We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL27
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL27
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:291.4 nTPM
FANTOM5:53.9 Scaled Tags Per Million
Pig:431.0 nTPM
Allen mouse:0.0 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

291.4
Sample id Sample description nTPM
Area postrema
nTPM: 230.7
2306 Male, age 80, both hemispheres 285.4
2799 Male, age 61, both hemispheres 248.0
2054 Male, age 76, both hemispheres 158.7
Dorsal medullary reticular nucleus
nTPM: 215.2
2040 Female, age 85, both hemispheres 263.7
2373 Male, age 61, both hemispheres 221.6
2088 Male, age 76, both hemispheres 160.2
Dorsal motor vagal complex
nTPM: 241.8
2797 Male, age 61, both hemispheres 318.8
2813 Female, age 72, unknown 276.6
2643 Male, age 74, both hemispheres 273.2
2807 Female, age 85, both hemispheres 249.0
2133 Female, age 91, both hemispheres 241.8
2000 Male, age 74, unknown 209.8
2844 Male, age 55, unknown 190.3
2185 Male, age 76, both hemispheres 175.1
Gigantocellular reticular nuclei, medullary
nTPM: 214.1
2314 Male, age 61, both hemispheres 278.5
1876 Female, age 85, both hemispheres 236.8
2310 Male, age 80, both hemispheres 225.1
2022 Male, age 76, right hemisphere 217.9
2387 Female, age 91, both hemispheres 165.8
2462 Male, age 74, both hemispheres 160.8
Gigantocellular reticular nuclei, pars
nTPM: 210.4
2084 Female, age 85, both hemispheres 229.2
2336 Male, age 61, both hemispheres 223.2
2168 Male, age 76, both hemispheres 209.6
2706 Male, age 80, both hemispheres 198.9
2330 Male, age 80, both hemispheres 190.9
Inferior olive
nTPM: 245.1
2178 Male, age 61, both hemispheres 284.3
2628 Female, age 91, both hemispheres 270.1
2563 Male, age 74, both hemispheres 245.0
2085 Female, age 85, both hemispheres 238.3
2379 Male, age 80, both hemispheres 187.8
Lateral medullary reticular nucleus
nTPM: 243.3
2190 Female, age 85, both hemispheres 283.4
2852 Male, age 80, both hemispheres 261.5
2374 Male, age 61, both hemispheres 257.8
2804 Female, age 91, both hemispheres 239.6
2305 Male, age 74, both hemispheres 213.3
2044 Male, age 76, both hemispheres 204.2
Medial olivary nucleus
nTPM: 274.3
2851 Male, age 80, both hemispheres 300.0
1943 Male, age 61, both hemispheres 290.3
2138 Female, age 91, both hemispheres 254.4
1962 Male, age 76, both hemispheres 252.4
Medial vestibular nucleus
nTPM: 237.1
2803 Female, age 91, both hemispheres 287.9
2624 Male, age 61, both hemispheres 263.5
2801 Male, age 74, both hemispheres 231.8
2743 Female, age 85, both hemispheres 226.1
2093 Male, age 80, both hemispheres 211.1
2134 Male, age 76, both hemispheres 202.1
Motor hypoglossal nucleus
nTPM: 221.0
2132 Female, age 85, both hemispheres 253.9
2182 Male, age 80, both hemispheres 244.3
2125 Female, age 91, both hemispheres 228.8
2461 Male, age 61, both hemispheres 221.1
2277 Male, age 76, both hemispheres 157.0
Nucleus ambiguus
nTPM: 183.5
2071 Male, age 76, both hemispheres 246.2
2096 Female, age 85, both hemispheres 120.8
Nucleus cuneatus
nTPM: 195.3
2808 Female, age 85, both hemispheres 261.3
2562 Male, age 61, both hemispheres 216.2
2381 Male, age 80, both hemispheres 209.1
2805 Female, age 91, both hemispheres 206.9
2564 Male, age 74, both hemispheres 201.3
2380 Male, age 80, both hemispheres 190.9
2376 Male, age 61, both hemispheres 169.9
2131 Male, age 76, both hemispheres 164.1
2100 Male, age 76, both hemispheres 137.9
Nucleus gracilis
nTPM: 250.7
2627 Male, age 74, both hemispheres 267.8
2382 Male, age 80, both hemispheres 254.6
2299 Female, age 85, both hemispheres 229.7
Nucleus raphe obscurus
nTPM: 254.7
2845 Female, age 85, midline 272.7
2800 Male, age 61, midline 272.0
2142 Male, age 76, midline 219.3
Nucleus raphe pallidus
nTPM: 291.4
1924 Male, age 61, midline 358.7
2183 Male, age 80, midline 282.5
2145 Male, age 76, midline 232.8
Nucleus tractus solitarii
nTPM: 205.1
2191 Female, age 85, both hemispheres 265.0
2144 Female, age 91, right hemisphere 211.7
2307 Male, age 80, both hemispheres 171.9
2656 Male, age 76, both hemispheres 171.8
Parvicellular reticular nuclei
nTPM: 216.4
2095 Male, age 76, both hemispheres 250.4
2119 Male, age 80, both hemispheres 235.1
2558 Male, age 74, both hemispheres 163.6
Parvicellular reticular nuclei, medullary
nTPM: 229.7
2189 Female, age 91, both hemispheres 246.9
2091 Female, age 85, both hemispheres 231.3
2181 Male, age 80, left hemisphere 211.0
Peritrigeminal nucleus
nTPM: 257.3
2067 Female, age 85, both hemispheres 292.9
2136 Male, age 76, both hemispheres 260.5
2179 Male, age 61, both hemispheres 218.6
Prepositus hypoglossal nucleus
nTPM: 226.4
2086 Male, age 80, both hemispheres 227.0
2855 Female, age 85, right hemisphere 225.9
Spinal trigeminal nucleus, caudal
nTPM: 220.8
2390 Female, age 91, both hemispheres 238.5
2308 Male, age 80, both hemispheres 235.1
2312 Male, age 61, both hemispheres 228.3
2642 Male, age 74, both hemispheres 225.9
2447 Male, age 76, both hemispheres 176.4
Spinal trigeminal nucleus, interpolar
nTPM: 223.6
2066 Male, age 76, right hemisphere 245.1
2625 Male, age 61, both hemispheres 228.2
2033 Male, age 80, both hemispheres 223.7
2386 Female, age 85, both hemispheres 211.0
2389 Female, age 91, both hemispheres 209.9
Spinal vestibular nucleus
nTPM: 244.9
2796 Male, age 61, both hemispheres 269.5
2806 Female, age 85, both hemispheres 267.1
2780 Male, age 80, both hemispheres 247.8
2186 Female, age 91, both hemispheres 244.3
2748 Male, age 76, both hemispheres 238.7
2384 Male, age 74, both hemispheres 201.9
Superior vestibular nucleus
nTPM: 243.1
2383 Male, age 74, both hemispheres 291.9
2015 Male, age 80, both hemispheres 245.9
2061 Male, age 76, both hemispheres 191.4
Ventral medullary reticular nucleus
nTPM: 194.5
2372 Male, age 61, both hemispheres 207.0
2060 Male, age 76, both hemispheres 182.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 254.4
2118 Male, age 80, both hemispheres 272.1
1986 Male, age 76, both hemispheres 260.0
2741 Female, age 85, both hemispheres 256.9
2302 Female, age 91, both hemispheres 246.1
2180 Male, age 61, both hemispheres 237.0

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

53.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 53.9
FF:10174-103C3 60 years, female 91.2
FF:10155-103A2 76 years, female 35.7
FF:10038-101F2 18-64 years, mixed 34.7

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

431.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 431.0
Samples: 4

Max nTPM: 470.4
Min nTPM: 373.0
Sample A Female 470.4
Sample B Female 373.0
Sample C Male 421.3
Sample D Male 459.4

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.0
69261404 Antisense, RP_050118_01_D07, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org