HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:478.9 nTPM
HPA Brain:1295.6 nTPM
GTEx:478.9 nTPM
FANTOM5:1144.6 Scaled Tags Per Million
Pig:790.9 nTPM
Mouse:2398.7 nTPM
Allen mouse:29.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004177Antibody CAB006252
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 1295.6
Sample id Sample description nTPM
Hippocampus
nTPM: 1032.1
1898 Male, age 80, left hemisphere 1450.7
1855 Male, age 76, left hemisphere 1107.9
2621 Female, age 67, right hemisphere 1037.8
2529 Female, age 94, left hemisphere 953.8
2148 Female, age 91, left hemisphere 883.8
1911 Female, age 85, right hemisphere 758.5
Dentate gyrus
nTPM: 1039.2
2530 Female, age 94, left hemisphere 1317.7
2010 Male, age 76, both hemispheres 1156.9
1927 Female, age 91, both hemispheres 1153.3
2528 Male, age 74, both hemispheres 971.4
2246 Female, age 85, both hemispheres 891.2
2531 Female, age 67, both hemispheres 744.7
Entorhinal gyrus
nTPM: 1037.6
2764 Male, age 80, right hemisphere 1437.1
2613 Female, age 94, left hemisphere 1147.1
1938 Female, age 85, left hemisphere 1055.8
1787 Male, age 76, left hemisphere 927.4
2117 Female, age 91, right hemisphere 846.0
2686 Male, age 75, right hemisphere 812.2
Hippocampus, CA1
nTPM: 1210.8
2749 Male, age 80, left hemisphere 1939.3
1873 Female, age 85, both hemispheres 1110.3
2527 Male, age 74, both hemispheres 1053.2
2045 Male, age 76, both hemispheres 983.7
2082 Female, age 91, right hemisphere 967.3
Hippocampus, CA2
nTPM: 1100.4
1963 Male, age 80, left hemisphere 1308.2
1892 Male, age 76, both hemispheres 1296.2
2249 Male, age 74, both hemispheres 1127.0
2437 Female, age 94, left hemisphere 1082.8
2113 Female, age 91, right hemisphere 910.0
1940 Female, age 85, left hemisphere 878.2
Hippocampus, CA3
nTPM: 1094.0
2436 Male, age 74, both hemispheres 1357.2
2137 Male, age 80, left hemisphere 1341.6
1867 Male, age 76, both hemispheres 1146.1
2620 Female, age 94, left hemisphere 1010.6
2861 Female, age 67, both hemispheres 893.0
1891 Female, age 85, both hemispheres 815.3
Parahippocampal cortex
nTPM: 1010.6
1850 Male, age 80, both hemispheres 1319.0
2245 Female, age 91, both hemispheres 1155.9
1933 Female, age 85, both hemispheres 1089.5
1990 Female, age 91, right hemisphere 1063.6
2532 Female, age 72, left hemisphere 1050.1
2250 Female, age 67, right hemisphere 1034.1
2018 Male, age 76, both hemispheres 955.8
2693 Female, age 94, both hemispheres 914.3
2622 Female, age 67, right hemisphere 815.8
2692 Male, age 74, both hemispheres 708.0
Perirhinal gyrus
nTPM: 1295.6
1847 Female, age 91, left hemisphere 1636.1
1794 Male, age 80, right hemisphere 1431.7
1841 Female, age 85, right hemisphere 1284.4
2521 Female, age 94, right hemisphere 1118.5
2848 Male, age 76, right hemisphere 1007.3
Subiculum
nTPM: 905.1
1977 Female, age 85, both hemispheres 1029.1
1901 Male, age 80, both hemispheres 1024.5
2619 Male, age 74, both hemispheres 939.8
2438 Female, age 94, left hemisphere 891.8
2042 Male, age 76, both hemispheres 793.9
2729 Female, age 91, right hemisphere 751.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 478.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 478.9
Samples: 197

Max nTPM: 934.3
Min nTPM: 205.7
Std nTPM: 157.8
Median nTPM: 449.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 934.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 919.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 853.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 838.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 832.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 823.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 823.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 815.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 796.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 776.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 775.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1144.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1144.6
FF:10169-103B7 60 years, female 1291.9
FF:10153-102I9 76 years, female 997.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 790.9
Pig sample Sample description nTPM
Subiculum
nTPM: 623.8
Samples: 4

Max nTPM: 794.8
Min nTPM: 545.0
Sample A Female 794.8
Sample B Female 545.0
Sample C Male 578.0
Sample D Male 577.5
Dorsal hippocampus
nTPM: 790.9
Samples: 4

Max nTPM: 1107.5
Min nTPM: 562.6
Sample A Female 1107.5
Sample B Female 756.7
Sample C Male 736.6
Sample D Male 562.6
Entorhinal cortex
nTPM: 663.0
Samples: 4

Max nTPM: 775.5
Min nTPM: 588.1
Sample A Female 775.5
Sample B Female 668.6
Sample C Male 619.7
Sample D Male 588.1
Ventral hippocampus
nTPM: 773.4
Samples: 4

Max nTPM: 959.3
Min nTPM: 494.9
Sample A Female 895.5
Sample B Female 494.9
Sample C Male 959.3
Sample D Male 744.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2398.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2103.1
Samples: 4

Max nTPM: 2240.6
Min nTPM: 1934.5
Sample A Male 1934.5
Sample B Male 2110.2
Sample C Female 2127.2
Sample D Female 2240.6
Hippocampal formation
nTPM: 2398.7
Samples: 4

Max nTPM: 2511.4
Min nTPM: 2262.1
Sample A Male 2423.3
Sample B Male 2262.1
Sample C Female 2511.4
Sample D Female 2398.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 29.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 29.1
77620804 Antisense, RP_070129_03_H04, Mouse strain C57BL/6J (56 days, male) 29.1

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