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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:97.4 nTPM
GTEx:97.4 nTPM
FANTOM5:59.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059185
Squamous epithelial cells Not detected


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 97.4
Samples: 156

Max nTPM: 214.0
Min nTPM: 53.1
Std nTPM: 21.4
Median nTPM: 94.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 214.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 178.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 149.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 144.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 141.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 140.2
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 139.9
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 136.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 130.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 129.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 128.8
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 126.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 124.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 124.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 124.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 122.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 121.9
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 119.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 118.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 117.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 115.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 115.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 115.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 115.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 114.6
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 114.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 114.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 114.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 113.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 112.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 111.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 111.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 110.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 110.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 109.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 109.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 109.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 108.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 108.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 106.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 106.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 106.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 105.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 105.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 105.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 105.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 104.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 103.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 103.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 103.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 103.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 103.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 102.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 102.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 102.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 101.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 100.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 100.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 100.1
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 100.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 99.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 99.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 99.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 98.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 98.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 98.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 98.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 98.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 97.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 97.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 97.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 97.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 96.9
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 96.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 96.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 96.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 94.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 94.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 94.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 94.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 94.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 94.2
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 94.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 93.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 93.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 93.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 93.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 93.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 93.1
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 93.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 93.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 93.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 92.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 92.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 91.8
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 91.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 90.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 90.1
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 89.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 88.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 88.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 88.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 88.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 88.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 88.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 88.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 86.5
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 86.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 85.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 85.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 85.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 85.1
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 84.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 84.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 84.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 83.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 83.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 82.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 82.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 82.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 81.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 81.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 81.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 81.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 81.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 80.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 80.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 80.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 80.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 79.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 79.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 79.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 79.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 78.6
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 78.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 78.2
GTEX-11I78-2026-SM-5987C 50-59 years, female 76.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 76.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 73.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 73.1
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 72.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 72.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 71.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 71.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 70.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 70.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 70.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 69.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 69.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 67.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 66.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 62.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 61.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 59.7
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 58.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 53.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

59.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 59.9
FF:10204-103F6 68 years, female 59.9

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