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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:472.3 nTPM
HPA Brain:236.1 nTPM
GTEx:472.3 nTPM
FANTOM5:276.8 Scaled Tags Per Million
Pig:0.2 nTPM
Mouse:759.0 nTPM
Allen mouse:10.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045095Antibody HPA050165
Glial cells MediumMedium
Neuronal cells HighMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

236.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 196.8
2481 Female, age 94, left hemisphere 246.5
2290 Female, age 72, unknown 224.2
2846 Female, age 79, unknown 199.3
1781 Male, age 74, unknown 196.9
1857 Female, age 85, left hemisphere 188.1
2288 Male, age 75, left hemisphere 185.1
1854 Male, age 80, left hemisphere 183.6
2289 Male, age 61, right hemisphere 150.8
Globus pallidus, externus
nTPM: 223.0
2772 Female, age 79, unknown 298.2
1996 Male, age 80, right hemisphere 266.2
2646 Male, age 61, right hemisphere 206.3
2395 Male, age 75, both hemispheres 172.5
2567 Female, age 72, unknown 171.9
Globus pallidus, internus
nTPM: 236.1
2483 Female, age 94, right hemisphere 328.4
2287 Male, age 75, right hemisphere 315.2
2778 Female, age 91, both hemispheres 225.1
2111 Female, age 85, right hemisphere 213.3
1818 Male, age 74, unknown 200.1
2037 Male, age 80, right hemisphere 191.9
2566 Female, age 72, unknown 178.2
Nucleus accumbens
nTPM: 195.2
1783 Male, age 74, unknown 214.6
2286 Male, age 75, left hemisphere 208.2
1806 Female, age 85, left hemisphere 204.9
2391 Female, age 94, left hemisphere 202.5
2732 Male, age 80, right hemisphere 201.8
2698 Female, age 72, unknown 198.4
1856 Female, age 91, right hemisphere 184.0
2824 Male, age 61, right hemisphere 146.9
Nucleus basalis of Meynert
nTPM: 188.7
2484 Female, age 94, left hemisphere 214.8
2569 Male, age 61, both hemispheres 200.3
2821 Male, age 75, both hemispheres 190.2
2393 Male, age 80, right hemisphere 149.7
Nucleus of the diagonal band
nTPM: 167.6
1979 Male, age 74, unknown 200.8
2775 Male, age 80, right hemisphere 176.8
2195 Female, age 85, both hemispheres 173.0
1812 Female, age 91, both hemispheres 172.3
2029 Male, age 61, right hemisphere 115.1
Putamen
nTPM: 171.3
2482 Female, age 94, left hemisphere 233.1
2466 Female, age 79, unknown 198.3
1937 Female, age 91, right hemisphere 181.4
2489 Female, age 72, unknown 167.8
2647 Male, age 75, left hemisphere 161.6
1838 Male, age 80, right hemisphere 138.8
1829 Male, age 74, unknown 118.3
Septal nuclei
nTPM: 175.5
1960 Male, age 74, unknown 223.4
2199 Male, age 80, right hemisphere 204.4
2031 Female, age 72, unknown 189.6
2059 Female, age 85, both hemispheres 176.9
2009 Female, age 91, both hemispheres 157.2
2394 Male, age 61, left hemisphere 141.5
2629 Female, age 94, right hemisphere 135.8
Stria terminalis, bed nucleus
nTPM: 163.9
1974 Female, age 91, both hemispheres 192.4
2201 Male, age 74, unknown 157.1
2486 Female, age 94, both hemispheres 142.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

472.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 403.7
Samples: 246

Max nTPM: 1261.5
Min nTPM: 157.2
Std nTPM: 114.9
Median nTPM: 392.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1261.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 734.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 727.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 695.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 679.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 668.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 661.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 651.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 634.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 617.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 615.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 615.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 603.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 596.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 592.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 584.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 571.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 567.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 564.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 564.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 554.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 536.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 536.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 530.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 529.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 526.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 522.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 521.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 521.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 520.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 520.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 514.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 505.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 504.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 503.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 497.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 497.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 495.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 492.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 491.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 490.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 488.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 488.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 483.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 482.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 481.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 479.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 478.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 477.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 477.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 477.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 475.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 472.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 472.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 470.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 469.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 469.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 467.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 465.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 464.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 462.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 461.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 454.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 449.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 448.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 447.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 446.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 446.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 445.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 445.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 444.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 444.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 442.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 442.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 441.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 440.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 438.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 438.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 438.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 437.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 437.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 437.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 431.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 429.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 428.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 428.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 427.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 426.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 424.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 424.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 421.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 421.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 421.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 419.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 419.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 418.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 418.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 418.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 417.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 416.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 416.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 414.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 414.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 412.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 411.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 411.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 408.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 408.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 405.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 405.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 403.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 402.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 400.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 400.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 400.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 398.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 397.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 397.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 396.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 395.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 394.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 394.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 392.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 392.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 391.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 391.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 390.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 389.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 388.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 388.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 386.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 384.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 383.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 382.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 378.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 373.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 372.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 372.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 371.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 370.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 368.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 367.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 365.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 363.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 362.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 362.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 361.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 361.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 361.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 359.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 357.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 356.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 356.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 355.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 355.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 352.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 352.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 352.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 350.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 349.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 348.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 348.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 348.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 348.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 346.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 346.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 346.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 344.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 342.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 341.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 340.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 340.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 338.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 338.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 336.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 336.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 336.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 334.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 334.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 332.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 332.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 331.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 331.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 331.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 328.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 326.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 326.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 325.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 324.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 322.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 322.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 319.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 318.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 317.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 316.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 314.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 314.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 314.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 313.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 311.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 311.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 310.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 310.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 309.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 309.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 305.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 304.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 304.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 304.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 303.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 303.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 301.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 299.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 299.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 297.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 294.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 294.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 292.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 288.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 288.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 288.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 287.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 286.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 285.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 282.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 280.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 278.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 272.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 271.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 269.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 268.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 268.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 261.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 260.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 260.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 259.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 255.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 250.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 241.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 235.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 227.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 227.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 220.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 205.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 181.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 157.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 472.3
Samples: 246

Max nTPM: 1152.3
Min nTPM: 196.9
Std nTPM: 135.5
Median nTPM: 458.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1152.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1055.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 905.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 876.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 867.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 863.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 816.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 743.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 728.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 722.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 721.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 710.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 707.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 706.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 704.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 698.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 695.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 688.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 683.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 676.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 675.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 649.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 648.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 632.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 632.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 626.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 607.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 604.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 600.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 598.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 585.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 582.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 580.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 579.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 578.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 576.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 576.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 574.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 570.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 568.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 568.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 563.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 563.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 562.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 561.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 560.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 560.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 560.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 559.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 556.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 555.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 554.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 554.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 551.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 550.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 548.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 543.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 540.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 539.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 537.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 536.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 534.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 533.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 533.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 533.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 531.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 529.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 528.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 527.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 526.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 523.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 523.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 522.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 521.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 519.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 516.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 516.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 515.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 515.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 514.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 514.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 513.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 509.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 506.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 506.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 505.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 504.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 503.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 502.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 502.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 499.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 497.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 496.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 495.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 494.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 494.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 493.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 491.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 490.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 487.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 487.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 486.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 485.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 482.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 481.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 481.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 481.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 480.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 480.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 479.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 475.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 474.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 473.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 468.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 467.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 467.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 467.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 466.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 464.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 461.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 460.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 458.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 458.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 458.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 458.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 456.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 454.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 454.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 453.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 453.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 451.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 451.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 451.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 451.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 449.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 448.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 445.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 444.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 442.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 438.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 433.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 433.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 431.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 430.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 428.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 428.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 428.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 426.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 426.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 426.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 425.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 425.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 425.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 424.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 423.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 423.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 422.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 421.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 419.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 418.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 417.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 414.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 414.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 412.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 412.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 411.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 411.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 410.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 408.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 407.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 405.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 403.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 401.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 401.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 399.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 394.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 394.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 393.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 393.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 393.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 390.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 388.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 388.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 384.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 382.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 382.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 375.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 374.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 372.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 372.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 371.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 365.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 364.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 363.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 363.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 360.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 358.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 356.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 356.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 355.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 354.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 353.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 351.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 350.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 349.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 346.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 343.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 343.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 343.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 342.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 341.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 336.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 336.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 335.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 332.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 331.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 328.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 328.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 326.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 324.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 324.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 323.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 321.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 319.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 317.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 314.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 314.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 309.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 303.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 301.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 298.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 296.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 296.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 294.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 292.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 283.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 273.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 273.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 271.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 264.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 255.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 253.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 249.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 224.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 223.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 196.9
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Brain - Putamen (basal ganglia)
Average nTPM: 437.4
Samples: 205

Max nTPM: 954.9
Min nTPM: 207.3
Std nTPM: 111.8
Median nTPM: 420.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 954.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 849.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 781.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 742.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 742.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 695.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 688.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 688.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 675.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 651.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 637.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 627.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 618.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 617.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 602.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 599.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 596.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 594.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 594.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 594.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 580.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 580.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 573.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 570.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 570.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 568.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 565.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 558.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 544.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 542.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 539.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 530.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 529.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 528.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 528.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 526.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 524.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 522.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 521.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 511.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 508.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 507.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 505.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 504.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 503.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 502.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 501.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 498.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 493.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 492.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 490.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 488.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 487.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 481.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 477.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 475.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 473.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 472.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 469.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 469.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 464.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 463.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 463.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 461.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 461.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 458.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 457.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 457.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 457.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 456.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 454.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 451.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 450.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 450.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 449.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 448.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 445.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 443.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 443.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 442.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 439.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 437.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 437.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 436.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 436.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 435.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 434.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 433.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 433.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 430.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 430.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 429.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 429.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 428.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 426.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 425.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 425.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 424.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 423.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 421.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 421.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 421.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 420.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 419.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 419.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 418.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 417.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 415.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 415.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 415.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 415.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 414.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 413.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 413.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 413.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 411.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 411.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 409.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 408.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 407.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 407.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 407.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 406.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 406.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 406.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 405.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 403.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 401.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 400.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 400.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 397.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 393.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 392.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 391.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 390.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 389.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 389.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 389.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 388.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 387.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 387.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 387.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 386.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 384.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 381.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 380.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 380.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 377.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 377.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 377.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 376.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 372.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 372.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 369.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 369.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 368.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 365.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 364.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 360.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 359.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 358.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 358.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 352.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 352.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 349.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 346.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 343.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 342.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 338.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 338.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 336.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 335.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 335.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 334.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 332.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 330.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 330.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 328.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 328.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 326.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 326.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 324.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 322.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 320.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 318.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 317.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 317.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 316.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 310.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 306.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 306.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 293.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 293.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 291.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 289.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 288.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 286.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 278.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 269.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 268.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 243.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 220.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 217.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 214.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 207.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

276.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 148.2
FF:10164-103B2 76 years, female 148.2
Nucleus accumbens
Scaled Tags Per Million: 165.1
FF:10037-101F1 23-56 years, mixed 165.1
Putamen
Scaled Tags Per Million: 153.8
FF:10176-103C5 60 years, female 153.8
Globus pallidus
Scaled Tags Per Million: 276.8
FF:10175-103C4 60 years, female 408.0
FF:10161-103A8 76 years, female 145.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.2
Pig sample Sample description nTPM
Caudate
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.1
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.4
Putamen
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.1
Sample C Male 0.0
Sample D Male 0.0
Septum
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.2
Sample B Female 0.1
Sample C Male 0.0
Sample D Male 0.0
Ventral pallidum
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.2
Sample B Female 0.1
Sample C Male 0.0
Sample D Male 0.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

759.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 608.1
Samples: 4

Max nTPM: 698.7
Min nTPM: 523.3
Sample A Male 594.3
Sample B Male 698.7
Sample C Female 523.3
Sample D Female 616.1
Septum
nTPM: 759.0
Samples: 4

Max nTPM: 867.7
Min nTPM: 643.0
Sample A Male 706.6
Sample B Male 867.7
Sample C Female 818.6
Sample D Female 643.0
Ventral forebrain
nTPM: 627.6
Samples: 4

Max nTPM: 767.6
Min nTPM: 561.7
Sample A Male 576.8
Sample B Male 604.4
Sample C Female 767.6
Sample D Female 561.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.4
69818338 Antisense, RP_050510_04_H06, Mouse strain C57BL/6J (56 days, male) 10.0
74749928 Antisense, RP_060220_04_F02, Mouse strain C57BL/6J (56 days, male) 8.8
Pallidum
Expression energy: 10.9
69818338 Antisense, RP_050510_04_H06, Mouse strain C57BL/6J (56 days, male) 10.9
74749928 Antisense, RP_060220_04_F02, Mouse strain C57BL/6J (56 days, male) 10.9

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