PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		60.766
Mouse brain, Intensity
Ponsi 		80.082
RNA expressioni
HPA Brain:25263.2 nTPM
FANTOM5:9632.9 Scaled Tags Per Million
Pig:6658.4 nTPM
Mouse:597.9 nTPM
Allen mouse:5.2 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody CAB000039
Medulla oblongata mean intensity 60.766
intensityi
FRONT BACK
Nucleus of the solitary tract 43.724
Raphe magnus nucleus 19.180
Cochlear nucleus 26.272
Lateral paragigantocellular nucleus 15.587
Raphe pallidus nucleus 18.534
Facial nucleus 25.158
Hypoglossal nucleus 17.877
Ambiguus nucleus 15.745
External cuneate nucleus 29.011
Inferior olivary nucleus 17.983
Raphe obscures nucleus 18.247
Dorsal motor nucleus of vagus 49.470
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 13.806
Parabrachial nucleus 42.916
Principle sensory trigeminal nucleus 11.575
Locus coeruleus 67.724
Pontine nucleus 28.747
Vestibular nucleus 18.840
Pontine reticular nucleus, oral 12.527
Lateral lemniscus 12.145
Superior paraolivary nucleus 25.773

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 25263.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 7310.2
2090 Male, age 80, both hemispheres 9564.5
2301 Female, age 85, both hemispheres 8972.2
1984 Male, age 76, both hemispheres 6455.1
2188 Female, age 91, both hemispheres 4249.0
Area postrema
nTPM: 25263.2
2799 Male, age 61, both hemispheres 43545.2
2306 Male, age 80, both hemispheres 19863.0
2054 Male, age 76, both hemispheres 12381.4
Dorsal cochlear nucleus
nTPM: 10023.8
2058 Male, age 76, both hemispheres 12712.1
2802 Male, age 74, right hemisphere 11829.9
2378 Male, age 80, both hemispheres 10709.4
2370 Male, age 61, both hemispheres 8423.1
2187 Female, age 91, both hemispheres 6444.4
Dorsal medullary reticular nucleus
nTPM: 8853.1
2373 Male, age 61, both hemispheres 9324.5
2040 Female, age 85, both hemispheres 8693.1
2088 Male, age 76, both hemispheres 8541.6
Dorsal motor vagal complex
nTPM: 14672.1
2797 Male, age 61, both hemispheres 22252.5
2643 Male, age 74, both hemispheres 19255.6
2813 Female, age 72, unknown 16562.3
2185 Male, age 76, both hemispheres 13801.5
2000 Male, age 74, unknown 12826.8
2807 Female, age 85, both hemispheres 12749.5
2844 Male, age 55, unknown 12141.2
2133 Female, age 91, both hemispheres 7787.6
Dorsal tegmental nucleus
nTPM: 7894.4
1936 Male, age 76, left hemisphere 8480.2
2326 Male, age 74, both hemispheres 8338.4
2358 Male, age 61, both hemispheres 7988.1
2083 Male, age 80, both hemispheres 6770.9
Dorsolateral tegmental area
nTPM: 6694.9
2360 Male, age 74, both hemispheres 8616.3
2141 Male, age 76, both hemispheres 7079.9
2654 Male, age 80, both hemispheres 7053.8
2337 Male, age 61, both hemispheres 5892.8
2751 Female, age 85, both hemispheres 4831.6
Gigantocellular reticular nuclei, medullary
nTPM: 7098.0
2314 Male, age 61, both hemispheres 12973.5
2462 Male, age 74, both hemispheres 7299.0
2022 Male, age 76, right hemisphere 6188.1
1876 Female, age 85, both hemispheres 6044.5
2387 Female, age 91, both hemispheres 5412.4
2310 Male, age 80, both hemispheres 4670.6
Gigantocellular reticular nuclei, pars
nTPM: 6683.1
2084 Female, age 85, both hemispheres 8129.9
2706 Male, age 80, both hemispheres 7537.3
2330 Male, age 80, both hemispheres 7304.7
2336 Male, age 61, both hemispheres 6126.5
2168 Male, age 76, both hemispheres 4317.2
Inferior olive
nTPM: 18068.9
2085 Female, age 85, both hemispheres 20530.2
2379 Male, age 80, both hemispheres 20040.6
2563 Male, age 74, both hemispheres 19108.9
2178 Male, age 61, both hemispheres 17753.9
2628 Female, age 91, both hemispheres 12910.8
Kolliker-Fuse nucleus
nTPM: 8594.9
2315 Male, age 76, right hemisphere 16724.0
2163 Male, age 80, both hemispheres 5441.4
2793 Female, age 91, left hemisphere 3619.1
Lateral lemniscal nuclei
nTPM: 3701.0
2746 Female, age 85, left hemisphere 5957.4
2169 Male, age 76, both hemispheres 4177.2
2453 Male, age 74, right hemisphere 4086.8
2036 Male, age 80, both hemispheres 2312.3
2320 Female, age 91, left hemisphere 1971.4
Lateral medullary reticular nucleus
nTPM: 14529.4
2804 Female, age 91, both hemispheres 18228.4
2374 Male, age 61, both hemispheres 16307.5
2852 Male, age 80, both hemispheres 15096.5
2190 Female, age 85, both hemispheres 14933.2
2305 Male, age 74, both hemispheres 12903.2
2044 Male, age 76, both hemispheres 9707.4
Lateral parabrachial nucleus
nTPM: 8978.7
2139 Female, age 85, right hemisphere 10636.2
2792 Male, age 76, both hemispheres 10264.3
2013 Male, age 80, both hemispheres 8492.2
2790 Male, age 61, both hemispheres 6522.3
Lateral vestibular nucleus
nTPM: 8108.4
2311 Male, age 80, both hemispheres 9540.0
2184 Male, age 76, both hemispheres 6676.7
Locus coeruleus
nTPM: 6012.8
2317 Female, age 72, unknown 7502.5
1980 Male, age 76, both hemispheres 7219.4
2123 Female, age 91, both hemispheres 6615.2
2788 Male, age 74, unknown 5974.4
2162 Male, age 80, both hemispheres 5525.5
2014 Male, age 55, unknown 4823.6
2720 Male, age 74, both hemispheres 4429.2
Medial olivary nucleus
nTPM: 16219.4
2138 Female, age 91, both hemispheres 21763.6
1943 Male, age 61, both hemispheres 20439.9
2851 Male, age 80, both hemispheres 12639.1
1962 Male, age 76, both hemispheres 10035.2
Medial parabrachial nucleus
nTPM: 5725.6
2786 Male, age 76, both hemispheres 6462.9
2156 Male, age 61, both hemispheres 5976.3
2854 Male, age 80, both hemispheres 5646.3
2463 Female, age 85, right hemisphere 5470.7
2170 Female, age 91, both hemispheres 5071.9
Medial periolivary nuclei
nTPM: 5625.1
2791 Male, age 74, right hemisphere 7849.2
2063 Male, age 76, both hemispheres 6367.0
2081 Male, age 80, both hemispheres 6127.2
2171 Female, age 85, both hemispheres 4117.5
2458 Female, age 91, both hemispheres 3664.5
Medial vestibular nucleus
nTPM: 7820.8
2743 Female, age 85, both hemispheres 11143.3
2134 Male, age 76, both hemispheres 9316.4
2801 Male, age 74, both hemispheres 8427.9
2624 Male, age 61, both hemispheres 7705.4
2093 Male, age 80, both hemispheres 5424.9
2803 Female, age 91, both hemispheres 4906.7
Motor facial nucleus
nTPM: 5810.0
2126 Male, age 61, both hemispheres 7363.9
2365 Male, age 74, right hemisphere 6576.0
2062 Male, age 76, both hemispheres 6552.6
2795 Female, age 91, both hemispheres 6213.7
2697 Female, age 85, both hemispheres 5022.0
2327 Male, age 80, both hemispheres 3131.7
Motor hypoglossal nucleus
nTPM: 8410.1
2277 Male, age 76, both hemispheres 11224.3
2461 Male, age 61, both hemispheres 8092.5
2182 Male, age 80, both hemispheres 7939.7
2125 Female, age 91, both hemispheres 7535.7
2132 Female, age 85, both hemispheres 7258.3
Motor trigeminal nucleus
nTPM: 5021.2
2309 Male, age 76, both hemispheres 6537.6
2335 Male, age 61, both hemispheres 6478.6
2560 Male, age 74, both hemispheres 4801.5
2079 Male, age 80, both hemispheres 3668.3
2321 Female, age 91, both hemispheres 3620.2
Nuclei of the trapezoid body
nTPM: 5049.3
1983 Male, age 76, both hemispheres 7076.7
2166 Male, age 80, both hemispheres 5652.4
2735 Female, age 85, both hemispheres 4789.7
2368 Female, age 91, both hemispheres 4700.2
2159 Male, age 61, both hemispheres 3027.4
Nucleus ambiguus
nTPM: 13175.6
2071 Male, age 76, both hemispheres 15976.9
2096 Female, age 85, both hemispheres 10374.3
Nucleus cuneatus
nTPM: 11195.6
2564 Male, age 74, both hemispheres 15696.1
2808 Female, age 85, both hemispheres 15413.8
2380 Male, age 80, both hemispheres 14376.6
2562 Male, age 61, both hemispheres 11733.8
2376 Male, age 61, both hemispheres 9940.3
2805 Female, age 91, both hemispheres 9726.3
2100 Male, age 76, both hemispheres 9554.3
2381 Male, age 80, both hemispheres 7592.5
2131 Male, age 76, both hemispheres 6726.6
Nucleus gracilis
nTPM: 14726.6
2627 Male, age 74, both hemispheres 16682.2
2299 Female, age 85, both hemispheres 16521.3
2382 Male, age 80, both hemispheres 10976.2
Nucleus raphe magnus
nTPM: 4397.8
2051 Male, age 76, both hemispheres 7795.9
2455 Male, age 74, both hemispheres 5855.4
2328 Male, age 80, both hemispheres 4509.5
2160 Male, age 61, both hemispheres 3016.1
2172 Female, age 85, both hemispheres 2702.5
2459 Female, age 91, both hemispheres 2507.6
Nucleus raphe obscurus
nTPM: 12078.9
2142 Male, age 76, midline 13170.5
2845 Female, age 85, midline 11997.9
2800 Male, age 61, midline 11068.1
Nucleus raphe pallidus
nTPM: 13322.1
1924 Male, age 61, midline 23188.2
2145 Male, age 76, midline 9005.6
2183 Male, age 80, midline 7772.5
Nucleus tractus solitarii
nTPM: 10792.9
2191 Female, age 85, both hemispheres 13219.2
2307 Male, age 80, both hemispheres 11358.0
2144 Female, age 91, right hemisphere 9515.2
2656 Male, age 76, both hemispheres 9079.3
Paramedian reticular nucleus
nTPM: 6627.7
2057 Male, age 80, both hemispheres 8126.1
2052 Male, age 76, both hemispheres 7339.4
2313 Male, age 61, both hemispheres 5836.9
2050 Female, age 85, both hemispheres 5208.3
Parvicellular reticular nuclei
nTPM: 6554.5
2119 Male, age 80, both hemispheres 8709.6
2095 Male, age 76, both hemispheres 6750.4
2558 Male, age 74, both hemispheres 4203.4
Parvicellular reticular nuclei, medullary
nTPM: 6859.6
2091 Female, age 85, both hemispheres 8152.7
2181 Male, age 80, left hemisphere 6445.6
2189 Female, age 91, both hemispheres 5980.6
Pedunculopontine tegmental nucleus
nTPM: 6186.4
2334 Male, age 80, both hemispheres 6447.1
1921 Female, age 85, both hemispheres 6209.7
2338 Male, age 61, both hemispheres 5902.3
Peritrigeminal nucleus
nTPM: 14390.8
2067 Female, age 85, both hemispheres 19657.9
2136 Male, age 76, both hemispheres 12257.8
2179 Male, age 61, both hemispheres 11256.7
Pontine nuclei
nTPM: 4116.7
2109 Female, age 72, unknown 7480.2
1863 Male, age 55, unknown 5495.8
2115 Male, age 80, left hemisphere 5486.7
1968 Male, age 76, left hemisphere 4852.5
2319 Female, age 91, both hemispheres 2856.6
2787 Female, age 85, both hemispheres 2736.3
2454 Male, age 74, left hemisphere 2327.0
2727 Male, age 61, right hemisphere 1698.9
Pontine raphe nucleus
nTPM: 5560.0
2853 Male, age 76, midline 6852.3
2122 Female, age 85, midline 4267.7
Posteroventral cochlear nucleus
nTPM: 6660.3
2371 Male, age 61, both hemispheres 9198.9
2070 Male, age 76, both hemispheres 7571.0
2341 Male, age 80, both hemispheres 6448.8
2752 Female, age 85, both hemispheres 6119.4
2135 Female, age 91, both hemispheres 3963.5
Prepositus hypoglossal nucleus
nTPM: 11806.3
2086 Male, age 80, both hemispheres 13926.5
2855 Female, age 85, right hemisphere 9686.0
Principal sensory trigeminal nucleus
nTPM: 4492.2
2324 Male, age 76, both hemispheres 7789.5
2158 Male, age 61, both hemispheres 4150.8
2008 Male, age 80, left hemisphere 3523.9
2367 Female, age 91, left hemisphere 2504.6
Reticular pontine nucleus, caudal
nTPM: 4309.3
2092 Male, age 76, both hemispheres 6819.8
2559 Male, age 74, both hemispheres 4828.0
2457 Female, age 91, both hemispheres 3224.8
2332 Male, age 80, right hemisphere 2364.5
Reticular pontine nucleus, oral
nTPM: 4315.6
2167 Male, age 76, both hemispheres 6375.2
1939 Male, age 80, both hemispheres 5453.8
2012 Female, age 85, both hemispheres 4255.6
2361 Male, age 74, both hemispheres 2868.0
2366 Female, age 91, both hemispheres 2625.7
Reticulotegmental nucleus
nTPM: 5285.9
2452 Male, age 74, both hemispheres 5729.9
2325 Male, age 76, both hemispheres 5492.7
2333 Male, age 80, both hemispheres 5207.8
2322 Female, age 91, both hemispheres 4713.0
Spinal trigeminal nucleus, caudal
nTPM: 8626.2
2642 Male, age 74, both hemispheres 11697.5
2308 Male, age 80, both hemispheres 10752.6
2447 Male, age 76, both hemispheres 8144.9
2312 Male, age 61, both hemispheres 7253.4
2390 Female, age 91, both hemispheres 5282.5
Spinal trigeminal nucleus, interpolar
nTPM: 6735.3
2066 Male, age 76, right hemisphere 8711.3
2033 Male, age 80, both hemispheres 7580.0
2386 Female, age 85, both hemispheres 7469.6
2625 Male, age 61, both hemispheres 5281.3
2389 Female, age 91, both hemispheres 4634.2
Spinal trigeminal nucleus, oral
nTPM: 5941.3
1978 Male, age 76, both hemispheres 6845.1
2737 Female, age 85, both hemispheres 5713.3
2164 Male, age 80, both hemispheres 5265.4
Spinal vestibular nucleus
nTPM: 7426.6
2384 Male, age 74, both hemispheres 8399.5
2806 Female, age 85, both hemispheres 8392.4
2748 Male, age 76, both hemispheres 8156.0
2780 Male, age 80, both hemispheres 7669.8
2796 Male, age 61, both hemispheres 6559.6
2186 Female, age 91, both hemispheres 5382.1
Subcoeruleus area
nTPM: 5218.2
2451 Male, age 74, both hemispheres 7094.4
1958 Male, age 80, both hemispheres 4968.7
2369 Female, age 85, left hemisphere 4870.3
2323 Female, age 91, left hemisphere 4703.5
2089 Male, age 76, left hemisphere 4454.3
Superior olive
nTPM: 4828.1
2364 Male, age 74, right hemisphere 7400.3
2020 Male, age 76, both hemispheres 5417.2
2329 Male, age 80, right hemisphere 4189.6
1875 Female, age 85, both hemispheres 3650.8
2561 Female, age 91, both hemispheres 3482.5
Superior vestibular nucleus
nTPM: 12344.8
2061 Male, age 76, both hemispheres 14733.3
2383 Male, age 74, both hemispheres 12430.0
2015 Male, age 80, both hemispheres 9871.1
Ventral medullary reticular nucleus
nTPM: 11031.6
2372 Male, age 61, both hemispheres 14065.3
2060 Male, age 76, both hemispheres 7997.9
Ventral periolivary nuclei
nTPM: 4897.7
2130 Female, age 85, both hemispheres 6634.8
2165 Male, age 80, both hemispheres 5088.7
2023 Male, age 76, both hemispheres 4921.2
2794 Female, age 91, left hemisphere 2946.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 12426.8
2302 Female, age 91, both hemispheres 14701.9
2180 Male, age 61, both hemispheres 13219.3
2118 Male, age 80, both hemispheres 12189.4
2741 Female, age 85, both hemispheres 12070.6
1986 Male, age 76, both hemispheres 9952.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 5967.1
2359 Male, age 61, both hemispheres 7800.3
2840 Female, age 85, both hemispheres 6375.5
1959 Male, age 76, both hemispheres 6030.5
2161 Male, age 80, both hemispheres 5939.2
2449 Male, age 74, both hemispheres 5169.5
2456 Female, age 91, both hemispheres 4487.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 9632.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 6916.0
FF:10165-103B3 76 years, female 6992.8
FF:10182-103D2 60 years, female 6839.1
Medulla oblongata
Scaled Tags Per Million: 9632.9
FF:10038-101F2 18-64 years, mixed 13997.8
FF:10155-103A2 76 years, female 10200.1
FF:10174-103C3 60 years, female 4700.8
Pons
Scaled Tags Per Million: 3588.3
FF:10033-101E6 18-54 years, mixed 3588.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 6658.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 6658.4
Samples: 4

Max nTPM: 8132.5
Min nTPM: 5304.7
Sample A Female 5340.6
Sample B Female 5304.7
Sample C Male 7855.9
Sample D Male 8132.5
Pons
nTPM: 4528.6
Samples: 4

Max nTPM: 5503.4
Min nTPM: 4095.7
Sample A Female 4376.6
Sample B Female 4095.7
Sample C Male 4138.8
Sample D Male 5503.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 597.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 597.9
Samples: 4

Max nTPM: 652.1
Min nTPM: 525.0
Sample A Male 631.5
Sample B Male 525.0
Sample C Female 583.0
Sample D Female 652.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.2
1358 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 6.4
1357 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 4.9
79591671 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 4.0
79913385 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 1.2
Pons
Expression energy: 4.5
1358 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 6.3
1357 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 5.2
79591671 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 2.8
79913385 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 2.5

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