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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:330.6 nTPM
HPA Brain:646.3 nTPM
GTEx:330.6 nTPM
FANTOM5:929.4 Scaled Tags Per Million
Pig:507.1 nTPM
Mouse:749.0 nTPM
Allen mouse:23.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA015649Antibody HPA015650
Glial cells Not detectedMedium
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

646.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 340.4
2288 Male, age 75, left hemisphere 448.9
1781 Male, age 74, unknown 401.8
2846 Female, age 79, unknown 364.2
2481 Female, age 94, left hemisphere 329.3
1857 Female, age 85, left hemisphere 325.2
2290 Female, age 72, unknown 309.1
1854 Male, age 80, left hemisphere 307.2
2289 Male, age 61, right hemisphere 237.6
Globus pallidus, externus
nTPM: 326.8
2772 Female, age 79, unknown 490.6
2395 Male, age 75, both hemispheres 435.4
1996 Male, age 80, right hemisphere 339.4
2646 Male, age 61, right hemisphere 199.7
2567 Female, age 72, unknown 168.9
Globus pallidus, internus
nTPM: 354.6
2287 Male, age 75, right hemisphere 526.2
2778 Female, age 91, both hemispheres 440.1
1818 Male, age 74, unknown 387.8
2037 Male, age 80, right hemisphere 313.0
2111 Female, age 85, right hemisphere 292.0
2483 Female, age 94, right hemisphere 282.6
2566 Female, age 72, unknown 240.7
Nucleus accumbens
nTPM: 372.2
2286 Male, age 75, left hemisphere 460.5
1856 Female, age 91, right hemisphere 439.6
2698 Female, age 72, unknown 388.8
2391 Female, age 94, left hemisphere 367.3
2824 Male, age 61, right hemisphere 360.4
1783 Male, age 74, unknown 355.3
1806 Female, age 85, left hemisphere 346.8
2732 Male, age 80, right hemisphere 258.9
Nucleus basalis of Meynert
nTPM: 283.6
2821 Male, age 75, both hemispheres 388.3
2393 Male, age 80, right hemisphere 290.3
2484 Female, age 94, left hemisphere 272.8
2569 Male, age 61, both hemispheres 182.8
Nucleus of the diagonal band
nTPM: 646.3
1812 Female, age 91, both hemispheres 781.1
2029 Male, age 61, right hemisphere 742.6
2775 Male, age 80, right hemisphere 735.0
2195 Female, age 85, both hemispheres 631.8
1979 Male, age 74, unknown 341.1
Putamen
nTPM: 304.4
1937 Female, age 91, right hemisphere 380.6
1829 Male, age 74, unknown 356.5
2466 Female, age 79, unknown 344.7
1838 Male, age 80, right hemisphere 330.3
2482 Female, age 94, left hemisphere 312.1
2647 Male, age 75, left hemisphere 238.1
2489 Female, age 72, unknown 168.4
Septal nuclei
nTPM: 545.9
2031 Female, age 72, unknown 819.7
1960 Male, age 74, unknown 710.1
2629 Female, age 94, right hemisphere 664.1
2009 Female, age 91, both hemispheres 612.1
2059 Female, age 85, both hemispheres 413.3
2394 Male, age 61, left hemisphere 342.7
2199 Male, age 80, right hemisphere 259.5
Stria terminalis, bed nucleus
nTPM: 545.2
1974 Female, age 91, both hemispheres 718.6
2486 Female, age 94, both hemispheres 565.9
2201 Male, age 74, unknown 351.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

330.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 293.0
Samples: 246

Max nTPM: 828.9
Min nTPM: 129.8
Std nTPM: 92.0
Median nTPM: 288.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 828.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 608.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 539.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 525.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 502.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 482.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 463.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 456.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 448.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 447.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 440.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 435.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 424.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 424.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 422.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 421.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 417.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 413.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 413.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 408.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 404.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 402.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 400.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 396.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 395.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 393.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 392.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 390.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 389.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 389.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 388.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 387.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 387.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 386.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 384.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 384.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 384.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 383.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 382.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 381.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 379.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 375.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 374.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 374.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 370.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 369.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 368.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 366.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 363.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 363.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 362.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 362.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 360.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 360.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 360.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 357.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 357.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 356.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 355.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 355.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 354.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 354.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 354.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 353.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 352.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 352.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 351.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 350.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 344.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 344.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 343.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 343.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 340.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 339.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 338.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 338.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 337.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 337.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 336.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 336.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 335.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 335.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 332.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 330.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 328.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 327.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 327.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 327.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 326.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 325.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 324.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 322.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 318.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 317.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 316.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 315.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 313.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 312.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 312.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 312.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 311.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 311.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 311.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 306.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 306.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 305.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 304.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 303.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 303.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 302.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 301.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 300.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 300.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 299.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 298.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 297.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 297.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 296.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 293.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 293.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 290.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 290.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 289.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 287.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 287.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 287.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 286.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 286.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 285.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 284.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 283.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 283.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 280.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 280.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 279.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 278.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 278.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 277.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 274.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 274.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 271.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 271.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 270.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 268.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 268.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 267.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 266.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 264.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 263.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 262.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 261.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 260.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 259.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 257.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 257.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 256.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 252.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 251.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 251.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 250.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 250.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 249.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 246.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 245.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 244.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 244.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 244.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 242.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 242.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 239.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 238.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 238.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 235.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 235.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 234.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 233.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 230.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 227.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 225.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 224.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 223.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 223.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 222.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 221.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 221.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 221.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 219.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 218.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 217.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 215.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 213.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 212.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 211.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 210.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 209.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 208.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 208.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 207.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 206.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 203.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 202.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 201.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 199.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 196.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 196.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 196.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 192.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 190.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 189.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 189.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 189.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 189.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 188.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 188.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 186.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 185.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 184.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 183.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 183.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 182.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 181.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 181.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 181.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 181.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 180.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 180.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 176.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 176.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 173.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 170.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 166.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 164.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 163.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 161.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 161.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 161.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 161.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 157.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 157.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 151.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 148.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 147.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 145.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 141.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 140.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 129.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 330.6
Samples: 246

Max nTPM: 556.0
Min nTPM: 99.0
Std nTPM: 96.1
Median nTPM: 342.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 556.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 554.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 553.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 521.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 515.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 506.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 503.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 500.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 489.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 485.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 484.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 482.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 480.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 479.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 470.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 462.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 461.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 461.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 457.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 452.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 450.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 449.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 448.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 448.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 447.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 445.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 443.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 443.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 442.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 441.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 440.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 437.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 437.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 437.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 433.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 430.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 429.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 428.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 428.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 427.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 426.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 425.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 424.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 421.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 418.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 417.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 413.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 411.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 409.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 409.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 409.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 408.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 408.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 407.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 407.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 405.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 405.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 405.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 405.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 404.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 404.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 403.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 403.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 401.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 399.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 398.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 397.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 393.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 392.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 391.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 391.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 387.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 386.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 386.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 383.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 382.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 382.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 382.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 382.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 381.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 380.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 379.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 379.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 379.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 378.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 378.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 377.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 375.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 375.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 373.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 373.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 372.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 371.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 370.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 369.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 368.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 367.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 366.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 366.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 364.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 364.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 363.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 360.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 360.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 358.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 358.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 355.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 355.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 354.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 354.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 353.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 353.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 352.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 352.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 351.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 351.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 350.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 347.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 346.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 343.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 342.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 342.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 342.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 342.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 340.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 340.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 339.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 338.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 337.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 336.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 335.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 334.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 334.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 333.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 330.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 327.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 325.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 324.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 322.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 321.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 321.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 320.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 320.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 318.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 318.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 316.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 313.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 312.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 311.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 310.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 306.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 305.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 304.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 303.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 302.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 301.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 300.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 300.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 299.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 298.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 296.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 296.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 295.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 295.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 294.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 294.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 291.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 291.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 289.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 284.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 282.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 275.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 274.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 274.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 273.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 273.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 270.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 269.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 269.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 267.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 265.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 262.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 261.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 261.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 261.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 259.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 257.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 254.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 250.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 249.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 245.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 243.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 241.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 241.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 241.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 239.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 239.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 238.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 238.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 238.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 237.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 236.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 229.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 227.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 225.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 218.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 217.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 217.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 216.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 212.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 212.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 212.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 211.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 209.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 208.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 205.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 203.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 200.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 199.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 199.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 196.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 192.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 188.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 187.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 183.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 182.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 181.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 176.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 176.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 174.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 170.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 170.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 169.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 166.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 164.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 162.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 159.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 159.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 155.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 150.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 147.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 144.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 123.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 113.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 99.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 99.0
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Brain - Putamen (basal ganglia)
Average nTPM: 283.4
Samples: 205

Max nTPM: 510.2
Min nTPM: 117.7
Std nTPM: 84.0
Median nTPM: 277.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 510.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 469.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 467.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 461.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 448.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 440.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 436.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 436.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 434.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 433.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 429.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 425.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 424.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 420.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 419.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 419.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 416.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 415.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 410.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 406.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 397.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 396.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 395.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 394.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 393.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 393.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 391.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 386.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 385.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 384.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 382.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 381.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 381.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 372.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 371.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 369.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 368.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 368.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 366.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 363.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 362.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 360.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 359.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 358.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 356.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 356.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 353.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 348.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 345.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 344.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 340.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 337.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 336.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 335.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 334.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 333.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 333.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 332.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 332.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 330.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 329.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 325.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 324.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 323.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 320.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 320.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 318.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 317.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 317.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 316.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 315.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 315.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 315.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 314.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 314.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 312.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 312.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 312.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 311.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 311.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 309.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 307.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 306.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 303.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 302.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 299.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 299.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 295.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 294.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 294.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 292.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 291.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 291.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 290.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 289.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 288.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 288.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 287.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 286.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 285.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 282.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 282.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 277.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 277.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 276.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 274.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 273.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 273.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 272.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 271.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 269.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 268.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 267.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 265.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 265.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 264.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 263.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 259.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 259.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 259.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 258.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 258.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 258.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 254.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 253.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 251.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 251.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 250.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 250.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 247.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 247.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 246.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 240.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 240.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 240.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 239.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 237.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 237.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 235.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 234.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 234.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 230.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 229.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 229.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 225.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 224.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 223.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 220.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 219.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 218.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 216.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 215.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 215.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 212.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 211.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 211.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 210.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 206.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 204.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 203.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 203.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 202.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 200.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 200.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 199.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 198.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 197.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 194.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 194.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 193.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 193.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 192.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 192.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 191.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 190.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 188.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 187.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 186.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 184.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 183.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 183.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 181.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 181.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 181.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 180.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 180.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 179.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 173.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 169.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 168.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 165.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 165.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 165.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 162.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 159.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 157.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 157.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 154.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 154.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 149.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 140.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 135.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 133.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 119.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 117.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

929.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 429.6
FF:10164-103B2 76 years, female 429.6
Nucleus accumbens
Scaled Tags Per Million: 929.4
FF:10037-101F1 23-56 years, mixed 929.4
Putamen
Scaled Tags Per Million: 641.9
FF:10176-103C5 60 years, female 641.9
Globus pallidus
Scaled Tags Per Million: 329.6
FF:10161-103A8 76 years, female 376.8
FF:10175-103C4 60 years, female 282.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

507.1
Pig sample Sample description nTPM
Caudate
nTPM: 423.0
Samples: 4

Max nTPM: 487.8
Min nTPM: 382.5
Sample A Female 398.6
Sample B Female 423.1
Sample C Male 487.8
Sample D Male 382.5
Putamen
nTPM: 507.1
Samples: 4

Max nTPM: 701.0
Min nTPM: 402.5
Sample A Female 402.5
Sample B Female 445.8
Sample C Male 701.0
Sample D Male 479.1
Septum
nTPM: 448.2
Samples: 4

Max nTPM: 576.8
Min nTPM: 331.0
Sample A Female 470.8
Sample B Female 414.3
Sample C Male 576.8
Sample D Male 331.0
Ventral pallidum
nTPM: 440.2
Samples: 4

Max nTPM: 548.0
Min nTPM: 392.8
Sample A Female 406.7
Sample B Female 413.1
Sample C Male 548.0
Sample D Male 392.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

749.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 605.9
Samples: 4

Max nTPM: 642.3
Min nTPM: 561.1
Sample A Male 578.5
Sample B Male 561.1
Sample C Female 641.8
Sample D Female 642.3
Septum
nTPM: 749.0
Samples: 4

Max nTPM: 771.5
Min nTPM: 724.0
Sample A Male 741.1
Sample B Male 771.5
Sample C Female 759.3
Sample D Female 724.0
Ventral forebrain
nTPM: 663.0
Samples: 4

Max nTPM: 684.6
Min nTPM: 626.3
Sample A Male 626.3
Sample B Male 663.8
Sample C Female 677.2
Sample D Female 684.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

23.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 23.0
83161 Antisense, RP_040407_01_G06, Mouse strain C57BL/6J (56 days, male) 24.2
70812889 Antisense, RP_050712_02_G12, Mouse strain C57BL/6J (56 days, male) 21.9
Pallidum
Expression energy: 22.4
83161 Antisense, RP_040407_01_G06, Mouse strain C57BL/6J (56 days, male) 22.7
70812889 Antisense, RP_050712_02_G12, Mouse strain C57BL/6J (56 days, male) 22.2

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