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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
835.4
nTPM
GTEx:
835.4
nTPM
FANTOM5:
29.0
Scaled Tags Per Million
Pig:
172.1
nTPM
Mouse:
1123.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
835.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 835.4
Samples: 105
Max nTPM: 1447.5
Min nTPM: 506.8
Std nTPM: 156.4
Median nTPM:
491_1
89 years, female
1447.5
495_1
57 years, female
1202.1
35_1
74 years, female
1155.3
490_1
67 years, female
1120.0
389_1
86 years, female
1073.0
415_1
77 years, female
1070.0
466_1
57 years, female
1056.9
315_1
62 years, female
1045.7
307_1
66 years, female
1042.4
162_1
79 years, female
1036.1
321_1
62 years, female
1018.9
413_1
59 years, female
1017.2
379_1
60 years, male
1017.0
153_1
70 years, female
1010.7
396_1
62 years, male
1003.9
414_1
84 years, female
1002.6
246_1
77 years, male
997.6
120_1
70 years, female
987.7
139_1
64 years, female
986.1
119_1
70 years, female
985.4
126_1
63 years, male
980.9
308_1
70 years, female
977.2
145_1
84 years, male
975.9
17_1
71 years, male
970.0
526_1
61 years, male
964.1
384_1
83 years, male
961.2
217_1
76 years, male
956.9
89_1
63 years, male
953.5
375_1
74 years, female
950.3
501_1
88 years, male
926.4
237_1
82 years, male
918.4
137_1
83 years, male
916.7
311_1
78 years, male
916.2
42_1
85 years, male
910.3
142_1
61 years, female
907.8
386_1
76 years, male
890.2
4_1
88 years, female
883.1
32_1
67 years, male
882.1
347_1
72 years, male
881.3
117_1
61 years, male
878.4
447_1
81 years, male
865.0
322_1
76 years, male
857.1
499_1
55 years, female
856.0
189_1
76 years, male
854.0
265_1
87 years, male
852.4
6_1
73 years, female
843.0
324_1
76 years, male
835.7
518_1
75 years, female
834.0
313_1
79 years, female
832.0
173_1
67 years, male
831.2
452_1
88 years, female
829.4
149_1
88 years, male
829.3
218_1
71 years, female
825.2
377_1
82 years, female
824.0
2_1
77 years, female
814.9
229_1
69 years, female
814.4
18_1
88 years, male
810.5
468_1
89 years, male
809.8
314_1
67 years, male
807.0
109_1
81 years, female
806.4
266_1
85 years, male
801.3
376_1
75 years, female
795.2
81_1
67 years, male
786.3
43_1
64 years, female
783.5
320_1
89 years, female
782.0
355_1
70 years, female
775.7
288_1
66 years, female
771.6
394_1
75 years, female
759.7
115_1
83 years, male
757.1
254_1
77 years, female
753.7
41_1
94 years, female
748.9
348_1
84 years, male
743.1
317_1
60 years, male
726.5
405_1
91 years, male
726.1
349_1
83 years, male
720.9
243_1
75 years, male
720.3
480_1
63 years, male
719.3
99_1
64 years, male
716.5
291_1
76 years, male
705.2
9_1
66 years, female
702.3
251_1
78 years, male
699.3
351_1
91 years, male
698.1
295_1
61 years, female
697.0
335_1
73 years, female
696.7
503_1
68 years, male
694.3
404_1
82 years, female
693.8
316_1
62 years, male
690.4
353_1
82 years, female
682.1
177_1
74 years, male
676.4
517_1
88 years, male
671.8
352_1
62 years, male
669.4
286_1
68 years, female
668.1
354_1
81 years, female
664.1
319_1
81 years, male
658.4
172_1
72 years, female
653.4
264_1
73 years, female
652.9
506_1
65 years, male
637.1
292_1
71 years, male
622.9
350_1
84 years, female
620.0
425_1
59 years, female
600.7
406_1
79 years, male
599.1
318_1
68 years, male
596.8
293_1
68 years, female
581.0
356_1
87 years, female
579.6
163_1
78 years, male
506.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.