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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:453.3 nTPM
HPA Brain:196.5 nTPM
GTEx:453.3 nTPM
FANTOM5:269.1 Scaled Tags Per Million
Pig:475.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA063339
Glial cells Not detected
Neuronal cells Medium

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

196.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 163.1
2846 Female, age 79, unknown 213.5
1857 Female, age 85, left hemisphere 175.3
2290 Female, age 72, unknown 175.0
1781 Male, age 74, unknown 166.2
1854 Male, age 80, left hemisphere 165.5
2288 Male, age 75, left hemisphere 142.5
2289 Male, age 61, right hemisphere 136.1
2481 Female, age 94, left hemisphere 130.9
Globus pallidus, externus
nTPM: 196.5
1996 Male, age 80, right hemisphere 224.1
2772 Female, age 79, unknown 221.2
2395 Male, age 75, both hemispheres 216.7
2646 Male, age 61, right hemisphere 169.1
2567 Female, age 72, unknown 151.6
Globus pallidus, internus
nTPM: 195.0
2287 Male, age 75, right hemisphere 225.2
2037 Male, age 80, right hemisphere 212.1
2483 Female, age 94, right hemisphere 210.9
2566 Female, age 72, unknown 187.2
2778 Female, age 91, both hemispheres 182.9
2111 Female, age 85, right hemisphere 175.8
1818 Male, age 74, unknown 171.1
Nucleus accumbens
nTPM: 173.1
2698 Female, age 72, unknown 221.4
1806 Female, age 85, left hemisphere 180.8
1783 Male, age 74, unknown 178.6
1856 Female, age 91, right hemisphere 176.2
2732 Male, age 80, right hemisphere 172.5
2391 Female, age 94, left hemisphere 171.3
2824 Male, age 61, right hemisphere 146.1
2286 Male, age 75, left hemisphere 138.1
Nucleus basalis of Meynert
nTPM: 173.4
2569 Male, age 61, both hemispheres 181.5
2393 Male, age 80, right hemisphere 173.0
2821 Male, age 75, both hemispheres 171.7
2484 Female, age 94, left hemisphere 167.5
Nucleus of the diagonal band
nTPM: 130.3
1979 Male, age 74, unknown 148.2
1812 Female, age 91, both hemispheres 141.3
2195 Female, age 85, both hemispheres 128.6
2775 Male, age 80, right hemisphere 124.4
2029 Male, age 61, right hemisphere 109.0
Putamen
nTPM: 159.6
2466 Female, age 79, unknown 181.4
2647 Male, age 75, left hemisphere 165.4
2482 Female, age 94, left hemisphere 162.8
1937 Female, age 91, right hemisphere 161.4
1838 Male, age 80, right hemisphere 151.8
2489 Female, age 72, unknown 149.5
1829 Male, age 74, unknown 145.1
Septal nuclei
nTPM: 136.4
2394 Male, age 61, left hemisphere 160.1
2199 Male, age 80, right hemisphere 150.0
2031 Female, age 72, unknown 137.6
2059 Female, age 85, both hemispheres 136.4
2629 Female, age 94, right hemisphere 135.2
2009 Female, age 91, both hemispheres 123.4
1960 Male, age 74, unknown 112.3
Stria terminalis, bed nucleus
nTPM: 127.9
2201 Male, age 74, unknown 148.0
1974 Female, age 91, both hemispheres 128.3
2486 Female, age 94, both hemispheres 107.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

453.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 368.7
Samples: 246

Max nTPM: 861.1
Min nTPM: 159.9
Std nTPM: 87.5
Median nTPM: 356.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 861.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 703.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 689.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 669.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 629.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 623.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 612.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 576.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 562.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 544.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 532.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 510.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 510.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 498.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 491.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 482.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 481.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 481.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 475.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 474.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 472.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 470.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 469.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 466.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 464.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 463.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 463.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 461.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 460.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 457.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 452.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 450.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 449.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 447.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 446.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 446.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 445.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 445.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 443.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 441.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 440.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 434.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 434.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 433.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 430.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 430.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 428.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 428.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 426.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 425.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 425.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 424.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 421.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 420.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 420.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 417.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 417.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 415.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 414.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 412.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 412.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 409.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 407.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 406.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 406.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 404.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 404.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 403.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 403.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 401.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 401.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 401.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 400.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 396.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 396.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 395.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 394.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 394.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 392.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 391.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 391.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 391.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 387.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 385.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 383.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 383.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 383.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 383.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 382.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 382.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 382.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 380.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 380.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 379.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 377.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 375.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 375.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 374.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 372.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 371.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 371.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 371.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 368.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 368.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 367.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 367.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 365.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 365.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 365.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 365.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 364.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 363.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 363.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 362.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 362.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 361.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 361.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 359.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 359.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 358.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 357.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 357.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 357.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 356.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 354.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 354.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 353.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 352.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 352.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 350.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 349.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 348.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 348.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 348.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 347.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 344.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 344.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 343.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 340.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 339.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 339.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 339.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 339.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 339.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 338.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 338.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 337.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 336.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 335.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 335.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 334.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 333.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 333.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 332.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 331.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 331.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 331.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 331.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 330.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 330.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 330.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 330.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 329.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 329.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 328.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 328.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 326.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 325.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 325.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 324.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 324.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 324.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 321.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 321.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 320.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 319.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 318.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 317.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 317.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 315.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 315.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 313.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 311.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 311.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 310.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 309.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 309.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 307.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 307.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 307.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 307.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 306.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 305.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 305.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 304.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 304.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 304.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 303.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 299.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 298.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 297.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 297.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 296.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 294.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 294.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 294.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 294.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 294.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 290.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 290.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 289.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 289.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 288.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 286.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 282.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 282.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 280.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 280.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 280.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 279.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 278.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 278.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 277.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 276.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 274.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 272.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 272.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 268.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 264.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 260.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 259.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 259.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 257.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 257.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 256.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 253.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 252.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 250.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 250.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 248.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 240.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 239.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 239.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 232.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 228.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 159.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 453.3
Samples: 246

Max nTPM: 1236.0
Min nTPM: 243.6
Std nTPM: 113.7
Median nTPM: 432.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1236.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 901.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 896.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 818.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 811.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 746.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 742.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 730.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 717.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 645.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 640.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 632.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 630.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 624.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 624.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 603.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 598.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 596.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 591.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 587.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 578.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 575.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 573.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 571.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 570.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 570.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 564.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 562.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 561.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 559.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 558.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 551.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 549.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 545.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 544.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 542.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 540.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 537.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 535.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 532.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 532.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 531.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 530.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 529.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 522.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 522.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 518.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 516.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 516.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 514.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 513.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 512.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 509.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 509.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 505.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 505.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 505.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 505.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 502.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 501.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 501.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 500.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 500.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 499.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 496.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 496.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 496.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 495.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 494.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 492.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 492.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 489.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 486.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 485.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 484.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 484.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 482.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 482.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 481.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 481.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 479.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 479.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 478.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 476.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 476.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 475.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 474.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 473.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 473.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 473.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 472.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 471.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 470.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 468.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 461.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 460.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 459.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 458.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 458.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 458.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 457.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 455.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 454.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 454.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 452.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 451.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 451.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 451.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 450.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 448.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 446.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 445.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 444.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 443.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 442.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 442.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 439.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 438.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 437.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 435.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 434.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 433.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 432.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 431.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 431.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 429.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 429.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 428.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 427.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 427.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 427.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 427.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 426.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 426.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 426.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 425.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 425.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 425.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 425.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 424.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 424.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 421.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 421.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 420.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 419.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 419.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 418.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 416.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 415.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 415.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 415.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 412.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 411.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 411.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 410.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 409.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 409.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 408.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 408.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 407.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 407.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 406.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 403.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 403.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 402.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 402.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 401.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 401.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 400.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 398.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 396.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 396.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 394.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 394.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 393.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 393.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 393.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 393.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 392.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 392.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 391.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 389.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 389.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 389.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 388.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 388.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 388.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 387.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 386.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 386.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 386.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 385.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 383.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 382.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 378.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 378.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 376.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 373.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 373.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 370.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 368.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 368.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 363.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 359.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 358.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 354.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 353.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 351.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 350.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 350.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 350.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 347.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 343.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 342.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 341.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 338.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 338.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 337.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 337.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 337.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 336.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 333.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 332.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 327.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 326.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 322.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 322.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 322.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 322.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 320.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 319.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 319.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 317.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 315.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 315.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 314.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 310.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 304.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 304.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 299.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 297.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 294.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 286.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 274.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 260.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 243.6
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Brain - Putamen (basal ganglia)
Average nTPM: 387.3
Samples: 205

Max nTPM: 859.5
Min nTPM: 217.0
Std nTPM: 99.8
Median nTPM: 370.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 859.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 783.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 774.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 740.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 655.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 646.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 626.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 621.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 599.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 585.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 579.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 568.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 568.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 562.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 557.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 556.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 553.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 518.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 514.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 503.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 502.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 494.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 493.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 489.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 484.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 483.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 483.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 475.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 473.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 471.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 464.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 463.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 460.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 454.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 451.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 450.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 443.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 438.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 434.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 434.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 434.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 433.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 431.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 430.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 430.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 429.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 429.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 428.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 428.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 427.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 422.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 419.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 417.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 417.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 417.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 416.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 414.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 413.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 413.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 411.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 410.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 410.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 407.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 406.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 406.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 404.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 403.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 401.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 401.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 400.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 399.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 396.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 396.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 396.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 396.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 395.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 395.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 395.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 394.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 394.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 394.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 393.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 390.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 389.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 389.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 389.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 386.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 386.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 385.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 385.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 384.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 384.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 381.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 380.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 379.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 379.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 377.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 377.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 372.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 371.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 370.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 370.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 370.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 369.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 368.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 368.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 367.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 367.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 367.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 367.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 366.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 366.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 366.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 363.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 361.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 361.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 359.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 358.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 357.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 355.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 354.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 354.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 350.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 349.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 348.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 348.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 347.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 347.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 345.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 345.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 345.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 344.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 344.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 343.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 341.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 341.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 341.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 341.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 339.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 337.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 337.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 334.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 334.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 333.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 332.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 328.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 328.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 327.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 327.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 325.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 324.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 320.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 319.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 318.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 317.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 317.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 316.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 315.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 315.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 313.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 313.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 312.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 311.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 310.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 308.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 307.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 307.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 305.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 304.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 304.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 304.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 304.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 302.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 300.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 299.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 296.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 294.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 292.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 291.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 286.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 285.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 285.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 284.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 284.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 283.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 283.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 281.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 278.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 276.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 275.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 274.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 274.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 274.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 273.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 273.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 272.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 268.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 263.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 262.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 261.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 259.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 257.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 250.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 239.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 217.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

269.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 242.5
FF:10164-103B2 76 years, female 242.5
Nucleus accumbens
Scaled Tags Per Million: 163.7
FF:10037-101F1 23-56 years, mixed 163.7
Putamen
Scaled Tags Per Million: 269.1
FF:10176-103C5 60 years, female 269.1
Globus pallidus
Scaled Tags Per Million: 219.9
FF:10161-103A8 76 years, female 239.0
FF:10175-103C4 60 years, female 200.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

475.9
Pig sample Sample description nTPM
Caudate
nTPM: 372.1
Samples: 4

Max nTPM: 420.6
Min nTPM: 288.1
Sample A Female 391.4
Sample B Female 388.1
Sample C Male 420.6
Sample D Male 288.1
Putamen
nTPM: 475.9
Samples: 4

Max nTPM: 605.1
Min nTPM: 335.5
Sample A Female 605.1
Sample B Female 335.5
Sample C Male 508.4
Sample D Male 454.7
Septum
nTPM: 466.5
Samples: 4

Max nTPM: 591.6
Min nTPM: 396.6
Sample A Female 591.6
Sample B Female 443.9
Sample C Male 433.8
Sample D Male 396.6
Ventral pallidum
nTPM: 411.7
Samples: 4

Max nTPM: 481.2
Min nTPM: 354.8
Sample A Female 354.8
Sample B Female 481.2
Sample C Male 380.7
Sample D Male 430.0

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