PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:504.7 nTPM
FANTOM5:413.0 Scaled Tags Per Million
Pig:144.4 nTPM
Mouse:120.0 nTPM
Allen mouse:6.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 504.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 364.3
2188 Female, age 91, both hemispheres 461.3
2090 Male, age 80, both hemispheres 399.5
2301 Female, age 85, both hemispheres 392.7
1984 Male, age 76, both hemispheres 203.7
Area postrema
nTPM: 331.4
2306 Male, age 80, both hemispheres 532.7
2799 Male, age 61, both hemispheres 237.7
2054 Male, age 76, both hemispheres 223.8
Dorsal cochlear nucleus
nTPM: 335.7
2378 Male, age 80, both hemispheres 397.1
2187 Female, age 91, both hemispheres 389.4
2802 Male, age 74, right hemisphere 322.3
2058 Male, age 76, both hemispheres 297.1
2370 Male, age 61, both hemispheres 272.7
Dorsal medullary reticular nucleus
nTPM: 347.2
2040 Female, age 85, both hemispheres 384.6
2373 Male, age 61, both hemispheres 330.9
2088 Male, age 76, both hemispheres 326.0
Dorsal motor vagal complex
nTPM: 248.2
2185 Male, age 76, both hemispheres 397.8
2643 Male, age 74, both hemispheres 271.5
2000 Male, age 74, unknown 258.2
2133 Female, age 91, both hemispheres 253.7
2807 Female, age 85, both hemispheres 246.5
2797 Male, age 61, both hemispheres 219.4
2813 Female, age 72, unknown 191.1
2844 Male, age 55, unknown 147.7
Dorsal tegmental nucleus
nTPM: 306.6
2083 Male, age 80, both hemispheres 404.6
2326 Male, age 74, both hemispheres 340.1
1936 Male, age 76, left hemisphere 259.4
2358 Male, age 61, both hemispheres 222.2
Dorsolateral tegmental area
nTPM: 326.8
2751 Female, age 85, both hemispheres 461.5
2654 Male, age 80, both hemispheres 408.2
2337 Male, age 61, both hemispheres 369.7
2360 Male, age 74, both hemispheres 223.9
2141 Male, age 76, both hemispheres 170.9
Gigantocellular reticular nuclei, medullary
nTPM: 411.3
2387 Female, age 91, both hemispheres 511.8
2314 Male, age 61, both hemispheres 508.0
1876 Female, age 85, both hemispheres 464.8
2022 Male, age 76, right hemisphere 399.6
2310 Male, age 80, both hemispheres 355.3
2462 Male, age 74, both hemispheres 228.2
Gigantocellular reticular nuclei, pars
nTPM: 332.3
2336 Male, age 61, both hemispheres 375.1
2706 Male, age 80, both hemispheres 362.4
2330 Male, age 80, both hemispheres 354.3
2084 Female, age 85, both hemispheres 294.5
2168 Male, age 76, both hemispheres 275.4
Inferior olive
nTPM: 356.8
2178 Male, age 61, both hemispheres 456.9
2628 Female, age 91, both hemispheres 390.2
2379 Male, age 80, both hemispheres 354.5
2563 Male, age 74, both hemispheres 297.9
2085 Female, age 85, both hemispheres 284.5
Kolliker-Fuse nucleus
nTPM: 354.7
2793 Female, age 91, left hemisphere 533.3
2163 Male, age 80, both hemispheres 326.7
2315 Male, age 76, right hemisphere 204.2
Lateral lemniscal nuclei
nTPM: 363.2
2320 Female, age 91, left hemisphere 477.5
2746 Female, age 85, left hemisphere 347.3
2036 Male, age 80, both hemispheres 337.3
2453 Male, age 74, right hemisphere 334.4
2169 Male, age 76, both hemispheres 319.3
Lateral medullary reticular nucleus
nTPM: 394.2
2852 Male, age 80, both hemispheres 470.8
2305 Male, age 74, both hemispheres 429.4
2374 Male, age 61, both hemispheres 421.9
2044 Male, age 76, both hemispheres 392.2
2190 Female, age 85, both hemispheres 358.9
2804 Female, age 91, both hemispheres 291.8
Lateral parabrachial nucleus
nTPM: 385.4
2792 Male, age 76, both hemispheres 575.1
2013 Male, age 80, both hemispheres 460.9
2139 Female, age 85, right hemisphere 266.1
2790 Male, age 61, both hemispheres 239.7
Lateral vestibular nucleus
nTPM: 337.1
2311 Male, age 80, both hemispheres 353.2
2184 Male, age 76, both hemispheres 321.0
Locus coeruleus
nTPM: 190.0
2720 Male, age 74, both hemispheres 253.8
2162 Male, age 80, both hemispheres 233.9
2317 Female, age 72, unknown 197.5
2788 Male, age 74, unknown 196.9
2014 Male, age 55, unknown 168.8
2123 Female, age 91, both hemispheres 163.5
1980 Male, age 76, both hemispheres 116.0
Medial olivary nucleus
nTPM: 504.7
1943 Male, age 61, both hemispheres 679.5
1962 Male, age 76, both hemispheres 486.3
2851 Male, age 80, both hemispheres 485.5
2138 Female, age 91, both hemispheres 367.6
Medial parabrachial nucleus
nTPM: 359.4
2854 Male, age 80, both hemispheres 434.3
2170 Female, age 91, both hemispheres 417.4
2786 Male, age 76, both hemispheres 352.9
2463 Female, age 85, right hemisphere 340.5
2156 Male, age 61, both hemispheres 251.7
Medial periolivary nuclei
nTPM: 327.8
2081 Male, age 80, both hemispheres 425.5
2458 Female, age 91, both hemispheres 386.4
2791 Male, age 74, right hemisphere 329.3
2063 Male, age 76, both hemispheres 287.5
2171 Female, age 85, both hemispheres 210.4
Medial vestibular nucleus
nTPM: 325.6
2803 Female, age 91, both hemispheres 473.2
2801 Male, age 74, both hemispheres 380.5
2093 Male, age 80, both hemispheres 364.0
2624 Male, age 61, both hemispheres 349.1
2743 Female, age 85, both hemispheres 218.8
2134 Male, age 76, both hemispheres 168.1
Motor facial nucleus
nTPM: 351.6
2697 Female, age 85, both hemispheres 441.3
2126 Male, age 61, both hemispheres 394.5
2365 Male, age 74, right hemisphere 365.6
2327 Male, age 80, both hemispheres 339.8
2795 Female, age 91, both hemispheres 318.7
2062 Male, age 76, both hemispheres 249.8
Motor hypoglossal nucleus
nTPM: 311.3
2182 Male, age 80, both hemispheres 417.0
2132 Female, age 85, both hemispheres 397.1
2125 Female, age 91, both hemispheres 395.2
2461 Male, age 61, both hemispheres 207.6
2277 Male, age 76, both hemispheres 139.6
Motor trigeminal nucleus
nTPM: 350.1
2560 Male, age 74, both hemispheres 391.8
2321 Female, age 91, both hemispheres 381.6
2309 Male, age 76, both hemispheres 349.7
2079 Male, age 80, both hemispheres 329.4
2335 Male, age 61, both hemispheres 297.9
Nuclei of the trapezoid body
nTPM: 303.1
2166 Male, age 80, both hemispheres 373.3
2368 Female, age 91, both hemispheres 354.8
2159 Male, age 61, both hemispheres 336.2
1983 Male, age 76, both hemispheres 271.7
2735 Female, age 85, both hemispheres 179.5
Nucleus ambiguus
nTPM: 351.7
2071 Male, age 76, both hemispheres 440.6
2096 Female, age 85, both hemispheres 262.8
Nucleus cuneatus
nTPM: 362.7
2380 Male, age 80, both hemispheres 495.1
2381 Male, age 80, both hemispheres 449.7
2808 Female, age 85, both hemispheres 421.1
2376 Male, age 61, both hemispheres 384.1
2100 Male, age 76, both hemispheres 378.6
2805 Female, age 91, both hemispheres 306.1
2131 Male, age 76, both hemispheres 304.8
2564 Male, age 74, both hemispheres 297.2
2562 Male, age 61, both hemispheres 227.7
Nucleus gracilis
nTPM: 448.4
2382 Male, age 80, both hemispheres 616.2
2299 Female, age 85, both hemispheres 371.8
2627 Male, age 74, both hemispheres 357.1
Nucleus raphe magnus
nTPM: 323.1
2459 Female, age 91, both hemispheres 478.3
2328 Male, age 80, both hemispheres 384.1
2051 Male, age 76, both hemispheres 364.4
2455 Male, age 74, both hemispheres 293.2
2160 Male, age 61, both hemispheres 231.1
2172 Female, age 85, both hemispheres 187.6
Nucleus raphe obscurus
nTPM: 485.5
2142 Male, age 76, midline 501.7
2845 Female, age 85, midline 501.6
2800 Male, age 61, midline 453.3
Nucleus raphe pallidus
nTPM: 451.0
1924 Male, age 61, midline 516.1
2145 Male, age 76, midline 474.2
2183 Male, age 80, midline 362.6
Nucleus tractus solitarii
nTPM: 188.9
2144 Female, age 91, right hemisphere 228.9
2656 Male, age 76, both hemispheres 193.5
2307 Male, age 80, both hemispheres 188.3
2191 Female, age 85, both hemispheres 144.9
Paramedian reticular nucleus
nTPM: 374.4
2052 Male, age 76, both hemispheres 463.8
2050 Female, age 85, both hemispheres 396.4
2057 Male, age 80, both hemispheres 355.2
2313 Male, age 61, both hemispheres 282.2
Parvicellular reticular nuclei
nTPM: 367.2
2095 Male, age 76, both hemispheres 423.3
2119 Male, age 80, both hemispheres 374.7
2558 Male, age 74, both hemispheres 303.8
Parvicellular reticular nuclei, medullary
nTPM: 310.0
2189 Female, age 91, both hemispheres 344.6
2091 Female, age 85, both hemispheres 303.3
2181 Male, age 80, left hemisphere 282.0
Pedunculopontine tegmental nucleus
nTPM: 310.8
2334 Male, age 80, both hemispheres 336.3
2338 Male, age 61, both hemispheres 320.3
1921 Female, age 85, both hemispheres 275.9
Peritrigeminal nucleus
nTPM: 328.3
2136 Male, age 76, both hemispheres 363.9
2179 Male, age 61, both hemispheres 328.8
2067 Female, age 85, both hemispheres 292.1
Pontine nuclei
nTPM: 382.3
2454 Male, age 74, left hemisphere 534.1
2319 Female, age 91, both hemispheres 483.0
2115 Male, age 80, left hemisphere 369.8
2109 Female, age 72, unknown 363.8
1863 Male, age 55, unknown 355.6
1968 Male, age 76, left hemisphere 354.3
2727 Male, age 61, right hemisphere 336.9
2787 Female, age 85, both hemispheres 260.7
Pontine raphe nucleus
nTPM: 271.7
2122 Female, age 85, midline 279.9
2853 Male, age 76, midline 263.4
Posteroventral cochlear nucleus
nTPM: 425.4
2341 Male, age 80, both hemispheres 562.8
2135 Female, age 91, both hemispheres 538.9
2070 Male, age 76, both hemispheres 398.7
2371 Male, age 61, both hemispheres 324.3
2752 Female, age 85, both hemispheres 302.1
Prepositus hypoglossal nucleus
nTPM: 279.9
2855 Female, age 85, right hemisphere 339.5
2086 Male, age 80, both hemispheres 220.4
Principal sensory trigeminal nucleus
nTPM: 340.1
2367 Female, age 91, left hemisphere 505.2
2008 Male, age 80, left hemisphere 308.4
2324 Male, age 76, both hemispheres 303.3
2158 Male, age 61, both hemispheres 243.8
Reticular pontine nucleus, caudal
nTPM: 399.8
2457 Female, age 91, both hemispheres 482.3
2559 Male, age 74, both hemispheres 417.1
2092 Male, age 76, both hemispheres 371.6
2332 Male, age 80, right hemisphere 328.1
Reticular pontine nucleus, oral
nTPM: 462.8
2361 Male, age 74, both hemispheres 551.7
2366 Female, age 91, both hemispheres 519.9
1939 Male, age 80, both hemispheres 436.8
2012 Female, age 85, both hemispheres 404.6
2167 Male, age 76, both hemispheres 401.2
Reticulotegmental nucleus
nTPM: 328.2
2322 Female, age 91, both hemispheres 392.4
2452 Male, age 74, both hemispheres 365.3
2333 Male, age 80, both hemispheres 346.2
2325 Male, age 76, both hemispheres 208.8
Spinal trigeminal nucleus, caudal
nTPM: 369.0
2312 Male, age 61, both hemispheres 485.4
2308 Male, age 80, both hemispheres 374.6
2390 Female, age 91, both hemispheres 343.0
2447 Male, age 76, both hemispheres 328.1
2642 Male, age 74, both hemispheres 314.0
Spinal trigeminal nucleus, interpolar
nTPM: 311.5
2389 Female, age 91, both hemispheres 365.0
2033 Male, age 80, both hemispheres 345.1
2386 Female, age 85, both hemispheres 335.3
2625 Male, age 61, both hemispheres 274.7
2066 Male, age 76, right hemisphere 237.5
Spinal trigeminal nucleus, oral
nTPM: 304.9
2164 Male, age 80, both hemispheres 350.9
1978 Male, age 76, both hemispheres 320.8
2737 Female, age 85, both hemispheres 243.0
Spinal vestibular nucleus
nTPM: 368.4
2748 Male, age 76, both hemispheres 440.9
2806 Female, age 85, both hemispheres 413.1
2384 Male, age 74, both hemispheres 383.6
2186 Female, age 91, both hemispheres 378.1
2780 Male, age 80, both hemispheres 302.1
2796 Male, age 61, both hemispheres 292.3
Subcoeruleus area
nTPM: 351.0
2369 Female, age 85, left hemisphere 569.3
1958 Male, age 80, both hemispheres 342.7
2089 Male, age 76, left hemisphere 316.4
2451 Male, age 74, both hemispheres 274.3
2323 Female, age 91, left hemisphere 252.2
Superior olive
nTPM: 382.7
2020 Male, age 76, both hemispheres 448.7
2329 Male, age 80, right hemisphere 405.4
2364 Male, age 74, right hemisphere 365.5
2561 Female, age 91, both hemispheres 352.0
1875 Female, age 85, both hemispheres 341.7
Superior vestibular nucleus
nTPM: 264.3
2015 Male, age 80, both hemispheres 329.6
2061 Male, age 76, both hemispheres 238.5
2383 Male, age 74, both hemispheres 224.7
Ventral medullary reticular nucleus
nTPM: 390.7
2060 Male, age 76, both hemispheres 397.2
2372 Male, age 61, both hemispheres 384.1
Ventral periolivary nuclei
nTPM: 320.6
2023 Male, age 76, both hemispheres 472.7
2165 Male, age 80, both hemispheres 289.4
2794 Female, age 91, left hemisphere 287.2
2130 Female, age 85, both hemispheres 232.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 358.4
2118 Male, age 80, both hemispheres 448.6
2180 Male, age 61, both hemispheres 393.3
1986 Male, age 76, both hemispheres 354.3
2302 Female, age 91, both hemispheres 302.4
2741 Female, age 85, both hemispheres 293.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 384.6
2456 Female, age 91, both hemispheres 451.8
2840 Female, age 85, both hemispheres 433.7
1959 Male, age 76, both hemispheres 390.4
2161 Male, age 80, both hemispheres 356.7
2359 Male, age 61, both hemispheres 346.0
2449 Male, age 74, both hemispheres 329.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 413.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 413.0
FF:10182-103D2 60 years, female 477.8
FF:10165-103B3 76 years, female 348.1
Medulla oblongata
Scaled Tags Per Million: 319.8
FF:10038-101F2 18-64 years, mixed 419.4
FF:10155-103A2 76 years, female 290.0
FF:10174-103C3 60 years, female 250.0
Pons
Scaled Tags Per Million: 354.5
FF:10033-101E6 18-54 years, mixed 354.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 144.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 144.4
Samples: 4

Max nTPM: 167.3
Min nTPM: 110.7
Sample A Female 167.3
Sample B Female 110.7
Sample C Male 140.9
Sample D Male 158.7
Pons
nTPM: 93.5
Samples: 4

Max nTPM: 135.4
Min nTPM: 69.5
Sample A Female 76.0
Sample B Female 69.5
Sample C Male 93.1
Sample D Male 135.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 120.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 120.0
Samples: 4

Max nTPM: 130.6
Min nTPM: 108.7
Sample A Male 108.7
Sample B Male 116.1
Sample C Female 124.5
Sample D Female 130.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.0
75146004 Antisense, RP_060220_02_B10, Mouse strain C57BL/6J (56 days, male) 8.7
564654 Antisense, RP_040826_01_B12, Mouse strain C57BL/6J (56 days, male) 3.4
Pons
Expression energy: 5.3
75146004 Antisense, RP_060220_02_B10, Mouse strain C57BL/6J (56 days, male) 8.3
564654 Antisense, RP_040826_01_B12, Mouse strain C57BL/6J (56 days, male) 2.3

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