres 9094.6
2530 Female, age 94, left hemisphere 7364.6
2010 Male, age 76, both hemispheres 7199.1
2246 Female, age 85, both hemispheres 5757.8
2531 Female, age 67, both hemispheres 5634.7
1927 Female, age 91, both hemispheres 4299.8
Entorhinal gyrus
nTPM: 4484.0
2117 Female, age 91, right hemisphere 10107.4
2686 Male, age 75, right hemisphere 4711.4
1787 Male, age 76, left hemisphere 4240.4
1938 Female, age 85, left hemisphere 3124.3
2764 Male, age 80, right hemisphere 3107.1
2613 Female, age 94, left hemisphere 1613.3
Hippocampus, CA1
nTPM: 5524.1
1873 Female, age 85, both hemispheres 8610.0
2082 Female, age 91, right hemisphere 5678.2
2045 Male, age 76, both hemispheres 5210.1
2527 Male, age 74, both hemispheres 5196.8
2749 Male, age 80, left hemisphere 2925.4
Hippocampus, CA2
nTPM: 5552.7
2437 Female, age 94, left hemisphere 6874.5
2249 Male, age 74, both hemispheres 6468.6
2113 Female, age 91, right hemisphere 6239.5
1963 Male, age 80, left hemisphere 5422.5
1940 Female, age 85, left hemisphere 5190.1
1892 Male, age 76, both hemispheres 3121.0
Hippocampus, CA3
nTPM: 4999.9
2620 Female, age 94, left hemisphere 7012.4
2861 Female, age 67, both hemispheres 6532.4
1891 Female, age 85, both hemispheres 6421.3
2436 Male, age 74, both hemispheres 3768.0
1867 Male, age 76, both hemispheres 3601.0
2137 Male, age 80, left hemisphere 2664.6
Parahippocampal cortex
nTPM: 3298.9
2018 Male, age 76, both hemispheres 5290.1
2250 Female, age 67, right hemisphere 4380.8
2692 Male, age 74, both hemispheres 3861.8
2245 Female, age 91, both hemispheres 3412.2
1990 Female, age 91, right hemisphere 3387.1
1933 Female, age 85, both hemispheres 2849.0
1850 Male, age 80, both hemispheres 2824.3
2693 Female, age 94, both hemispheres 2489.5
2622 Female, age 67, right hemisphere 2295.3
2532 Female, age 72, left hemisphere 2198.5
Perirhinal gyrus
nTPM: 2775.6
2521 Female, age 94, right hemisphere 3772.7
1794 Male, age 80, right hemisphere 2877.3
1841 Female, age 85, right hemisphere 2472.3
2848 Male, age 76, right hemisphere 2402.5
1847 Female, age 91, left hemisphere 2353.3
Subiculum
nTPM: 5699.6
2729 Female, age 91, right hemisphere 11035.2
2042 Male, age 76, both hemispheres 6843.5
2619 Male, age 74, both hemispheres 4758.3
1901 Male, age 80, both hemispheres 4557.1
1977 Female, age 85, both hemispheres 3595.5
2438 Female, age 94, left hemisphere 3408.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3834.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3834.0
Samples: 197

Max nTPM: 16305.7
Min nTPM: 437.8
Std nTPM: 2264.6
Median nTPM: 3425.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 16305.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 15516.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 11241.3
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 10375.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 10062.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 9215.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 8742.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 8620.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 7893.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 7576.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 7413.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 3985.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 3985.9
FF:10153-102I9 76 years, female 5169.8
FF:10169-103B7 60 years, female 2802.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 2579.3
Pig sample Sample description nTPM
Subiculum
nTPM: 1740.4
Samples: 4

Max nTPM: 2001.7
Min nTPM: 1458.2
Sample A Female 1685.0
Sample B Female 2001.7
Sample C Male 1816.7
Sample D Male 1458.2
Dorsal hippocampus
nTPM: 2485.4
Samples: 4

Max nTPM: 2848.4
Min nTPM: 1857.0
Sample A Female 2797.0
Sample B Female 2439.3
Sample C Male 2848.4
Sample D Male 1857.0
Entorhinal cortex
nTPM: 1134.7
Samples: 4

Max nTPM: 1370.5
Min nTPM: 609.2
Sample A Female 1370.5
Sample B Female 1274.3
Sample C Male 1284.7
Sample D Male 609.2
Ventral hippocampus
nTPM: 2579.3
Samples: 4

Max nTPM: 3375.0
Min nTPM: 1909.4
Sample A Female 2877.1
Sample B Female 2155.7
Sample C Male 3375.0
Sample D Male 1909.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 288.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 166.6
Samples: 4

Max nTPM: 216.3
Min nTPM: 136.5
Sample A Male 171.5
Sample B Male 136.5
Sample C Female 216.3
Sample D Female 141.9
Hippocampal formation
nTPM: 288.5
Samples: 4

Max nTPM: 307.5
Min nTPM: 267.0
Sample A Male 277.0
Sample B Male 267.0
Sample C Female 302.5
Sample D Female 307.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
1358 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 4.3
1357 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 4.1
79591671 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 3.2
79913385 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 2.2

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