PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:666.6 nTPM
FANTOM5:1462.5 Scaled Tags Per Million
Pig:609.9 nTPM
Mouse:610.4 nTPM
Allen mouse:18.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 666.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 374.1
2188 Female, age 91, both hemispheres 443.1
2301 Female, age 85, both hemispheres 389.5
1984 Male, age 76, both hemispheres 338.3
2090 Male, age 80, both hemispheres 325.3
Area postrema
nTPM: 240.5
2054 Male, age 76, both hemispheres 310.3
2306 Male, age 80, both hemispheres 229.1
2799 Male, age 61, both hemispheres 182.1
Dorsal cochlear nucleus
nTPM: 349.4
2187 Female, age 91, both hemispheres 447.2
2802 Male, age 74, right hemisphere 362.8
2058 Male, age 76, both hemispheres 327.2
2370 Male, age 61, both hemispheres 314.5
2378 Male, age 80, both hemispheres 295.3
Dorsal medullary reticular nucleus
nTPM: 422.2
2040 Female, age 85, both hemispheres 670.6
2373 Male, age 61, both hemispheres 308.7
2088 Male, age 76, both hemispheres 287.2
Dorsal motor vagal complex
nTPM: 325.5
2133 Female, age 91, both hemispheres 475.5
2000 Male, age 74, unknown 472.9
2844 Male, age 55, unknown 396.5
2813 Female, age 72, unknown 379.9
2185 Male, age 76, both hemispheres 233.3
2643 Male, age 74, both hemispheres 230.6
2797 Male, age 61, both hemispheres 212.4
2807 Female, age 85, both hemispheres 203.0
Dorsal tegmental nucleus
nTPM: 376.6
2083 Male, age 80, both hemispheres 441.0
2326 Male, age 74, both hemispheres 416.3
1936 Male, age 76, left hemisphere 364.2
2358 Male, age 61, both hemispheres 284.9
Dorsolateral tegmental area
nTPM: 383.1
2751 Female, age 85, both hemispheres 484.3
2654 Male, age 80, both hemispheres 457.3
2360 Male, age 74, both hemispheres 422.2
2141 Male, age 76, both hemispheres 346.5
2337 Male, age 61, both hemispheres 205.1
Gigantocellular reticular nuclei, medullary
nTPM: 448.7
2462 Male, age 74, both hemispheres 572.0
1876 Female, age 85, both hemispheres 527.0
2387 Female, age 91, both hemispheres 443.1
2022 Male, age 76, right hemisphere 429.7
2310 Male, age 80, both hemispheres 375.7
2314 Male, age 61, both hemispheres 344.5
Gigantocellular reticular nuclei, pars
nTPM: 448.4
2168 Male, age 76, both hemispheres 640.7
2084 Female, age 85, both hemispheres 490.0
2336 Male, age 61, both hemispheres 435.0
2706 Male, age 80, both hemispheres 352.1
2330 Male, age 80, both hemispheres 324.1
Inferior olive
nTPM: 350.1
2563 Male, age 74, both hemispheres 503.9
2628 Female, age 91, both hemispheres 354.8
2085 Female, age 85, both hemispheres 353.2
2178 Male, age 61, both hemispheres 288.2
2379 Male, age 80, both hemispheres 250.4
Kolliker-Fuse nucleus
nTPM: 449.9
2163 Male, age 80, both hemispheres 530.3
2793 Female, age 91, left hemisphere 481.6
2315 Male, age 76, right hemisphere 337.8
Lateral lemniscal nuclei
nTPM: 570.9
2036 Male, age 80, both hemispheres 713.5
2169 Male, age 76, both hemispheres 654.9
2746 Female, age 85, left hemisphere 557.8
2453 Male, age 74, right hemisphere 526.4
2320 Female, age 91, left hemisphere 401.9
Lateral medullary reticular nucleus
nTPM: 438.0
2305 Male, age 74, both hemispheres 623.3
2044 Male, age 76, both hemispheres 587.4
2804 Female, age 91, both hemispheres 401.9
2190 Female, age 85, both hemispheres 354.4
2852 Male, age 80, both hemispheres 334.2
2374 Male, age 61, both hemispheres 326.9
Lateral parabrachial nucleus
nTPM: 442.7
2139 Female, age 85, right hemisphere 583.8
2013 Male, age 80, both hemispheres 459.3
2790 Male, age 61, both hemispheres 390.5
2792 Male, age 76, both hemispheres 337.3
Lateral vestibular nucleus
nTPM: 422.4
2184 Male, age 76, both hemispheres 476.4
2311 Male, age 80, both hemispheres 368.3
Locus coeruleus
nTPM: 550.2
2014 Male, age 55, unknown 682.9
2123 Female, age 91, both hemispheres 621.2
2788 Male, age 74, unknown 565.3
2720 Male, age 74, both hemispheres 547.7
2317 Female, age 72, unknown 523.7
1980 Male, age 76, both hemispheres 481.9
2162 Male, age 80, both hemispheres 428.5
Medial olivary nucleus
nTPM: 332.4
2138 Female, age 91, both hemispheres 374.0
2851 Male, age 80, both hemispheres 328.5
1962 Male, age 76, both hemispheres 326.7
1943 Male, age 61, both hemispheres 300.3
Medial parabrachial nucleus
nTPM: 435.1
2170 Female, age 91, both hemispheres 523.8
2854 Male, age 80, both hemispheres 516.4
2156 Male, age 61, both hemispheres 387.6
2786 Male, age 76, both hemispheres 382.7
2463 Female, age 85, right hemisphere 365.1
Medial periolivary nuclei
nTPM: 558.0
2171 Female, age 85, both hemispheres 721.1
2063 Male, age 76, both hemispheres 697.3
2791 Male, age 74, right hemisphere 659.6
2081 Male, age 80, both hemispheres 367.6
2458 Female, age 91, both hemispheres 344.5
Medial vestibular nucleus
nTPM: 533.1
2801 Male, age 74, both hemispheres 680.4
2803 Female, age 91, both hemispheres 576.5
2743 Female, age 85, both hemispheres 498.1
2093 Male, age 80, both hemispheres 489.6
2624 Male, age 61, both hemispheres 480.2
2134 Male, age 76, both hemispheres 473.9
Motor facial nucleus
nTPM: 523.5
2062 Male, age 76, both hemispheres 721.1
2365 Male, age 74, right hemisphere 675.0
2697 Female, age 85, both hemispheres 508.7
2327 Male, age 80, both hemispheres 424.2
2126 Male, age 61, both hemispheres 417.3
2795 Female, age 91, both hemispheres 394.9
Motor hypoglossal nucleus
nTPM: 423.0
2125 Female, age 91, both hemispheres 554.1
2132 Female, age 85, both hemispheres 484.1
2461 Male, age 61, both hemispheres 448.1
2182 Male, age 80, both hemispheres 342.7
2277 Male, age 76, both hemispheres 286.3
Motor trigeminal nucleus
nTPM: 417.7
2079 Male, age 80, both hemispheres 481.4
2560 Male, age 74, both hemispheres 477.9
2309 Male, age 76, both hemispheres 396.1
2335 Male, age 61, both hemispheres 392.0
2321 Female, age 91, both hemispheres 341.1
Nuclei of the trapezoid body
nTPM: 604.5
2159 Male, age 61, both hemispheres 871.3
2735 Female, age 85, both hemispheres 691.4
1983 Male, age 76, both hemispheres 656.5
2166 Male, age 80, both hemispheres 444.7
2368 Female, age 91, both hemispheres 358.7
Nucleus ambiguus
nTPM: 338.5
2096 Female, age 85, both hemispheres 362.8
2071 Male, age 76, both hemispheres 314.2
Nucleus cuneatus
nTPM: 332.9
2131 Male, age 76, both hemispheres 453.1
2564 Male, age 74, both hemispheres 422.8
2376 Male, age 61, both hemispheres 377.8
2100 Male, age 76, both hemispheres 345.7
2562 Male, age 61, both hemispheres 322.0
2381 Male, age 80, both hemispheres 313.3
2380 Male, age 80, both hemispheres 288.8
2808 Female, age 85, both hemispheres 268.5
2805 Female, age 91, both hemispheres 203.8
Nucleus gracilis
nTPM: 313.2
2627 Male, age 74, both hemispheres 482.9
2382 Male, age 80, both hemispheres 274.8
2299 Female, age 85, both hemispheres 181.9
Nucleus raphe magnus
nTPM: 637.9
2160 Male, age 61, both hemispheres 1041.9
2172 Female, age 85, both hemispheres 707.1
2455 Male, age 74, both hemispheres 653.9
2051 Male, age 76, both hemispheres 548.0
2328 Male, age 80, both hemispheres 465.8
2459 Female, age 91, both hemispheres 410.7
Nucleus raphe obscurus
nTPM: 387.2
2845 Female, age 85, midline 473.5
2800 Male, age 61, midline 442.0
2142 Male, age 76, midline 246.3
Nucleus raphe pallidus
nTPM: 393.2
2183 Male, age 80, midline 469.6
1924 Male, age 61, midline 439.7
2145 Male, age 76, midline 270.3
Nucleus tractus solitarii
nTPM: 325.6
2144 Female, age 91, right hemisphere 506.2
2656 Male, age 76, both hemispheres 338.6
2191 Female, age 85, both hemispheres 256.7
2307 Male, age 80, both hemispheres 201.0
Paramedian reticular nucleus
nTPM: 559.3
2050 Female, age 85, both hemispheres 719.6
2313 Male, age 61, both hemispheres 559.2
2057 Male, age 80, both hemispheres 539.0
2052 Male, age 76, both hemispheres 419.3
Parvicellular reticular nuclei
nTPM: 461.5
2119 Male, age 80, both hemispheres 476.2
2558 Male, age 74, both hemispheres 457.4
2095 Male, age 76, both hemispheres 450.7
Parvicellular reticular nuclei, medullary
nTPM: 458.6
2189 Female, age 91, both hemispheres 529.4
2091 Female, age 85, both hemispheres 442.6
2181 Male, age 80, left hemisphere 403.8
Pedunculopontine tegmental nucleus
nTPM: 409.4
1921 Female, age 85, both hemispheres 440.6
2334 Male, age 80, both hemispheres 440.1
2338 Male, age 61, both hemispheres 347.6
Peritrigeminal nucleus
nTPM: 474.6
2179 Male, age 61, both hemispheres 535.7
2136 Male, age 76, both hemispheres 468.2
2067 Female, age 85, both hemispheres 419.8
Pontine nuclei
nTPM: 666.6
2727 Male, age 61, right hemisphere 962.3
1863 Male, age 55, unknown 832.1
2109 Female, age 72, unknown 730.0
2787 Female, age 85, both hemispheres 698.2
2454 Male, age 74, left hemisphere 681.7
1968 Male, age 76, left hemisphere 640.7
2319 Female, age 91, both hemispheres 435.4
2115 Male, age 80, left hemisphere 352.7
Pontine raphe nucleus
nTPM: 516.7
2122 Female, age 85, midline 606.2
2853 Male, age 76, midline 427.3
Posteroventral cochlear nucleus
nTPM: 391.6
2752 Female, age 85, both hemispheres 507.7
2070 Male, age 76, both hemispheres 410.3
2135 Female, age 91, both hemispheres 379.4
2341 Male, age 80, both hemispheres 361.9
2371 Male, age 61, both hemispheres 298.9
Prepositus hypoglossal nucleus
nTPM: 441.9
2855 Female, age 85, right hemisphere 549.1
2086 Male, age 80, both hemispheres 334.7
Principal sensory trigeminal nucleus
nTPM: 571.9
2158 Male, age 61, both hemispheres 852.5
2008 Male, age 80, left hemisphere 602.3
2367 Female, age 91, left hemisphere 426.5
2324 Male, age 76, both hemispheres 406.3
Reticular pontine nucleus, caudal
nTPM: 464.8
2092 Male, age 76, both hemispheres 526.4
2332 Male, age 80, right hemisphere 484.7
2559 Male, age 74, both hemispheres 466.0
2457 Female, age 91, both hemispheres 382.1
Reticular pontine nucleus, oral
nTPM: 516.0
2361 Male, age 74, both hemispheres 701.2
2012 Female, age 85, both hemispheres 607.7
1939 Male, age 80, both hemispheres 468.3
2366 Female, age 91, both hemispheres 412.9
2167 Male, age 76, both hemispheres 389.8
Reticulotegmental nucleus
nTPM: 435.7
2325 Male, age 76, both hemispheres 521.1
2322 Female, age 91, both hemispheres 420.8
2452 Male, age 74, both hemispheres 402.0
2333 Male, age 80, both hemispheres 398.8
Spinal trigeminal nucleus, caudal
nTPM: 425.4
2390 Female, age 91, both hemispheres 661.8
2447 Male, age 76, both hemispheres 449.7
2642 Male, age 74, both hemispheres 349.5
2312 Male, age 61, both hemispheres 344.5
2308 Male, age 80, both hemispheres 321.2
Spinal trigeminal nucleus, interpolar
nTPM: 571.7
2625 Male, age 61, both hemispheres 804.6
2066 Male, age 76, right hemisphere 624.0
2033 Male, age 80, both hemispheres 495.2
2389 Female, age 91, both hemispheres 485.2
2386 Female, age 85, both hemispheres 449.7
Spinal trigeminal nucleus, oral
nTPM: 436.0
2737 Female, age 85, both hemispheres 487.0
2164 Male, age 80, both hemispheres 444.4
1978 Male, age 76, both hemispheres 376.5
Spinal vestibular nucleus
nTPM: 445.8
2186 Female, age 91, both hemispheres 536.6
2806 Female, age 85, both hemispheres 492.4
2780 Male, age 80, both hemispheres 469.6
2796 Male, age 61, both hemispheres 427.6
2748 Male, age 76, both hemispheres 398.8
2384 Male, age 74, both hemispheres 350.1
Subcoeruleus area
nTPM: 447.0
1958 Male, age 80, both hemispheres 542.0
2089 Male, age 76, left hemisphere 478.4
2323 Female, age 91, left hemisphere 471.1
2369 Female, age 85, left hemisphere 444.3
2451 Male, age 74, both hemispheres 299.3
Superior olive
nTPM: 556.5
1875 Female, age 85, both hemispheres 756.3
2364 Male, age 74, right hemisphere 668.8
2020 Male, age 76, both hemispheres 547.1
2329 Male, age 80, right hemisphere 431.5
2561 Female, age 91, both hemispheres 379.0
Superior vestibular nucleus
nTPM: 448.7
2383 Male, age 74, both hemispheres 538.4
2015 Male, age 80, both hemispheres 457.9
2061 Male, age 76, both hemispheres 349.8
Ventral medullary reticular nucleus
nTPM: 349.3
2060 Male, age 76, both hemispheres 373.1
2372 Male, age 61, both hemispheres 325.6
Ventral periolivary nuclei
nTPM: 526.1
2130 Female, age 85, both hemispheres 598.1
2165 Male, age 80, both hemispheres 570.7
2023 Male, age 76, both hemispheres 567.9
2794 Female, age 91, left hemisphere 367.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 418.5
1986 Male, age 76, both hemispheres 500.6
2741 Female, age 85, both hemispheres 493.8
2180 Male, age 61, both hemispheres 425.1
2302 Female, age 91, both hemispheres 362.7
2118 Male, age 80, both hemispheres 310.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 473.9
2449 Male, age 74, both hemispheres 594.6
1959 Male, age 76, both hemispheres 543.7
2840 Female, age 85, both hemispheres 542.2
2161 Male, age 80, both hemispheres 425.5
2359 Male, age 61, both hemispheres 393.4
2456 Female, age 91, both hemispheres 343.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1462.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 529.1
FF:10182-103D2 60 years, female 534.0
FF:10165-103B3 76 years, female 524.3
Medulla oblongata
Scaled Tags Per Million: 490.3
FF:10038-101F2 18-64 years, mixed 712.9
FF:10155-103A2 76 years, female 469.8
FF:10174-103C3 60 years, female 288.1
Pons
Scaled Tags Per Million: 1462.5
FF:10033-101E6 18-54 years, mixed 1462.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 609.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 494.2
Samples: 4

Max nTPM: 598.7
Min nTPM: 391.3
Sample A Female 598.7
Sample B Female 485.2
Sample C Male 501.6
Sample D Male 391.3
Pons
nTPM: 609.9
Samples: 4

Max nTPM: 729.7
Min nTPM: 486.2
Sample A Female 729.7
Sample B Female 486.2
Sample C Male 601.5
Sample D Male 622.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 610.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 610.4
Samples: 4

Max nTPM: 639.5
Min nTPM: 586.2
Sample A Male 586.2
Sample B Male 639.5
Sample C Female 601.1
Sample D Female 614.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 18.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 18.5
70812889 Antisense, RP_050712_02_G12, Mouse strain C57BL/6J (56 days, male) 19.4
83161 Antisense, RP_040407_01_G06, Mouse strain C57BL/6J (56 days, male) 17.6
Pons
Expression energy: 18.2
83161 Antisense, RP_040407_01_G06, Mouse strain C57BL/6J (56 days, male) 18.5
70812889 Antisense, RP_050712_02_G12, Mouse strain C57BL/6J (56 days, male) 18.0

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