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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:273.0 nTPM
GTEx:273.0 nTPM
FANTOM5:165.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA061298Antibody CAB005042
Squamous epithelial cells Not detectedMedium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

273.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 273.0
Samples: 156

Max nTPM: 724.3
Min nTPM: 95.3
Std nTPM: 131.4
Median nTPM: 241.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 724.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 670.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 616.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 580.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 567.3
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 559.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 505.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 488.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 488.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 484.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 482.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 473.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 470.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 457.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 450.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 448.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 447.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 433.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 430.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 427.3
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 424.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 424.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 424.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 422.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 421.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 418.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 418.0
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 415.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 407.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 406.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 403.9
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 401.4
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 400.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 397.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 389.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 388.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 374.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 367.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 367.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 364.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 362.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 359.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 352.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 349.7
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 345.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 343.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 343.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 342.3
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 333.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 332.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 330.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 322.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 322.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 316.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 316.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 312.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 311.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 304.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 301.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 300.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 280.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 279.4
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 278.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 278.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 276.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 274.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 273.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 269.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 269.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 265.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 264.3
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 260.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 255.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 252.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 247.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 246.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 244.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 243.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 238.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 238.2
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 233.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 233.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 231.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 231.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 229.6
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 228.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 227.6
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 225.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 222.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 221.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 216.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 214.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 214.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 212.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 211.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 209.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 207.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 201.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 198.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 197.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 190.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 189.3
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 188.1
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 187.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 183.2
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 182.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 178.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 177.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 177.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 176.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 174.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 173.8
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 173.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 173.0
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 169.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 168.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 166.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 164.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 162.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 161.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 161.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 160.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 157.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 155.5
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 152.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 150.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 144.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 143.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 142.9
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 141.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 141.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 141.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 140.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 139.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 139.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 135.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 128.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 124.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 123.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 121.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 121.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 118.5
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 117.2
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 115.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 115.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 114.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 114.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 112.9
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 111.4
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 111.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 109.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 108.9
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 108.7
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 103.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 101.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 95.3
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

165.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 165.2
FF:10204-103F6 68 years, female 165.2

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