PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:418.6 nTPM
FANTOM5:28.6 Scaled Tags Per Million
Pig:520.7 nTPM
Mouse:920.0 nTPM
Allen mouse:10.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 418.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 345.9
2090 Male, age 80, both hemispheres 399.2
2188 Female, age 91, both hemispheres 373.5
1984 Male, age 76, both hemispheres 321.7
2301 Female, age 85, both hemispheres 289.1
Area postrema
nTPM: 350.6
2306 Male, age 80, both hemispheres 424.7
2799 Male, age 61, both hemispheres 396.1
2054 Male, age 76, both hemispheres 231.1
Dorsal cochlear nucleus
nTPM: 347.2
2187 Female, age 91, both hemispheres 397.3
2802 Male, age 74, right hemisphere 391.0
2378 Male, age 80, both hemispheres 352.1
2370 Male, age 61, both hemispheres 309.9
2058 Male, age 76, both hemispheres 285.8
Dorsal medullary reticular nucleus
nTPM: 286.5
2373 Male, age 61, both hemispheres 323.1
2040 Female, age 85, both hemispheres 285.5
2088 Male, age 76, both hemispheres 250.8
Dorsal motor vagal complex
nTPM: 330.0
2797 Male, age 61, both hemispheres 479.8
2643 Male, age 74, both hemispheres 362.5
2807 Female, age 85, both hemispheres 361.0
2133 Female, age 91, both hemispheres 343.9
2844 Male, age 55, unknown 289.5
2000 Male, age 74, unknown 283.4
2813 Female, age 72, unknown 276.4
2185 Male, age 76, both hemispheres 243.3
Dorsal tegmental nucleus
nTPM: 333.2
2326 Male, age 74, both hemispheres 406.3
2083 Male, age 80, both hemispheres 368.9
1936 Male, age 76, left hemisphere 288.9
2358 Male, age 61, both hemispheres 268.6
Dorsolateral tegmental area
nTPM: 346.9
2654 Male, age 80, both hemispheres 383.9
2360 Male, age 74, both hemispheres 364.5
2337 Male, age 61, both hemispheres 361.9
2751 Female, age 85, both hemispheres 346.3
2141 Male, age 76, both hemispheres 278.1
Gigantocellular reticular nuclei, medullary
nTPM: 315.6
2314 Male, age 61, both hemispheres 381.9
2387 Female, age 91, both hemispheres 319.5
1876 Female, age 85, both hemispheres 318.7
2310 Male, age 80, both hemispheres 300.3
2022 Male, age 76, right hemisphere 296.0
2462 Male, age 74, both hemispheres 277.4
Gigantocellular reticular nuclei, pars
nTPM: 275.0
2084 Female, age 85, both hemispheres 323.0
2168 Male, age 76, both hemispheres 283.6
2336 Male, age 61, both hemispheres 266.7
2706 Male, age 80, both hemispheres 255.9
2330 Male, age 80, both hemispheres 245.7
Inferior olive
nTPM: 363.3
2379 Male, age 80, both hemispheres 394.0
2178 Male, age 61, both hemispheres 373.3
2085 Female, age 85, both hemispheres 365.3
2563 Male, age 74, both hemispheres 364.3
2628 Female, age 91, both hemispheres 319.6
Kolliker-Fuse nucleus
nTPM: 328.3
2315 Male, age 76, right hemisphere 395.4
2793 Female, age 91, left hemisphere 298.5
2163 Male, age 80, both hemispheres 290.8
Lateral lemniscal nuclei
nTPM: 278.1
2746 Female, age 85, left hemisphere 320.6
2169 Male, age 76, both hemispheres 316.9
2453 Male, age 74, right hemisphere 266.2
2320 Female, age 91, left hemisphere 257.7
2036 Male, age 80, both hemispheres 229.2
Lateral medullary reticular nucleus
nTPM: 348.1
2852 Male, age 80, both hemispheres 387.4
2190 Female, age 85, both hemispheres 386.5
2804 Female, age 91, both hemispheres 374.2
2305 Male, age 74, both hemispheres 366.4
2374 Male, age 61, both hemispheres 310.1
2044 Male, age 76, both hemispheres 264.0
Lateral parabrachial nucleus
nTPM: 334.6
2792 Male, age 76, both hemispheres 380.6
2013 Male, age 80, both hemispheres 363.3
2139 Female, age 85, right hemisphere 355.3
2790 Male, age 61, both hemispheres 239.4
Lateral vestibular nucleus
nTPM: 302.5
2311 Male, age 80, both hemispheres 359.8
2184 Male, age 76, both hemispheres 245.2
Locus coeruleus
nTPM: 303.8
2720 Male, age 74, both hemispheres 329.6
2123 Female, age 91, both hemispheres 326.7
2788 Male, age 74, unknown 313.9
2162 Male, age 80, both hemispheres 312.2
2014 Male, age 55, unknown 303.8
2317 Female, age 72, unknown 299.8
1980 Male, age 76, both hemispheres 240.3
Medial olivary nucleus
nTPM: 418.6
1943 Male, age 61, both hemispheres 459.3
2138 Female, age 91, both hemispheres 431.4
1962 Male, age 76, both hemispheres 420.5
2851 Male, age 80, both hemispheres 363.1
Medial parabrachial nucleus
nTPM: 317.0
2170 Female, age 91, both hemispheres 411.9
2463 Female, age 85, right hemisphere 326.0
2854 Male, age 80, both hemispheres 321.3
2786 Male, age 76, both hemispheres 273.7
2156 Male, age 61, both hemispheres 252.0
Medial periolivary nuclei
nTPM: 312.0
2063 Male, age 76, both hemispheres 381.8
2081 Male, age 80, both hemispheres 339.3
2791 Male, age 74, right hemisphere 289.6
2458 Female, age 91, both hemispheres 289.3
2171 Female, age 85, both hemispheres 259.8
Medial vestibular nucleus
nTPM: 307.0
2803 Female, age 91, both hemispheres 350.1
2743 Female, age 85, both hemispheres 337.0
2801 Male, age 74, both hemispheres 312.1
2093 Male, age 80, both hemispheres 306.9
2624 Male, age 61, both hemispheres 274.5
2134 Male, age 76, both hemispheres 261.3
Motor facial nucleus
nTPM: 294.9
2062 Male, age 76, both hemispheres 372.1
2126 Male, age 61, both hemispheres 311.4
2365 Male, age 74, right hemisphere 306.4
2795 Female, age 91, both hemispheres 291.3
2697 Female, age 85, both hemispheres 271.4
2327 Male, age 80, both hemispheres 216.9
Motor hypoglossal nucleus
nTPM: 291.5
2132 Female, age 85, both hemispheres 355.6
2125 Female, age 91, both hemispheres 344.3
2182 Male, age 80, both hemispheres 312.0
2277 Male, age 76, both hemispheres 234.1
2461 Male, age 61, both hemispheres 211.5
Motor trigeminal nucleus
nTPM: 285.7
2321 Female, age 91, both hemispheres 306.0
2309 Male, age 76, both hemispheres 293.1
2335 Male, age 61, both hemispheres 282.0
2079 Male, age 80, both hemispheres 276.6
2560 Male, age 74, both hemispheres 271.0
Nuclei of the trapezoid body
nTPM: 301.9
1983 Male, age 76, both hemispheres 428.2
2159 Male, age 61, both hemispheres 284.7
2166 Male, age 80, both hemispheres 273.3
2735 Female, age 85, both hemispheres 264.7
2368 Female, age 91, both hemispheres 258.4
Nucleus ambiguus
nTPM: 296.5
2071 Male, age 76, both hemispheres 377.9
2096 Female, age 85, both hemispheres 215.1
Nucleus cuneatus
nTPM: 295.5
2808 Female, age 85, both hemispheres 367.0
2380 Male, age 80, both hemispheres 363.5
2805 Female, age 91, both hemispheres 321.1
2564 Male, age 74, both hemispheres 320.8
2376 Male, age 61, both hemispheres 301.3
2381 Male, age 80, both hemispheres 284.0
2562 Male, age 61, both hemispheres 263.5
2100 Male, age 76, both hemispheres 224.4
2131 Male, age 76, both hemispheres 213.7
Nucleus gracilis
nTPM: 352.6
2299 Female, age 85, both hemispheres 366.0
2382 Male, age 80, both hemispheres 355.2
2627 Male, age 74, both hemispheres 336.7
Nucleus raphe magnus
nTPM: 270.8
2459 Female, age 91, both hemispheres 292.1
2455 Male, age 74, both hemispheres 287.0
2160 Male, age 61, both hemispheres 276.0
2051 Male, age 76, both hemispheres 269.9
2328 Male, age 80, both hemispheres 256.3
2172 Female, age 85, both hemispheres 243.5
Nucleus raphe obscurus
nTPM: 361.4
2845 Female, age 85, midline 375.5
2142 Male, age 76, midline 370.7
2800 Male, age 61, midline 338.0
Nucleus raphe pallidus
nTPM: 388.4
1924 Male, age 61, midline 456.0
2145 Male, age 76, midline 362.2
2183 Male, age 80, midline 347.1
Nucleus tractus solitarii
nTPM: 328.0
2144 Female, age 91, right hemisphere 498.6
2191 Female, age 85, both hemispheres 350.2
2656 Male, age 76, both hemispheres 239.1
2307 Male, age 80, both hemispheres 224.3
Paramedian reticular nucleus
nTPM: 306.1
2057 Male, age 80, both hemispheres 325.1
2313 Male, age 61, both hemispheres 305.1
2052 Male, age 76, both hemispheres 301.1
2050 Female, age 85, both hemispheres 293.0
Parvicellular reticular nuclei
nTPM: 297.1
2119 Male, age 80, both hemispheres 336.8
2095 Male, age 76, both hemispheres 332.1
2558 Male, age 74, both hemispheres 222.4
Parvicellular reticular nuclei, medullary
nTPM: 306.1
2091 Female, age 85, both hemispheres 314.5
2189 Female, age 91, both hemispheres 309.4
2181 Male, age 80, left hemisphere 294.4
Pedunculopontine tegmental nucleus
nTPM: 329.0
2338 Male, age 61, both hemispheres 370.1
2334 Male, age 80, both hemispheres 351.1
1921 Female, age 85, both hemispheres 265.7
Peritrigeminal nucleus
nTPM: 359.0
2067 Female, age 85, both hemispheres 424.7
2136 Male, age 76, both hemispheres 349.3
2179 Male, age 61, both hemispheres 302.9
Pontine nuclei
nTPM: 317.5
2319 Female, age 91, both hemispheres 352.3
1968 Male, age 76, left hemisphere 340.3
1863 Male, age 55, unknown 327.7
2109 Female, age 72, unknown 318.5
2115 Male, age 80, left hemisphere 307.0
2727 Male, age 61, right hemisphere 305.2
2454 Male, age 74, left hemisphere 297.1
2787 Female, age 85, both hemispheres 292.1
Pontine raphe nucleus
nTPM: 309.5
2122 Female, age 85, midline 342.0
2853 Male, age 76, midline 277.1
Posteroventral cochlear nucleus
nTPM: 377.6
2341 Male, age 80, both hemispheres 451.0
2135 Female, age 91, both hemispheres 422.8
2371 Male, age 61, both hemispheres 379.6
2752 Female, age 85, both hemispheres 342.2
2070 Male, age 76, both hemispheres 292.3
Prepositus hypoglossal nucleus
nTPM: 356.0
2086 Male, age 80, both hemispheres 366.5
2855 Female, age 85, right hemisphere 345.5
Principal sensory trigeminal nucleus
nTPM: 268.9
2158 Male, age 61, both hemispheres 297.0
2367 Female, age 91, left hemisphere 288.8
2324 Male, age 76, both hemispheres 245.3
2008 Male, age 80, left hemisphere 244.3
Reticular pontine nucleus, caudal
nTPM: 307.5
2092 Male, age 76, both hemispheres 373.0
2559 Male, age 74, both hemispheres 326.1
2457 Female, age 91, both hemispheres 325.4
2332 Male, age 80, right hemisphere 205.4
Reticular pontine nucleus, oral
nTPM: 310.1
1939 Male, age 80, both hemispheres 332.3
2366 Female, age 91, both hemispheres 317.2
2167 Male, age 76, both hemispheres 312.1
2361 Male, age 74, both hemispheres 307.5
2012 Female, age 85, both hemispheres 281.4
Reticulotegmental nucleus
nTPM: 313.0
2452 Male, age 74, both hemispheres 361.1
2322 Female, age 91, both hemispheres 314.1
2325 Male, age 76, both hemispheres 288.5
2333 Male, age 80, both hemispheres 288.4
Spinal trigeminal nucleus, caudal
nTPM: 284.8
2312 Male, age 61, both hemispheres 299.7
2308 Male, age 80, both hemispheres 297.5
2642 Male, age 74, both hemispheres 292.1
2390 Female, age 91, both hemispheres 283.0
2447 Male, age 76, both hemispheres 251.5
Spinal trigeminal nucleus, interpolar
nTPM: 299.4
2066 Male, age 76, right hemisphere 326.3
2033 Male, age 80, both hemispheres 311.4
2386 Female, age 85, both hemispheres 309.0
2389 Female, age 91, both hemispheres 306.5
2625 Male, age 61, both hemispheres 243.5
Spinal trigeminal nucleus, oral
nTPM: 280.5
1978 Male, age 76, both hemispheres 283.6
2737 Female, age 85, both hemispheres 279.1
2164 Male, age 80, both hemispheres 278.9
Spinal vestibular nucleus
nTPM: 347.3
2384 Male, age 74, both hemispheres 426.8
2806 Female, age 85, both hemispheres 361.5
2780 Male, age 80, both hemispheres 344.7
2796 Male, age 61, both hemispheres 325.2
2186 Female, age 91, both hemispheres 320.1
2748 Male, age 76, both hemispheres 305.4
Subcoeruleus area
nTPM: 322.2
2451 Male, age 74, both hemispheres 404.9
2369 Female, age 85, left hemisphere 353.6
1958 Male, age 80, both hemispheres 301.7
2323 Female, age 91, left hemisphere 276.2
2089 Male, age 76, left hemisphere 274.5
Superior olive
nTPM: 288.7
2020 Male, age 76, both hemispheres 345.8
2364 Male, age 74, right hemisphere 302.4
1875 Female, age 85, both hemispheres 280.4
2561 Female, age 91, both hemispheres 266.3
2329 Male, age 80, right hemisphere 248.6
Superior vestibular nucleus
nTPM: 366.9
2383 Male, age 74, both hemispheres 422.8
2015 Male, age 80, both hemispheres 374.8
2061 Male, age 76, both hemispheres 302.9
Ventral medullary reticular nucleus
nTPM: 327.7
2372 Male, age 61, both hemispheres 377.2
2060 Male, age 76, both hemispheres 278.1
Ventral periolivary nuclei
nTPM: 283.0
2023 Male, age 76, both hemispheres 339.0
2165 Male, age 80, both hemispheres 285.6
2794 Female, age 91, left hemisphere 272.4
2130 Female, age 85, both hemispheres 235.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 368.7
2118 Male, age 80, both hemispheres 442.7
2302 Female, age 91, both hemispheres 395.3
2741 Female, age 85, both hemispheres 355.9
2180 Male, age 61, both hemispheres 333.6
1986 Male, age 76, both hemispheres 315.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 292.3
2161 Male, age 80, both hemispheres 308.0
1959 Male, age 76, both hemispheres 298.1
2456 Female, age 91, both hemispheres 298.1
2359 Male, age 61, both hemispheres 292.0
2840 Female, age 85, both hemispheres 285.9
2449 Male, age 74, both hemispheres 272.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 28.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 25.0
FF:10182-103D2 60 years, female 29.9
FF:10165-103B3 76 years, female 20.1
Medulla oblongata
Scaled Tags Per Million: 19.5
FF:10038-101F2 18-64 years, mixed 22.6
FF:10155-103A2 76 years, female 18.1
FF:10174-103C3 60 years, female 17.9
Pons
Scaled Tags Per Million: 28.6
FF:10033-101E6 18-54 years, mixed 28.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 520.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 443.6
Samples: 4

Max nTPM: 533.2
Min nTPM: 383.7
Sample A Female 384.0
Sample B Female 383.7
Sample C Male 473.6
Sample D Male 533.2
Pons
nTPM: 520.7
Samples: 4

Max nTPM: 690.2
Min nTPM: 382.3
Sample A Female 517.9
Sample B Female 382.3
Sample C Male 690.2
Sample D Male 492.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 920.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 920.0
Samples: 4

Max nTPM: 946.6
Min nTPM: 901.1
Sample A Male 928.4
Sample B Male 903.9
Sample C Female 901.1
Sample D Female 946.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 10.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.0
68191186 Antisense, RP_041122_02_H09, Mouse strain C57BL/6J (56 days, male) 8.0
Pons
Expression energy: 10.5
68191186 Antisense, RP_041122_02_H09, Mouse strain C57BL/6J (56 days, male) 10.5

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