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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Low
Cells in molecular layer: Medium
Purkinje cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:395.7 nTPM
HPA Brain:156.6 nTPM
GTEx:395.7 nTPM
FANTOM5:220.3 Scaled Tags Per Million
Pig:541.5 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA063339
Purkinje cells High
Cells in granular layer Low
Cells in molecular layer Medium



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

156.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 156.6
1768 Female, age 72, unknown 193.6
1769 Male, age 76, right hemisphere 174.1
2006 Male, age 61, right hemisphere 169.7
1788 Male, age 55, unknown 153.5
1774 Male, age 80, left hemisphere 149.9
2055 Female, age 91, right hemisphere 147.6
2003 Female, age 85, right hemisphere 146.1
2101 Male, age 74, right hemisphere 118.2
Cerebellar nuclei
nTPM: 144.0
2175 Male, age 61, right hemisphere 164.5
1871 Male, age 74, unknown 158.2
2882 Male, age 76, left hemisphere 153.4
1879 Male, age 55, unknown 149.1
2005 Male, age 80, left hemisphere 148.4
2783 Female, age 72, unknown 146.8
2177 Female, age 85, both hemispheres 128.6
1966 Female, age 91, left hemisphere 124.4
2318 Male, age 74, left hemisphere 122.2
Flocculonodular lobe
nTPM: 152.5
1765 Male, age 55, unknown 182.8
1771 Male, age 80, left hemisphere 165.1
1767 Male, age 76, left hemisphere 161.5
2004 Male, age 61, right hemisphere 147.5
1792 Male, age 74, unknown 144.0
2176 Female, age 91, right hemisphere 143.8
1835 Female, age 85, right hemisphere 122.7
Vermis
nTPM: 136.4
1770 Male, age 76, left hemisphere 166.3
1928 Female, age 72, unknown 159.7
1825 Male, age 74, unknown 158.0
1778 Female, age 91, left hemisphere 145.4
1766 Male, age 55, unknown 130.6
1988 Female, age 85, left hemisphere 126.8
2834 Male, age 80, left hemisphere 122.5
1751 Male, age 74, right hemisphere 120.3
2460 Male, age 61, both hemispheres 97.6

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

395.7
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 395.7
Samples: 215

Max nTPM: 815.5
Min nTPM: 202.2
Std nTPM: 89.6
Median nTPM: 385.5
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 815.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 707.8
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 674.4
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 673.7
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 644.8
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 637.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 619.0
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 590.2
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 587.6
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 586.6
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 585.3
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 573.7
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 567.6
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 567.0
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 552.0
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 545.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 535.0
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 532.6
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 524.2
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 519.6
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 519.3
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 505.5
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 505.1
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 498.2
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 493.6
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 484.4
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 479.0
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 471.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 466.7
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 463.3
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 463.3
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 462.0
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 459.9
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 455.5
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 452.9
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 450.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 448.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 448.1
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 447.7
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 446.6
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 445.3
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 444.0
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 443.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 439.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 439.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 439.5
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 438.5
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 437.5
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 435.7
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 435.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 435.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 435.0
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 434.5
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 433.7
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 432.7
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 432.4
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 431.8
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 431.7
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 430.0
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 428.8
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 426.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 425.9
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 425.0
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 423.2
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 422.3
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 421.6
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 421.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 419.7
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 419.3
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 418.0
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 417.5
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 416.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 415.3
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 414.6
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 414.5
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 414.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 413.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 413.8
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 413.1
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 411.1
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 411.1
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 409.7
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 409.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 409.2
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 407.5
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 405.0
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 403.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 400.3
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 400.1
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 399.8
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 399.6
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 399.5
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 398.6
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 396.9
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 396.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 394.9
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 394.5
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 394.0
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 393.9
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 393.1
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 389.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 388.9
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 388.0
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 387.0
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 386.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 385.9
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 385.6
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 385.5
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 381.0
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 380.2
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 380.0
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 379.5
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 378.2
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 377.7
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 376.9
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 376.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 376.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 376.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 375.9
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 375.1
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 374.9
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 371.2
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 371.1
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 370.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 370.8
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 370.3
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 366.7
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 366.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 365.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 364.4
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 363.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 362.1
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 361.6
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 361.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 360.0
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 358.9
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 358.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 358.5
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 358.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 357.0
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 356.5
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 354.4
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 354.3
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 354.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 353.8
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 353.5
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 351.8
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 351.6
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 351.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 350.8
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 349.0
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 348.1
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 344.2
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 343.7
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 341.6
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 341.1
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 340.7
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 340.4
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 340.2
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 339.6
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 339.2
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 338.8
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 337.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 337.6
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 337.5
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 337.0
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 336.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 335.6
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 335.0
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 334.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 334.6
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 333.2
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 332.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 332.6
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 332.5
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 332.0
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 326.6
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 326.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 326.3
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 322.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 318.7
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 316.6
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 315.4
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 314.7
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 314.6
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 313.9
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 311.9
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 311.1
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 307.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 305.5
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 296.7
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 296.6
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 295.8
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 295.7
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 295.6
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 294.7
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 290.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 290.3
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 289.1
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 284.4
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 282.4
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 279.5
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 276.6
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 273.8
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 273.5
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 270.7
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 259.9
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 257.7
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 256.9
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 256.5
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 256.3
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 252.1
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 246.0
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 244.0
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 202.2
Show allShow less
Brain - Cerebellum
Average nTPM: 342.9
Samples: 241

Max nTPM: 546.3
Min nTPM: 220.0
Std nTPM: 57.6
Median nTPM: 334.6
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 546.3
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 503.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 501.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 496.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 490.4
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 468.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 468.2
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 466.1
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 461.1
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 457.1
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 454.8
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 452.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 449.3
GTEX-1192X-3226-SM-5987D 50-59 years, male 448.6
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 445.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 439.2
GTEX-X261-3126-SM-4PQZC 50-59 years, male 433.1
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 431.8
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 428.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 426.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 423.8
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 422.2
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 420.7
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 414.8
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 414.7
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 413.5
GTEX-WL46-2826-SM-3LK81 50-59 years, male 412.2
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 412.0
GTEX-14E6D-2926-SM-664OP 50-59 years, male 411.8
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 408.6
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 406.7
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 405.6
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 405.1
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 403.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 403.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 402.7
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 400.4
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 397.7
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 396.0
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 395.8
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 393.0
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 391.6
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 391.0
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 389.2
GTEX-14ABY-3026-SM-664NE 50-59 years, male 387.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 387.5
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 386.1
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 385.7
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 385.5
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 384.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 384.0
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 384.0
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 383.4
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 382.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 382.4
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 382.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 381.8
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 379.5
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 377.8
GTEX-13112-2926-SM-5DUWT 50-59 years, male 377.5
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 377.2
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 376.1
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 376.1
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 376.0
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 374.9
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 374.7
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 373.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 372.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 371.9
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 371.2
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 371.1
GTEX-145LS-3026-SM-5O99S 60-69 years, female 370.5
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 370.3
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 370.3
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 369.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 368.5
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 367.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 363.8
GTEX-11NUK-3026-SM-5986K 50-59 years, male 363.7
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 363.5
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 363.4
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 362.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 361.8
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 361.6
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 361.6
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 361.5
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 360.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 360.5
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 360.0
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 359.9
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 359.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 359.8
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 358.2
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 357.5
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 356.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 355.9
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 353.4
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 353.1
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 352.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 352.6
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 349.7
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 349.4
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 348.0
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 347.7
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 347.3
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 347.2
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 346.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 346.0
GTEX-15G19-2826-SM-6M48K 60-69 years, male 345.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 345.1
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 344.7
GTEX-14PN4-3026-SM-664O4 50-59 years, male 344.5
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 342.8
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 341.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 340.3
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 340.2
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 338.1
GTEX-11EI6-2926-SM-5985U 60-69 years, male 337.8
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 337.2
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 336.3
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 334.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 334.5
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 333.8
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 333.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 332.9
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 331.5
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 331.1
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 330.9
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 330.2
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 330.1
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 329.9
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 329.8
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 329.7
GTEX-17EVP-2926-SM-793BU 40-49 years, male 328.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 328.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 328.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 328.3
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 327.8
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 327.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 327.0
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 326.9
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 326.9
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 325.9
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 325.6
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 324.6
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 324.2
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 323.9
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 323.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 322.6
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 322.2
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 322.2
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 322.1
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 320.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 320.2
GTEX-RU72-2926-SM-2TF66 50-59 years, female 318.8
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 318.3
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 318.2
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 317.7
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 317.6
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 317.3
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 317.2
GTEX-11ONC-3026-SM-5985W 60-69 years, male 316.5
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 316.4
GTEX-11DYG-2926-SM-5H132 60-69 years, male 315.6
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 315.6
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 315.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 314.4
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 313.8
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 313.5
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 311.4
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 310.6
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 310.2
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 309.3
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 307.7
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 306.7
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 305.6
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 304.6
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 303.5
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 302.8
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 302.7
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 302.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 301.8
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 301.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 301.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 299.9
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 299.8
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 299.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 298.5
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 298.4
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 298.3
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 297.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 295.9
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 295.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 294.9
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 293.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 293.7
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 292.5
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 292.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 292.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 292.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 291.8
GTEX-18465-2926-SM-7KFSE 50-59 years, male 291.1
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 289.3
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 288.5
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 288.4
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 287.5
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 287.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 286.1
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 285.4
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 285.3
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 285.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 284.0
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 282.8
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 278.1
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 277.9
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 277.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 274.9
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 272.0
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 269.4
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 269.3
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 266.1
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 265.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 262.3
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 262.0
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 257.5
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 256.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 255.1
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 254.1
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 254.0
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 252.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 251.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 246.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 245.9
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 243.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 243.1
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 239.1
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 230.5
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 227.5
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 224.9
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 222.2
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 220.0
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

220.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 220.3
FF:10083-102B2 22-68 years, mixed 283.6
FF:10166-103B4 76 years, female 157.0

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

541.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 541.5
Samples: 4

Max nTPM: 819.0
Min nTPM: 433.6
Sample A Female 819.0
Sample B Female 456.4
Sample C Male 433.6
Sample D Male 456.9

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