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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
666.6
nTPM
FANTOM5:
1462.5
Scaled Tags Per Million
Pig:
609.9
nTPM
Allen mouse:
18.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
666.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 374.1
2188
Female, age 91, both hemispheres
443.1
2301
Female, age 85, both hemispheres
389.5
1984
Male, age 76, both hemispheres
338.3
2090
Male, age 80, both hemispheres
325.3
Dorsal cochlear nucleus nTPM: 349.4
2187
Female, age 91, both hemispheres
447.2
2802
Male, age 74, right hemisphere
362.8
2058
Male, age 76, both hemispheres
327.2
2370
Male, age 61, both hemispheres
314.5
2378
Male, age 80, both hemispheres
295.3
Dorsal tegmental nucleus nTPM: 376.6
2083
Male, age 80, both hemispheres
441.0
2326
Male, age 74, both hemispheres
416.3
1936
Male, age 76, left hemisphere
364.2
2358
Male, age 61, both hemispheres
284.9
Dorsolateral tegmental area nTPM: 383.1
2751
Female, age 85, both hemispheres
484.3
2654
Male, age 80, both hemispheres
457.3
2360
Male, age 74, both hemispheres
422.2
2141
Male, age 76, both hemispheres
346.5
2337
Male, age 61, both hemispheres
205.1
Kolliker-Fuse nucleus nTPM: 449.9
2163
Male, age 80, both hemispheres
530.3
2793
Female, age 91, left hemisphere
481.6
2315
Male, age 76, right hemisphere
337.8
Lateral lemniscal nuclei nTPM: 570.9
2036
Male, age 80, both hemispheres
713.5
2169
Male, age 76, both hemispheres
654.9
2746
Female, age 85, left hemisphere
557.8
2453
Male, age 74, right hemisphere
526.4
2320
Female, age 91, left hemisphere
401.9
Lateral parabrachial nucleus nTPM: 442.7
2139
Female, age 85, right hemisphere
583.8
2013
Male, age 80, both hemispheres
459.3
2790
Male, age 61, both hemispheres
390.5
2792
Male, age 76, both hemispheres
337.3
Lateral vestibular nucleus nTPM: 422.4
2184
Male, age 76, both hemispheres
476.4
2311
Male, age 80, both hemispheres
368.3
Locus coeruleus nTPM: 550.2
2014
Male, age 55, unknown
682.9
2123
Female, age 91, both hemispheres
621.2
2788
Male, age 74, unknown
565.3
2720
Male, age 74, both hemispheres
547.7
2317
Female, age 72, unknown
523.7
1980
Male, age 76, both hemispheres
481.9
2162
Male, age 80, both hemispheres
428.5
Medial parabrachial nucleus nTPM: 435.1
2170
Female, age 91, both hemispheres
523.8
2854
Male, age 80, both hemispheres
516.4
2156
Male, age 61, both hemispheres
387.6
2786
Male, age 76, both hemispheres
382.7
2463
Female, age 85, right hemisphere
365.1
Medial periolivary nuclei nTPM: 558.0
2171
Female, age 85, both hemispheres
721.1
2063
Male, age 76, both hemispheres
697.3
2791
Male, age 74, right hemisphere
659.6
2081
Male, age 80, both hemispheres
367.6
2458
Female, age 91, both hemispheres
344.5
Motor facial nucleus nTPM: 523.5
2062
Male, age 76, both hemispheres
721.1
2365
Male, age 74, right hemisphere
675.0
2697
Female, age 85, both hemispheres
508.7
2327
Male, age 80, both hemispheres
424.2
2126
Male, age 61, both hemispheres
417.3
2795
Female, age 91, both hemispheres
394.9
Motor trigeminal nucleus nTPM: 417.7
2079
Male, age 80, both hemispheres
481.4
2560
Male, age 74, both hemispheres
477.9
2309
Male, age 76, both hemispheres
396.1
2335
Male, age 61, both hemispheres
392.0
2321
Female, age 91, both hemispheres
341.1
Nuclei of the trapezoid body nTPM: 604.5
2159
Male, age 61, both hemispheres
871.3
2735
Female, age 85, both hemispheres
691.4
1983
Male, age 76, both hemispheres
656.5
2166
Male, age 80, both hemispheres
444.7
2368
Female, age 91, both hemispheres
358.7
Nucleus raphe magnus nTPM: 637.9
2160
Male, age 61, both hemispheres
1041.9
2172
Female, age 85, both hemispheres
707.1
2455
Male, age 74, both hemispheres
653.9
2051
Male, age 76, both hemispheres
548.0
2328
Male, age 80, both hemispheres
465.8
2459
Female, age 91, both hemispheres
410.7
Paramedian reticular nucleus nTPM: 559.3
2050
Female, age 85, both hemispheres
719.6
2313
Male, age 61, both hemispheres
559.2
2057
Male, age 80, both hemispheres
539.0
2052
Male, age 76, both hemispheres
419.3
Pedunculopontine tegmental nucleus nTPM: 409.4
1921
Female, age 85, both hemispheres
440.6
2334
Male, age 80, both hemispheres
440.1
2338
Male, age 61, both hemispheres
347.6
Pontine nuclei nTPM: 666.6
2727
Male, age 61, right hemisphere
962.3
1863
Male, age 55, unknown
832.1
2109
Female, age 72, unknown
730.0
2787
Female, age 85, both hemispheres
698.2
2454
Male, age 74, left hemisphere
681.7
1968
Male, age 76, left hemisphere
640.7
2319
Female, age 91, both hemispheres
435.4
2115
Male, age 80, left hemisphere
352.7
Pontine raphe nucleus nTPM: 516.7
2122
Female, age 85, midline
606.2
2853
Male, age 76, midline
427.3
Posteroventral cochlear nucleus nTPM: 391.6
2752
Female, age 85, both hemispheres
507.7
2070
Male, age 76, both hemispheres
410.3
2135
Female, age 91, both hemispheres
379.4
2341
Male, age 80, both hemispheres
361.9
2371
Male, age 61, both hemispheres
298.9
Principal sensory trigeminal nucleus nTPM: 571.9
2158
Male, age 61, both hemispheres
852.5
2008
Male, age 80, left hemisphere
602.3
2367
Female, age 91, left hemisphere
426.5
2324
Male, age 76, both hemispheres
406.3
Reticular pontine nucleus, caudal nTPM: 464.8
2092
Male, age 76, both hemispheres
526.4
2332
Male, age 80, right hemisphere
484.7
2559
Male, age 74, both hemispheres
466.0
2457
Female, age 91, both hemispheres
382.1
Reticular pontine nucleus, oral nTPM: 516.0
2361
Male, age 74, both hemispheres
701.2
2012
Female, age 85, both hemispheres
607.7
1939
Male, age 80, both hemispheres
468.3
2366
Female, age 91, both hemispheres
412.9
2167
Male, age 76, both hemispheres
389.8
Reticulotegmental nucleus nTPM: 435.7
2325
Male, age 76, both hemispheres
521.1
2322
Female, age 91, both hemispheres
420.8
2452
Male, age 74, both hemispheres
402.0
2333
Male, age 80, both hemispheres
398.8
Spinal trigeminal nucleus, oral nTPM: 436.0
2737
Female, age 85, both hemispheres
487.0
2164
Male, age 80, both hemispheres
444.4
1978
Male, age 76, both hemispheres
376.5
Subcoeruleus area nTPM: 447.0
1958
Male, age 80, both hemispheres
542.0
2089
Male, age 76, left hemisphere
478.4
2323
Female, age 91, left hemisphere
471.1
2369
Female, age 85, left hemisphere
444.3
2451
Male, age 74, both hemispheres
299.3
Superior olive nTPM: 556.5
1875
Female, age 85, both hemispheres
756.3
2364
Male, age 74, right hemisphere
668.8
2020
Male, age 76, both hemispheres
547.1
2329
Male, age 80, right hemisphere
431.5
2561
Female, age 91, both hemispheres
379.0
Ventral periolivary nuclei nTPM: 526.1
2130
Female, age 85, both hemispheres
598.1
2165
Male, age 80, both hemispheres
570.7
2023
Male, age 76, both hemispheres
567.9
2794
Female, age 91, left hemisphere
367.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 473.9
2449
Male, age 74, both hemispheres
594.6
1959
Male, age 76, both hemispheres
543.7
2840
Female, age 85, both hemispheres
542.2
2161
Male, age 80, both hemispheres
425.5
2359
Male, age 61, both hemispheres
393.4
2456
Female, age 91, both hemispheres
343.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
609.9
Pig sample
Sample description
nTPM
Pons nTPM: 609.9
Samples: 4
Max nTPM: 729.7
Min nTPM: 486.2
Sample A
Female
729.7
Sample B
Female
486.2
Sample C
Male
601.5
Sample D
Male
622.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
