HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:378.4 nTPM
HPA Brain:677.4 nTPM
GTEx:378.4 nTPM
FANTOM5:1244.2 Scaled Tags Per Million
Pig:743.2 nTPM
Mouse:1544.0 nTPM
Allen mouse:27.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012911
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 677.4
Sample id Sample description nTPM
Hippocampus
nTPM: 522.4
1898 Male, age 80, left hemisphere 817.8
1855 Male, age 76, left hemisphere 602.3
2621 Female, age 67, right hemisphere 599.6
1911 Female, age 85, right hemisphere 437.6
2148 Female, age 91, left hemisphere 423.8
2529 Female, age 94, left hemisphere 253.3
Dentate gyrus
nTPM: 602.4
1927 Female, age 91, both hemispheres 842.7
2530 Female, age 94, left hemisphere 757.2
2010 Male, age 76, both hemispheres 740.6
2246 Female, age 85, both hemispheres 462.0
2528 Male, age 74, both hemispheres 449.4
2531 Female, age 67, both hemispheres 362.5
Entorhinal gyrus
nTPM: 344.2
2764 Male, age 80, right hemisphere 422.0
1938 Female, age 85, left hemisphere 410.8
1787 Male, age 76, left hemisphere 386.5
2613 Female, age 94, left hemisphere 332.6
2117 Female, age 91, right hemisphere 320.6
2686 Male, age 75, right hemisphere 192.8
Hippocampus, CA1
nTPM: 677.4
2749 Male, age 80, left hemisphere 1250.1
1873 Female, age 85, both hemispheres 830.0
2045 Male, age 76, both hemispheres 565.2
2527 Male, age 74, both hemispheres 427.9
2082 Female, age 91, right hemisphere 313.8
Hippocampus, CA2
nTPM: 580.6
1892 Male, age 76, both hemispheres 980.9
1963 Male, age 80, left hemisphere 825.8
2249 Male, age 74, both hemispheres 570.6
2437 Female, age 94, left hemisphere 483.3
1940 Female, age 85, left hemisphere 329.0
2113 Female, age 91, right hemisphere 293.9
Hippocampus, CA3
nTPM: 570.2
2137 Male, age 80, left hemisphere 764.7
1867 Male, age 76, both hemispheres 744.3
2436 Male, age 74, both hemispheres 718.7
1891 Female, age 85, both hemispheres 487.7
2620 Female, age 94, left hemisphere 409.3
2861 Female, age 67, both hemispheres 296.7
Parahippocampal cortex
nTPM: 386.3
2250 Female, age 67, right hemisphere 490.7
1990 Female, age 91, right hemisphere 474.8
2245 Female, age 91, both hemispheres 466.0
1850 Male, age 80, both hemispheres 456.5
2018 Male, age 76, both hemispheres 429.0
1933 Female, age 85, both hemispheres 424.2
2693 Female, age 94, both hemispheres 373.0
2532 Female, age 72, left hemisphere 344.6
2692 Male, age 74, both hemispheres 234.0
2622 Female, age 67, right hemisphere 170.0
Perirhinal gyrus
nTPM: 476.2
1847 Female, age 91, left hemisphere 614.8
2521 Female, age 94, right hemisphere 530.1
1841 Female, age 85, right hemisphere 429.9
1794 Male, age 80, right hemisphere 429.3
2848 Male, age 76, right hemisphere 377.1
Subiculum
nTPM: 435.3
1901 Male, age 80, both hemispheres 618.6
1977 Female, age 85, both hemispheres 496.0
2042 Male, age 76, both hemispheres 470.8
2438 Female, age 94, left hemisphere 433.7
2729 Female, age 91, right hemisphere 316.5
2619 Male, age 74, both hemispheres 276.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 378.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 378.4
Samples: 197

Max nTPM: 1277.6
Min nTPM: 76.5
Std nTPM: 216.0
Median nTPM: 344.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1277.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1108.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1041.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 906.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 875.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 861.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 817.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 803.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 791.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 759.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 752.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1244.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1244.2
FF:10169-103B7 60 years, female 1880.8
FF:10153-102I9 76 years, female 607.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 743.2
Pig sample Sample description nTPM
Subiculum
nTPM: 476.6
Samples: 4

Max nTPM: 559.7
Min nTPM: 401.1
Sample A Female 559.7
Sample B Female 401.6
Sample C Male 544.0
Sample D Male 401.1
Dorsal hippocampus
nTPM: 743.2
Samples: 4

Max nTPM: 929.5
Min nTPM: 534.2
Sample A Female 929.5
Sample B Female 778.8
Sample C Male 730.2
Sample D Male 534.2
Entorhinal cortex
nTPM: 524.4
Samples: 4

Max nTPM: 640.3
Min nTPM: 448.2
Sample A Female 547.3
Sample B Female 640.3
Sample C Male 448.2
Sample D Male 461.8
Ventral hippocampus
nTPM: 725.6
Samples: 4

Max nTPM: 911.5
Min nTPM: 471.9
Sample A Female 911.5
Sample B Female 471.9
Sample C Male 802.1
Sample D Male 716.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1544.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1244.2
Samples: 4

Max nTPM: 1306.2
Min nTPM: 1206.5
Sample A Male 1221.2
Sample B Male 1242.7
Sample C Female 1306.2
Sample D Female 1206.5
Hippocampal formation
nTPM: 1544.0
Samples: 4

Max nTPM: 1647.0
Min nTPM: 1422.1
Sample A Male 1524.6
Sample B Male 1582.4
Sample C Female 1647.0
Sample D Female 1422.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 27.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.7
68546368 Antisense, RP_050120_02_D04, Mouse strain C57BL/6J (56 days, male) 33.2
70919203 Antisense, RP_050712_04_D08, Mouse strain C57BL/6J (56 days, male) 22.2

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