HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:261.4 nTPM
HPA Brain:618.8 nTPM
GTEx:261.4 nTPM
FANTOM5:535.7 Scaled Tags Per Million
Pig:171.9 nTPM
Mouse:84.1 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048531Antibody HPA066469
Glial cells MediumLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 618.8
Sample id Sample description nTPM
Hippocampus
nTPM: 618.8
2529 Female, age 94, left hemisphere 795.5
2148 Female, age 91, left hemisphere 620.7
2621 Female, age 67, right hemisphere 598.7
1911 Female, age 85, right hemisphere 584.3
1855 Male, age 76, left hemisphere 580.7
1898 Male, age 80, left hemisphere 533.2
Dentate gyrus
nTPM: 582.9
2530 Female, age 94, left hemisphere 765.9
2010 Male, age 76, both hemispheres 610.3
2528 Male, age 74, both hemispheres 584.2
2531 Female, age 67, both hemispheres 579.6
2246 Female, age 85, both hemispheres 574.5
1927 Female, age 91, both hemispheres 383.1
Entorhinal gyrus
nTPM: 497.0
2117 Female, age 91, right hemisphere 605.9
2686 Male, age 75, right hemisphere 590.1
1787 Male, age 76, left hemisphere 519.5
1938 Female, age 85, left hemisphere 449.0
2764 Male, age 80, right hemisphere 441.6
2613 Female, age 94, left hemisphere 375.8
Hippocampus, CA1
nTPM: 485.4
2527 Male, age 74, both hemispheres 608.4
1873 Female, age 85, both hemispheres 567.9
2082 Female, age 91, right hemisphere 517.0
2045 Male, age 76, both hemispheres 439.6
2749 Male, age 80, left hemisphere 294.3
Hippocampus, CA2
nTPM: 490.6
2437 Female, age 94, left hemisphere 583.0
1940 Female, age 85, left hemisphere 578.5
2113 Female, age 91, right hemisphere 548.9
2249 Male, age 74, both hemispheres 455.1
1963 Male, age 80, left hemisphere 452.1
1892 Male, age 76, both hemispheres 325.9
Hippocampus, CA3
nTPM: 484.1
2861 Female, age 67, both hemispheres 839.7
2620 Female, age 94, left hemisphere 545.9
1891 Female, age 85, both hemispheres 520.5
2436 Male, age 74, both hemispheres 377.1
1867 Male, age 76, both hemispheres 346.3
2137 Male, age 80, left hemisphere 275.2
Parahippocampal cortex
nTPM: 448.7
2692 Male, age 74, both hemispheres 637.3
2622 Female, age 67, right hemisphere 535.9
2245 Female, age 91, both hemispheres 508.5
2018 Male, age 76, both hemispheres 481.7
1933 Female, age 85, both hemispheres 427.8
2532 Female, age 72, left hemisphere 419.2
1990 Female, age 91, right hemisphere 396.2
2250 Female, age 67, right hemisphere 385.5
1850 Male, age 80, both hemispheres 359.2
2693 Female, age 94, both hemispheres 335.4
Perirhinal gyrus
nTPM: 354.9
1847 Female, age 91, left hemisphere 398.2
1794 Male, age 80, right hemisphere 366.6
2521 Female, age 94, right hemisphere 344.8
2848 Male, age 76, right hemisphere 344.7
1841 Female, age 85, right hemisphere 320.2
Subiculum
nTPM: 548.9
2619 Male, age 74, both hemispheres 679.7
2729 Female, age 91, right hemisphere 615.7
2438 Female, age 94, left hemisphere 589.9
2042 Male, age 76, both hemispheres 569.7
1901 Male, age 80, both hemispheres 428.0
1977 Female, age 85, both hemispheres 410.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 261.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 261.4
Samples: 197

Max nTPM: 623.2
Min nTPM: 107.9
Std nTPM: 89.6
Median nTPM: 249.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 623.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 590.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 488.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 479.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 451.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 451.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 451.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 439.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 433.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 420.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 420.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 535.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 535.7
FF:10153-102I9 76 years, female 810.8
FF:10169-103B7 60 years, female 260.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 171.9
Pig sample Sample description nTPM
Subiculum
nTPM: 171.9
Samples: 4

Max nTPM: 218.1
Min nTPM: 150.2
Sample A Female 218.1
Sample B Female 150.2
Sample C Male 167.1
Sample D Male 152.3
Dorsal hippocampus
nTPM: 132.6
Samples: 4

Max nTPM: 148.3
Min nTPM: 117.1
Sample A Female 140.9
Sample B Female 117.1
Sample C Male 148.3
Sample D Male 123.9
Entorhinal cortex
nTPM: 154.9
Samples: 4

Max nTPM: 182.7
Min nTPM: 129.3
Sample A Female 165.3
Sample B Female 129.3
Sample C Male 182.7
Sample D Male 142.2
Ventral hippocampus
nTPM: 159.0
Samples: 4

Max nTPM: 224.3
Min nTPM: 128.3
Sample A Female 146.9
Sample B Female 128.3
Sample C Male 224.3
Sample D Male 136.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 84.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 84.1
Samples: 4

Max nTPM: 92.1
Min nTPM: 79.1
Sample A Male 82.2
Sample B Male 79.1
Sample C Female 83.1
Sample D Female 92.1
Hippocampal formation
nTPM: 72.1
Samples: 4

Max nTPM: 83.3
Min nTPM: 58.4
Sample A Male 75.9
Sample B Male 70.8
Sample C Female 58.4
Sample D Female 83.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
77332715 Antisense, RP_070116_02_B11, Mouse strain C57BL/6J (56 days, male) 6.7
69816494 Antisense, RP_050510_01_C01, Mouse strain C57BL/6J (56 days, male) 6.5

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