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TMEM219
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:194.5 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:21.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059185
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 194.5
Samples: 246

Max nTPM: 484.7
Min nTPM: 73.7
Std nTPM: 60.4
Median nTPM: 178.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 484.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 443.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 412.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 380.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 367.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 351.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 337.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 337.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 321.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 319.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 318.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 318.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 312.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 304.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 303.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 298.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 295.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 292.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 292.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 285.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 282.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 280.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 278.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 269.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 268.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 268.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 265.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 265.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 263.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 259.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 258.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 257.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 257.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 256.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 255.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 255.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 254.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 254.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 253.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 249.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 249.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 248.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 246.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 244.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 244.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 243.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 240.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 240.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 240.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 238.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 235.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 234.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 234.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 233.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 231.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 227.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 227.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 226.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 225.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 225.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 224.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 222.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 220.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 219.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 218.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 217.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 217.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 216.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 215.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 214.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 211.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 210.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 210.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 209.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 209.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 209.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 209.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 208.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 207.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 207.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 206.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 205.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 204.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 203.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 203.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 202.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 201.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 201.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 199.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 199.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 199.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 199.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 198.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 197.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 197.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 197.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 196.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 194.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 193.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 193.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 193.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 190.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 190.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 188.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 187.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 187.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 187.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 187.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 187.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 187.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 185.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 185.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 184.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 183.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 183.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 183.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 182.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 181.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 181.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 181.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 181.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 181.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 178.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 178.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 177.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 177.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 177.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 176.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 176.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 176.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 176.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 175.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 175.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 174.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 174.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 174.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 174.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 174.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 173.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 173.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 172.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 171.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 171.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 170.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 170.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 170.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 170.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 169.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 169.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 169.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 169.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 168.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 168.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 168.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 168.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 167.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 167.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 166.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 166.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 166.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 166.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 165.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 165.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 165.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 164.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 163.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 162.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 161.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 161.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 161.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 161.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 160.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 160.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 159.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 159.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 158.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 155.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 153.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 153.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 152.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 150.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 150.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 150.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 149.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 149.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 148.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 148.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 148.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 148.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 148.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 148.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 147.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 147.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 147.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 147.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 145.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 145.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 144.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 144.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 144.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 144.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 143.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 143.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 142.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 142.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 141.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 141.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 141.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 141.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 141.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 140.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 140.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 140.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 139.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 139.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 139.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 138.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 138.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 138.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 137.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 137.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 136.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 136.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 134.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 133.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 133.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 133.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 133.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 132.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 132.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 132.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 128.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 127.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 125.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 124.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 122.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 122.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 121.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 118.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 118.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 116.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 111.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 105.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 103.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 95.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 73.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 40.1
FF:10164-103B2 76 years, female 40.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.0
Pig sample Sample description nTPM
Caudate
nTPM: 21.0
Samples: 4

Max nTPM: 23.1
Min nTPM: 18.0
Sample A Female 20.4
Sample B Female 22.3
Sample C Male 23.1
Sample D Male 18.0

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