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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:232.4 nTPM
HPA Brain:623.1 nTPM
GTEx:232.4 nTPM
FANTOM5:378.3 Scaled Tags Per Million
Pig:137.8 nTPM
Mouse:87.5 nTPM
Allen mouse:7.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA048531Antibody HPA066469
Glial cells LowHigh
Neuronal cells Not detectedNot detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

623.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 410.8
2289 Male, age 61, right hemisphere 539.2
2481 Female, age 94, left hemisphere 453.6
2290 Female, age 72, unknown 442.2
1857 Female, age 85, left hemisphere 415.3
2288 Male, age 75, left hemisphere 395.8
1781 Male, age 74, unknown 376.0
2846 Female, age 79, unknown 337.5
1854 Male, age 80, left hemisphere 326.5
Globus pallidus, externus
nTPM: 623.1
2646 Male, age 61, right hemisphere 988.9
2567 Female, age 72, unknown 678.2
2772 Female, age 79, unknown 568.2
1996 Male, age 80, right hemisphere 535.2
2395 Male, age 75, both hemispheres 345.0
Globus pallidus, internus
nTPM: 506.4
2566 Female, age 72, unknown 600.6
1818 Male, age 74, unknown 565.1
2111 Female, age 85, right hemisphere 533.0
2483 Female, age 94, right hemisphere 513.2
2037 Male, age 80, right hemisphere 500.0
2287 Male, age 75, right hemisphere 424.5
2778 Female, age 91, both hemispheres 408.8
Nucleus accumbens
nTPM: 399.0
2698 Female, age 72, unknown 472.5
1806 Female, age 85, left hemisphere 449.9
2732 Male, age 80, right hemisphere 444.3
1783 Male, age 74, unknown 429.7
2286 Male, age 75, left hemisphere 376.9
2824 Male, age 61, right hemisphere 366.2
2391 Female, age 94, left hemisphere 359.8
1856 Female, age 91, right hemisphere 292.7
Nucleus basalis of Meynert
nTPM: 560.9
2569 Male, age 61, both hemispheres 1086.4
2484 Female, age 94, left hemisphere 430.0
2821 Male, age 75, both hemispheres 399.0
2393 Male, age 80, right hemisphere 327.9
Nucleus of the diagonal band
nTPM: 441.3
1979 Male, age 74, unknown 578.6
1812 Female, age 91, both hemispheres 481.8
2195 Female, age 85, both hemispheres 458.1
2775 Male, age 80, right hemisphere 378.3
2029 Male, age 61, right hemisphere 309.7
Putamen
nTPM: 383.8
2647 Male, age 75, left hemisphere 629.6
2489 Female, age 72, unknown 454.4
1829 Male, age 74, unknown 419.5
2482 Female, age 94, left hemisphere 380.1
2466 Female, age 79, unknown 291.3
1937 Female, age 91, right hemisphere 273.1
1838 Male, age 80, right hemisphere 238.8
Septal nuclei
nTPM: 514.1
2199 Male, age 80, right hemisphere 712.3
2059 Female, age 85, both hemispheres 601.5
2394 Male, age 61, left hemisphere 575.4
2629 Female, age 94, right hemisphere 475.0
2009 Female, age 91, both hemispheres 455.8
1960 Male, age 74, unknown 437.9
2031 Female, age 72, unknown 340.8
Stria terminalis, bed nucleus
nTPM: 410.4
2201 Male, age 74, unknown 589.1
1974 Female, age 91, both hemispheres 363.6
2486 Female, age 94, both hemispheres 278.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

232.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 232.4
Samples: 246

Max nTPM: 498.7
Min nTPM: 55.9
Std nTPM: 88.8
Median nTPM: 220.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 498.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 497.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 497.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 469.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 468.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 460.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 438.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 431.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 430.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 401.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 397.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 390.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 388.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 386.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 383.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 379.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 378.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 375.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 370.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 366.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 361.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 356.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 353.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 353.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 350.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 349.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 349.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 343.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 342.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 337.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 331.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 331.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 329.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 326.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 320.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 320.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 319.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 318.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 317.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 316.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 315.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 309.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 308.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 307.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 306.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 303.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 301.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 301.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 301.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 299.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 299.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 299.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 298.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 295.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 294.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 293.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 293.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 292.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 292.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 291.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 288.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 288.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 287.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 287.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 286.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 286.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 282.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 282.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 281.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 281.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 281.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 279.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 279.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 278.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 278.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 277.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 273.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 273.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 271.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 270.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 268.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 265.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 264.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 264.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 263.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 262.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 260.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 259.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 258.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 256.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 255.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 253.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 253.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 252.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 251.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 251.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 251.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 249.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 249.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 248.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 248.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 247.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 247.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 245.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 245.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 244.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 239.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 236.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 235.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 234.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 234.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 233.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 232.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 232.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 231.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 230.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 229.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 225.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 224.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 224.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 221.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 220.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 220.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 220.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 219.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 217.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 217.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 216.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 215.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 215.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 214.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 212.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 212.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 211.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 210.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 210.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 209.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 208.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 208.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 207.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 206.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 206.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 204.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 202.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 201.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 201.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 198.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 198.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 198.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 198.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 197.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 196.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 195.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 194.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 194.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 193.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 193.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 190.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 190.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 189.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 189.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 189.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 187.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 186.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 185.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 185.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 184.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 183.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 183.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 182.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 181.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 181.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 181.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 179.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 178.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 177.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 176.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 173.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 173.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 172.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 171.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 171.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 170.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 168.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 167.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 166.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 166.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 165.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 163.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 163.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 161.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 161.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 160.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 159.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 159.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 158.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 158.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 157.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 156.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 155.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 153.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 152.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 151.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 149.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 147.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 145.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 145.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 144.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 141.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 138.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 138.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 138.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 136.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 134.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 134.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 134.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 130.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 127.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 127.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 125.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 123.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 122.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 121.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 121.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 121.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 119.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 115.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 115.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 112.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 112.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 106.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 103.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 103.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 102.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 100.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 98.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 97.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 96.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 90.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 83.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 81.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 81.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 77.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 74.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 55.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 219.5
Samples: 246

Max nTPM: 477.6
Min nTPM: 49.9
Std nTPM: 78.2
Median nTPM: 209.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 477.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 422.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 416.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 410.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 408.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 399.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 398.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 397.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 386.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 382.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 381.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 366.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 361.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 357.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 355.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 354.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 352.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 346.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 341.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 336.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 329.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 329.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 328.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 328.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 327.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 325.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 325.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 320.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 318.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 306.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 306.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 306.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 306.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 304.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 304.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 302.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 302.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 300.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 299.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 298.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 298.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 297.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 296.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 295.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 295.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 294.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 292.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 291.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 290.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 289.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 288.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 282.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 281.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 279.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 279.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 278.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 276.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 275.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 275.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 274.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 272.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 270.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 270.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 270.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 269.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 269.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 268.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 264.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 264.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 263.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 262.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 260.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 257.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 255.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 255.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 254.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 253.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 251.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 251.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 250.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 250.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 247.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 247.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 246.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 245.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 244.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 243.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 243.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 243.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 241.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 240.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 239.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 239.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 237.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 237.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 236.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 234.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 231.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 229.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 229.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 228.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 227.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 225.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 225.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 225.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 224.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 223.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 222.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 221.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 221.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 221.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 219.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 218.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 217.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 217.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 216.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 216.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 215.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 215.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 215.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 215.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 213.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 209.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 209.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 208.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 207.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 205.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 204.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 204.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 204.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 203.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 203.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 203.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 202.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 202.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 200.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 200.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 198.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 198.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 196.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 196.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 194.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 194.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 193.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 193.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 193.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 192.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 191.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 187.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 183.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 183.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 183.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 182.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 182.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 181.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 179.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 178.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 178.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 176.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 176.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 176.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 175.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 174.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 174.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 172.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 171.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 171.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 170.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 170.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 169.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 168.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 167.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 167.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 165.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 165.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 165.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 163.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 163.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 163.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 162.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 162.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 162.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 161.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 161.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 161.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 160.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 159.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 159.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 158.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 156.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 155.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 155.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 154.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 151.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 150.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 150.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 149.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 148.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 148.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 147.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 146.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 145.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 144.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 144.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 143.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 143.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 143.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 142.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 142.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 141.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 139.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 138.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 137.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 137.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 137.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 133.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 133.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 133.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 132.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 132.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 129.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 129.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 129.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 128.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 127.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 127.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 124.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 124.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 124.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 120.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 120.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 119.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 113.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 107.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 106.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 105.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 104.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 103.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 98.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 93.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 87.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 84.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 83.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 73.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 58.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 49.9
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Brain - Putamen (basal ganglia)
Average nTPM: 213.7
Samples: 205

Max nTPM: 471.0
Min nTPM: 48.2
Std nTPM: 82.6
Median nTPM: 204.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 471.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 456.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 449.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 422.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 417.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 415.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 406.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 391.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 382.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 378.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 372.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 366.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 359.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 358.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 353.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 343.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 332.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 330.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 330.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 329.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 327.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 324.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 321.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 311.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 305.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 302.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 300.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 300.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 298.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 296.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 296.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 294.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 284.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 282.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 281.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 280.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 280.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 275.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 275.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 272.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 271.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 271.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 269.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 267.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 266.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 265.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 264.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 263.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 263.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 263.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 259.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 256.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 255.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 255.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 254.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 253.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 252.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 252.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 251.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 251.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 251.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 250.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 250.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 246.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 245.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 243.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 242.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 241.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 240.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 239.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 237.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 237.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 237.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 236.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 235.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 235.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 234.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 233.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 230.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 230.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 230.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 230.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 228.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 227.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 226.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 226.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 223.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 222.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 221.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 220.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 220.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 220.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 219.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 217.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 215.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 214.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 212.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 212.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 212.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 209.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 208.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 206.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 204.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 203.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 200.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 196.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 196.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 195.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 194.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 193.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 193.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 193.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 193.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 192.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 191.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 191.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 191.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 187.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 187.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 187.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 186.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 186.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 186.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 185.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 183.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 183.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 181.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 181.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 179.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 179.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 178.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 177.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 175.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 175.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 174.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 173.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 173.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 172.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 170.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 170.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 170.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 169.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 169.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 169.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 168.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 167.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 166.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 164.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 164.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 164.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 164.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 164.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 160.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 160.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 159.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 157.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 155.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 154.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 154.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 153.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 153.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 152.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 149.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 149.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 148.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 146.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 141.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 141.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 140.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 138.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 135.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 132.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 132.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 131.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 129.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 128.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 127.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 126.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 125.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 125.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 123.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 122.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 121.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 115.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 115.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 112.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 109.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 107.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 106.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 104.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 103.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 100.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 98.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 93.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 88.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 83.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 83.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 82.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 77.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 74.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 67.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 56.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 52.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 48.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 48.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

378.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 378.3
FF:10164-103B2 76 years, female 378.3
Nucleus accumbens
Scaled Tags Per Million: 352.7
FF:10037-101F1 23-56 years, mixed 352.7
Putamen
Scaled Tags Per Million: 364.3
FF:10176-103C5 60 years, female 364.3
Globus pallidus
Scaled Tags Per Million: 336.9
FF:10161-103A8 76 years, female 494.9
FF:10175-103C4 60 years, female 178.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.8
Pig sample Sample description nTPM
Caudate
nTPM: 133.4
Samples: 4

Max nTPM: 161.1
Min nTPM: 110.7
Sample A Female 110.7
Sample B Female 136.7
Sample C Male 161.1
Sample D Male 125.1
Putamen
nTPM: 132.5
Samples: 4

Max nTPM: 145.4
Min nTPM: 110.7
Sample A Female 140.3
Sample B Female 110.7
Sample C Male 133.4
Sample D Male 145.4
Septum
nTPM: 131.4
Samples: 4

Max nTPM: 145.2
Min nTPM: 120.5
Sample A Female 120.5
Sample B Female 124.3
Sample C Male 135.6
Sample D Male 145.2
Ventral pallidum
nTPM: 137.8
Samples: 4

Max nTPM: 184.2
Min nTPM: 110.3
Sample A Female 110.3
Sample B Female 126.8
Sample C Male 184.2
Sample D Male 129.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 58.3
Samples: 4

Max nTPM: 68.6
Min nTPM: 50.9
Sample A Male 51.6
Sample B Male 68.6
Sample C Female 50.9
Sample D Female 62.1
Septum
nTPM: 87.5
Samples: 4

Max nTPM: 96.8
Min nTPM: 80.7
Sample A Male 96.8
Sample B Male 82.7
Sample C Female 80.7
Sample D Female 89.8
Ventral forebrain
nTPM: 78.0
Samples: 4

Max nTPM: 83.7
Min nTPM: 73.2
Sample A Male 81.2
Sample B Male 83.7
Sample C Female 74.0
Sample D Female 73.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.4
69816494 Antisense, RP_050510_01_C01, Mouse strain C57BL/6J (56 days, male) 4.8
77332715 Antisense, RP_070116_02_B11, Mouse strain C57BL/6J (56 days, male) 4.0
Pallidum
Expression energy: 7.1
69816494 Antisense, RP_050510_01_C01, Mouse strain C57BL/6J (56 days, male) 7.1
77332715 Antisense, RP_070116_02_B11, Mouse strain C57BL/6J (56 days, male) 7.0

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