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RPL30
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  • RPL30
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1046.9 nTPM
HPA Brain:594.3 nTPM
GTEx:1046.9 nTPM
FANTOM5:450.4 Scaled Tags Per Million
Pig:121.1 nTPM
Mouse:598.8 nTPM
Allen mouse:3.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002651
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

594.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 389.3
2846 Female, age 79, unknown 527.9
1857 Female, age 85, left hemisphere 432.3
1854 Male, age 80, left hemisphere 416.4
1781 Male, age 74, unknown 410.8
2290 Female, age 72, unknown 395.4
2288 Male, age 75, left hemisphere 341.4
2481 Female, age 94, left hemisphere 321.4
2289 Male, age 61, right hemisphere 269.0
Globus pallidus, externus
nTPM: 559.6
1996 Male, age 80, right hemisphere 768.3
2772 Female, age 79, unknown 687.7
2395 Male, age 75, both hemispheres 470.3
2646 Male, age 61, right hemisphere 462.0
2567 Female, age 72, unknown 409.6
Globus pallidus, internus
nTPM: 594.3
2287 Male, age 75, right hemisphere 686.8
2483 Female, age 94, right hemisphere 653.7
2037 Male, age 80, right hemisphere 653.0
2778 Female, age 91, both hemispheres 610.9
1818 Male, age 74, unknown 557.0
2566 Female, age 72, unknown 523.0
2111 Female, age 85, right hemisphere 476.0
Nucleus accumbens
nTPM: 420.3
2698 Female, age 72, unknown 620.5
2391 Female, age 94, left hemisphere 466.5
1806 Female, age 85, left hemisphere 428.9
1783 Male, age 74, unknown 420.4
2732 Male, age 80, right hemisphere 395.6
1856 Female, age 91, right hemisphere 386.8
2286 Male, age 75, left hemisphere 344.5
2824 Male, age 61, right hemisphere 299.4
Nucleus basalis of Meynert
nTPM: 428.4
2821 Male, age 75, both hemispheres 480.6
2569 Male, age 61, both hemispheres 480.1
2484 Female, age 94, left hemisphere 384.9
2393 Male, age 80, right hemisphere 367.9
Nucleus of the diagonal band
nTPM: 304.2
1812 Female, age 91, both hemispheres 378.0
1979 Male, age 74, unknown 341.0
2775 Male, age 80, right hemisphere 285.2
2195 Female, age 85, both hemispheres 275.9
2029 Male, age 61, right hemisphere 240.7
Putamen
nTPM: 367.7
2647 Male, age 75, left hemisphere 405.1
1937 Female, age 91, right hemisphere 401.4
2482 Female, age 94, left hemisphere 390.2
2466 Female, age 79, unknown 370.5
1829 Male, age 74, unknown 356.2
1838 Male, age 80, right hemisphere 346.0
2489 Female, age 72, unknown 304.7
Septal nuclei
nTPM: 331.9
2199 Male, age 80, right hemisphere 407.3
2394 Male, age 61, left hemisphere 349.8
2629 Female, age 94, right hemisphere 340.9
2031 Female, age 72, unknown 326.5
2009 Female, age 91, both hemispheres 315.8
2059 Female, age 85, both hemispheres 292.4
1960 Male, age 74, unknown 290.5
Stria terminalis, bed nucleus
nTPM: 259.6
1974 Female, age 91, both hemispheres 314.0
2201 Male, age 74, unknown 264.8
2486 Female, age 94, both hemispheres 200.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1046.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 905.4
Samples: 246

Max nTPM: 2318.1
Min nTPM: 383.9
Std nTPM: 266.5
Median nTPM: 845.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2318.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2073.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1744.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1726.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1695.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1644.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1617.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1612.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1524.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1495.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1487.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1430.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1392.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1380.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1376.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1352.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1349.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1329.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1287.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1282.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1271.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1252.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1230.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1229.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1181.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1177.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1176.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1174.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1173.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1164.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1158.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1153.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1145.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1139.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1133.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1128.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1128.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1118.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1117.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1112.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1106.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1101.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1100.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1098.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1093.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1091.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1088.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1084.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1084.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1079.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1060.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1058.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1055.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1055.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1049.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1045.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1045.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1044.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1042.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1040.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1039.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1036.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1032.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1030.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1028.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1028.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1028.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1026.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1023.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1017.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1002.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 999.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 992.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 992.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 987.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 984.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 974.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 972.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 971.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 970.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 970.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 965.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 963.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 959.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 954.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 949.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 946.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 940.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 935.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 933.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 932.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 931.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 929.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 924.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 922.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 920.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 919.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 918.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 898.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 893.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 886.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 885.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 881.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 880.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 878.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 875.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 873.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 870.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 869.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 865.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 865.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 863.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 855.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 855.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 853.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 851.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 850.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 849.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 848.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 847.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 847.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 846.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 845.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 845.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 845.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 845.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 841.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 833.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 832.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 830.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 826.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 826.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 826.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 824.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 823.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 822.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 821.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 821.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 821.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 817.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 815.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 811.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 809.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 807.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 807.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 807.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 805.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 805.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 797.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 796.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 795.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 795.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 795.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 794.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 792.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 790.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 788.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 788.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 788.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 783.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 780.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 779.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 778.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 775.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 775.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 769.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 767.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 762.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 762.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 760.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 755.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 754.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 754.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 751.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 747.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 747.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 747.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 747.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 742.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 741.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 740.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 740.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 740.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 740.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 738.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 735.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 734.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 731.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 729.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 728.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 723.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 714.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 708.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 704.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 699.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 698.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 693.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 689.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 686.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 682.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 679.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 678.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 678.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 675.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 675.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 674.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 674.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 671.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 669.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 666.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 666.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 666.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 665.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 662.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 654.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 650.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 649.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 648.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 643.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 641.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 637.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 636.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 633.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 632.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 631.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 620.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 618.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 617.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 613.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 606.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 605.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 599.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 596.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 595.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 594.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 589.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 577.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 575.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 571.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 561.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 560.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 554.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 549.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 522.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 492.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 383.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1046.9
Samples: 246

Max nTPM: 3266.0
Min nTPM: 485.6
Std nTPM: 389.7
Median nTPM: 965.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 3266.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2978.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 2831.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2739.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 2252.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 2151.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2012.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1924.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1814.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1795.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1766.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1753.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1716.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1713.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1657.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1642.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1607.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1603.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1593.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1586.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1586.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1571.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1568.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1537.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1530.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1519.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1504.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1450.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1440.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1412.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1375.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1356.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1354.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1341.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1320.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1320.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1300.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1300.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1291.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1279.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1278.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1278.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1272.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1257.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1233.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1228.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1226.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1211.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1209.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1205.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1189.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1185.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1181.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1177.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1176.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1176.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1173.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1173.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1171.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1168.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1163.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1159.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1157.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1157.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1157.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1154.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1153.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1150.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1147.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1142.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1139.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1136.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1129.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1128.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1127.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1127.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1125.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1122.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1121.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1115.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1113.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1105.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1098.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1094.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1091.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1083.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 1074.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1074.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1073.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 1071.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1069.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1066.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1065.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1057.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1053.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1051.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1049.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1048.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1046.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1045.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 1040.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 1039.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1038.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 1036.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1035.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 1031.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1009.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1006.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1006.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 1001.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 999.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 991.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 989.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 985.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 984.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 981.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 977.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 977.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 973.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 969.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 967.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 966.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 966.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 964.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 952.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 949.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 948.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 947.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 945.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 941.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 938.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 937.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 934.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 933.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 931.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 930.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 929.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 925.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 923.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 923.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 918.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 909.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 908.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 902.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 901.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 901.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 901.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 898.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 893.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 893.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 890.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 889.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 884.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 877.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 876.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 873.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 867.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 863.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 861.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 861.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 860.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 858.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 856.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 855.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 855.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 854.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 851.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 849.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 847.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 844.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 844.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 843.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 842.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 842.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 838.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 833.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 830.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 829.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 826.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 824.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 821.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 818.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 816.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 810.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 809.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 807.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 805.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 803.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 802.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 793.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 778.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 776.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 774.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 769.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 766.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 765.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 765.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 765.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 764.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 764.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 764.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 755.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 755.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 753.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 749.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 746.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 742.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 740.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 740.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 735.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 722.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 721.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 718.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 714.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 712.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 711.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 708.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 707.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 692.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 691.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 689.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 689.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 689.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 687.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 682.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 675.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 675.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 671.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 670.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 666.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 661.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 658.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 654.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 651.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 648.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 640.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 635.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 635.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 630.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 602.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 583.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 565.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 531.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 523.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 491.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 485.6
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Brain - Putamen (basal ganglia)
Average nTPM: 1008.4
Samples: 205

Max nTPM: 2853.1
Min nTPM: 533.3
Std nTPM: 325.9
Median nTPM: 932.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2853.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2321.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2258.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2043.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1982.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1786.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1646.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1632.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1607.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1577.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1574.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1556.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1555.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1537.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1526.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1493.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1484.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1476.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1465.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1454.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1449.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1443.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1411.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1398.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1394.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1377.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1375.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1364.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1349.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1337.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1336.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1323.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1302.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1266.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1266.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1236.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1234.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1232.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1228.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1200.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1197.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1197.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1161.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1151.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1139.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1132.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1128.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1111.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1108.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1107.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1105.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1102.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1096.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1094.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1082.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1078.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1076.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1076.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1072.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1068.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1066.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1065.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1048.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1046.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1042.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1041.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1037.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1035.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1034.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1026.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1025.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1023.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1020.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1018.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1014.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1012.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1008.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1005.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 999.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 999.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 998.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 995.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 995.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 993.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 992.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 987.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 982.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 978.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 976.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 976.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 970.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 964.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 954.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 953.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 952.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 952.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 941.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 940.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 939.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 938.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 937.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 937.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 932.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 926.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 926.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 926.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 925.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 922.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 918.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 918.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 916.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 915.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 913.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 913.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 906.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 905.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 905.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 905.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 897.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 889.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 886.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 881.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 881.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 878.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 875.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 873.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 871.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 869.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 863.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 862.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 862.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 856.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 855.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 851.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 850.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 847.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 845.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 843.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 841.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 840.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 833.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 830.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 826.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 824.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 823.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 822.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 818.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 818.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 815.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 811.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 809.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 809.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 808.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 802.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 799.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 795.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 794.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 794.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 792.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 783.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 779.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 776.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 773.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 773.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 771.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 767.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 766.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 764.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 764.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 756.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 753.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 753.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 746.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 739.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 738.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 738.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 732.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 730.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 720.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 718.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 717.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 712.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 707.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 707.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 706.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 700.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 698.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 693.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 681.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 673.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 664.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 662.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 659.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 646.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 644.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 639.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 636.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 624.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 604.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 603.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 600.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 578.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 576.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 569.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 533.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

450.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 297.3
FF:10164-103B2 76 years, female 297.3
Nucleus accumbens
Scaled Tags Per Million: 294.4
FF:10037-101F1 23-56 years, mixed 294.4
Putamen
Scaled Tags Per Million: 370.6
FF:10176-103C5 60 years, female 370.6
Globus pallidus
Scaled Tags Per Million: 450.4
FF:10175-103C4 60 years, female 492.8
FF:10161-103A8 76 years, female 408.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

121.1
Pig sample Sample description nTPM
Caudate
nTPM: 84.2
Samples: 4

Max nTPM: 93.8
Min nTPM: 69.5
Sample A Female 93.8
Sample B Female 93.2
Sample C Male 80.3
Sample D Male 69.5
Putamen
nTPM: 121.1
Samples: 4

Max nTPM: 149.6
Min nTPM: 95.6
Sample A Female 149.6
Sample B Female 95.6
Sample C Male 139.9
Sample D Male 99.3
Septum
nTPM: 105.4
Samples: 4

Max nTPM: 146.5
Min nTPM: 75.3
Sample A Female 146.5
Sample B Female 101.8
Sample C Male 98.1
Sample D Male 75.3
Ventral pallidum
nTPM: 94.5
Samples: 4

Max nTPM: 118.3
Min nTPM: 83.5
Sample A Female 84.9
Sample B Female 118.3
Sample C Male 83.5
Sample D Male 91.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

598.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 598.9
Samples: 4

Max nTPM: 613.2
Min nTPM: 587.1
Sample A Male 597.9
Sample B Male 613.2
Sample C Female 587.1
Sample D Female 597.2
Septum
nTPM: 590.7
Samples: 4

Max nTPM: 718.3
Min nTPM: 494.3
Sample A Male 494.3
Sample B Male 718.3
Sample C Female 612.8
Sample D Female 537.2
Ventral forebrain
nTPM: 475.8
Samples: 4

Max nTPM: 587.7
Min nTPM: 422.3
Sample A Male 428.1
Sample B Male 464.9
Sample C Female 587.7
Sample D Female 422.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.6
100143515 Antisense, RP_110407_01_E05, Mouse strain C57BL/6J (56 days, male) 2.6
Pallidum
Expression energy: 3.1
100143515 Antisense, RP_110407_01_E05, Mouse strain C57BL/6J (56 days, male) 3.1

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