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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:128.9 nTPM
HPA Brain:615.7 nTPM
GTEx:128.9 nTPM
FANTOM5:665.9 Scaled Tags Per Million
Pig:67.4 nTPM
Mouse:67.4 nTPM
Allen mouse:4.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068771
Glial cells High
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

615.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 238.0
2288 Male, age 75, left hemisphere 377.8
2846 Female, age 79, unknown 278.3
1781 Male, age 74, unknown 243.4
1854 Male, age 80, left hemisphere 230.8
2481 Female, age 94, left hemisphere 230.8
2290 Female, age 72, unknown 205.8
2289 Male, age 61, right hemisphere 172.0
1857 Female, age 85, left hemisphere 165.0
Globus pallidus, externus
nTPM: 543.4
1996 Male, age 80, right hemisphere 682.6
2567 Female, age 72, unknown 585.5
2772 Female, age 79, unknown 525.9
2646 Male, age 61, right hemisphere 504.5
2395 Male, age 75, both hemispheres 418.6
Globus pallidus, internus
nTPM: 615.7
2111 Female, age 85, right hemisphere 756.6
2778 Female, age 91, both hemispheres 694.2
2287 Male, age 75, right hemisphere 623.8
2037 Male, age 80, right hemisphere 606.7
1818 Male, age 74, unknown 606.6
2566 Female, age 72, unknown 598.8
2483 Female, age 94, right hemisphere 423.4
Nucleus accumbens
nTPM: 297.0
2391 Female, age 94, left hemisphere 551.5
2698 Female, age 72, unknown 419.1
2286 Male, age 75, left hemisphere 323.4
2732 Male, age 80, right hemisphere 305.8
1806 Female, age 85, left hemisphere 246.6
1783 Male, age 74, unknown 209.3
2824 Male, age 61, right hemisphere 190.0
1856 Female, age 91, right hemisphere 130.0
Nucleus basalis of Meynert
nTPM: 301.2
2569 Male, age 61, both hemispheres 428.1
2821 Male, age 75, both hemispheres 291.7
2393 Male, age 80, right hemisphere 256.3
2484 Female, age 94, left hemisphere 228.7
Nucleus of the diagonal band
nTPM: 102.1
1812 Female, age 91, both hemispheres 153.6
2029 Male, age 61, right hemisphere 103.2
1979 Male, age 74, unknown 96.0
2775 Male, age 80, right hemisphere 79.7
2195 Female, age 85, both hemispheres 77.9
Putamen
nTPM: 273.6
1829 Male, age 74, unknown 369.0
2482 Female, age 94, left hemisphere 319.7
2489 Female, age 72, unknown 300.6
2647 Male, age 75, left hemisphere 291.2
1937 Female, age 91, right hemisphere 260.3
2466 Female, age 79, unknown 222.3
1838 Male, age 80, right hemisphere 152.2
Septal nuclei
nTPM: 157.7
2394 Male, age 61, left hemisphere 330.5
2199 Male, age 80, right hemisphere 178.3
2629 Female, age 94, right hemisphere 168.2
2059 Female, age 85, both hemispheres 127.2
2009 Female, age 91, both hemispheres 121.6
2031 Female, age 72, unknown 98.5
1960 Male, age 74, unknown 79.6
Stria terminalis, bed nucleus
nTPM: 139.2
1974 Female, age 91, both hemispheres 172.5
2201 Male, age 74, unknown 132.8
2486 Female, age 94, both hemispheres 112.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 90.4
Samples: 246

Max nTPM: 300.9
Min nTPM: 27.2
Std nTPM: 43.6
Median nTPM: 80.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 300.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 269.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 250.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 248.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 240.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 213.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 198.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 185.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 180.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 180.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 175.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 167.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 163.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 163.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 162.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 162.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 161.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 158.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 156.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 155.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 154.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 154.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 150.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 150.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 149.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 142.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 141.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 139.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 139.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 137.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 136.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 135.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 132.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 131.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 131.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 129.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 129.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 128.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 126.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 126.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 126.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 125.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 125.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 124.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 123.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 123.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 122.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 120.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 120.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 119.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 119.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 118.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 118.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 117.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 117.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 114.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 114.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 114.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 113.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 110.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 110.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 110.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 109.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 108.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 106.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 106.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 105.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 105.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 105.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 105.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 105.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 104.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 104.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 103.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 103.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 102.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 102.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 101.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 101.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 100.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 100.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 100.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 99.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 99.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 98.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 97.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 97.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 97.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 96.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 95.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 95.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 95.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 94.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 93.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 92.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 91.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 91.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 91.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 90.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 90.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 89.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 89.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 89.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 89.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 88.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 88.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 88.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 87.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 87.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 86.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 86.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 86.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 85.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 85.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 85.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 84.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 84.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 83.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 83.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 82.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 82.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 82.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 81.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 80.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 80.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 79.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 77.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 77.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 77.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 76.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 76.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 76.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 76.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 76.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 75.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 75.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 74.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 74.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 74.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 74.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 74.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 73.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 73.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 73.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 72.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 72.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 72.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 71.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 71.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 71.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 71.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 70.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 70.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 70.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 69.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 69.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 68.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 67.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 67.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 66.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 66.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 66.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 66.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 66.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 65.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 65.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 65.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 65.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 65.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 63.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 63.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 63.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 62.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 62.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 62.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 61.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 60.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 60.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 60.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 60.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 59.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 59.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 58.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 58.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 57.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 57.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 57.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 57.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 57.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 57.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 57.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 56.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 56.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 56.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 56.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 55.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 54.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 54.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 54.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 53.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 53.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 53.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 51.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 51.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 50.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 50.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 50.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 50.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 50.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 50.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 49.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 48.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 48.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 47.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 47.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 47.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 46.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 45.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 44.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 44.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 43.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 42.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 42.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 42.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 42.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 42.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 42.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 41.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 40.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 40.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 40.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 39.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 38.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 37.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 36.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 36.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 36.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 35.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 35.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 35.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 27.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 63.5
Samples: 246

Max nTPM: 434.5
Min nTPM: 15.2
Std nTPM: 43.9
Median nTPM: 50.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 434.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 272.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 210.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 179.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 177.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 170.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 169.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 167.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 166.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 163.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 162.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 160.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 139.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 136.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 134.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 131.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 130.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 130.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 126.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 115.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 114.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 113.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 111.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 111.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 110.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 110.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 110.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 109.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 107.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 106.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 103.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 102.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 101.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 100.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 100.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 98.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 93.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 91.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 91.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 90.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 90.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 90.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 89.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 86.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 85.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 82.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 82.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 81.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 81.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 80.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 79.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 78.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 77.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 77.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 77.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 77.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 75.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 75.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 75.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 75.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 74.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 73.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 72.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 72.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 72.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 72.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 71.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 71.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 71.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 71.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 69.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 69.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 69.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 68.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 68.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 68.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 68.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 68.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 67.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 66.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 66.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 66.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 66.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 65.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 64.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 63.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 63.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 62.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 62.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 61.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 61.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 61.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 60.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 58.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 58.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 58.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 57.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 57.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 57.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 56.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 56.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 56.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 56.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 56.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 56.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 56.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 55.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 55.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 55.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 55.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 54.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 54.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 54.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 53.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 53.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 53.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 53.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 53.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 52.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 52.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 52.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 52.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 50.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 50.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 50.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 50.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 50.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 49.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 49.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 49.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 48.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 48.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 48.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 47.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 47.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 47.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 47.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 46.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 46.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 46.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 46.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 45.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 45.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 45.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 45.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 45.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 44.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 44.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 44.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 44.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 43.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 43.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 42.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 42.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 42.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 42.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 42.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 42.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 41.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 41.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 41.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 41.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 40.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 40.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 40.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 40.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 39.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 39.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 39.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 39.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 39.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 39.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 38.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 38.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 38.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 37.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 37.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 37.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 37.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 37.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 37.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 36.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 36.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 36.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 36.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 36.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 36.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 36.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 36.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 36.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 36.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 36.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 36.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 35.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 35.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 34.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 34.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 34.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 34.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 34.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 34.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 33.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 33.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 33.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 32.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 32.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 32.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 32.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 32.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 31.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 31.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 31.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 31.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 31.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 30.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 30.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 30.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 30.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 30.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 30.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 29.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 29.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 29.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 29.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 29.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 28.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 28.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 27.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 27.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 27.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 27.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 27.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 26.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 26.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 25.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 25.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 24.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 23.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 21.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 21.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 20.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 19.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 15.2
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Brain - Putamen (basal ganglia)
Average nTPM: 128.9
Samples: 205

Max nTPM: 348.5
Min nTPM: 44.6
Std nTPM: 47.6
Median nTPM: 122.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 348.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 304.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 285.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 276.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 262.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 258.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 252.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 249.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 230.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 218.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 215.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 211.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 208.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 201.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 198.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 196.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 192.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 192.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 192.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 191.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 189.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 183.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 180.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 174.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 174.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 173.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 172.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 168.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 168.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 166.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 166.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 164.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 163.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 162.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 162.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 162.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 160.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 159.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 158.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 158.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 157.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 157.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 155.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 155.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 154.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 154.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 153.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 153.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 152.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 151.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 150.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 150.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 150.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 146.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 145.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 145.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 144.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 144.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 143.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 143.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 143.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 142.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 142.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 141.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 141.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 141.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 140.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 140.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 139.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 138.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 138.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 137.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 136.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 136.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 136.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 135.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 134.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 134.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 133.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 133.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 133.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 132.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 132.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 132.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 132.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 132.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 131.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 130.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 130.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 130.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 130.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 130.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 128.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 128.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 128.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 127.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 127.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 127.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 126.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 125.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 124.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 123.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 122.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 122.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 121.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 121.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 121.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 120.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 120.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 119.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 119.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 119.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 118.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 118.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 118.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 117.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 117.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 117.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 115.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 115.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 114.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 113.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 112.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 112.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 111.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 111.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 111.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 110.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 110.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 110.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 109.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 109.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 108.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 107.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 107.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 106.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 106.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 106.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 106.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 105.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 105.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 104.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 104.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 103.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 102.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 102.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 102.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 101.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 101.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 101.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 100.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 100.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 100.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 99.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 99.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 98.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 97.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 97.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 96.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 95.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 95.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 92.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 91.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 91.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 91.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 90.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 90.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 89.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 88.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 88.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 86.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 86.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 86.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 85.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 84.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 84.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 83.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 83.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 81.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 81.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 80.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 80.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 76.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 73.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 73.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 72.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 72.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 72.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 72.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 70.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 70.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 69.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 68.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 67.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 66.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 64.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 62.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 60.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 59.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 59.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 58.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 53.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 51.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 47.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 44.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

665.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 153.0
FF:10164-103B2 76 years, female 153.0
Nucleus accumbens
Scaled Tags Per Million: 259.6
FF:10037-101F1 23-56 years, mixed 259.6
Putamen
Scaled Tags Per Million: 163.9
FF:10176-103C5 60 years, female 163.9
Globus pallidus
Scaled Tags Per Million: 665.9
FF:10161-103A8 76 years, female 670.3
FF:10175-103C4 60 years, female 661.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.4
Pig sample Sample description nTPM
Caudate
nTPM: 22.7
Samples: 4

Max nTPM: 24.2
Min nTPM: 21.4
Sample A Female 24.2
Sample B Female 21.4
Sample C Male 22.7
Sample D Male 22.3
Putamen
nTPM: 67.5
Samples: 4

Max nTPM: 113.2
Min nTPM: 35.5
Sample A Female 113.2
Sample B Female 35.5
Sample C Male 50.4
Sample D Male 70.7
Septum
nTPM: 47.2
Samples: 4

Max nTPM: 57.6
Min nTPM: 34.6
Sample A Female 40.9
Sample B Female 34.6
Sample C Male 55.8
Sample D Male 57.6
Ventral pallidum
nTPM: 60.3
Samples: 4

Max nTPM: 88.9
Min nTPM: 22.2
Sample A Female 22.2
Sample B Female 51.4
Sample C Male 88.9
Sample D Male 78.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 67.4
Samples: 4

Max nTPM: 71.0
Min nTPM: 65.3
Sample A Male 65.3
Sample B Male 65.8
Sample C Female 71.0
Sample D Female 67.5
Septum
nTPM: 56.6
Samples: 4

Max nTPM: 66.0
Min nTPM: 47.1
Sample A Male 47.1
Sample B Male 52.0
Sample C Female 61.2
Sample D Female 66.0
Ventral forebrain
nTPM: 52.7
Samples: 4

Max nTPM: 54.7
Min nTPM: 50.8
Sample A Male 52.1
Sample B Male 50.8
Sample C Female 54.7
Sample D Female 53.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.4
75146004 Antisense, RP_060220_02_B10, Mouse strain C57BL/6J (56 days, male) 5.4
564654 Antisense, RP_040826_01_B12, Mouse strain C57BL/6J (56 days, male) 3.4
Pallidum
Expression energy: 4.1
75146004 Antisense, RP_060220_02_B10, Mouse strain C57BL/6J (56 days, male) 5.4
564654 Antisense, RP_040826_01_B12, Mouse strain C57BL/6J (56 days, male) 2.8

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