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S100A11
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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1717.2 nTPM
GTEx:1717.2 nTPM
FANTOM5:767.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042745Antibody CAB034320
Squamous epithelial cells HighMedium




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1717.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1717.2
Samples: 156

Max nTPM: 5286.7
Min nTPM: 247.2
Std nTPM: 1213.0
Median nTPM: 1619.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 5286.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 4808.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 4397.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 4367.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 4366.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 4255.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 3987.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 3971.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 3944.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 3931.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 3872.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 3785.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 3719.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 3592.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 3585.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 3579.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 3549.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 3506.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 3476.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 3438.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 3385.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 3251.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 3212.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 3015.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2993.1
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 2989.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2894.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 2846.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2790.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2769.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 2722.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2692.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 2667.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 2666.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 2609.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 2544.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 2460.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 2446.9
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 2444.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 2430.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 2414.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 2413.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2400.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 2387.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 2363.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 2356.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2302.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 2265.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 2242.4
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2226.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 2196.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2188.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 2172.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2167.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 2160.5
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 2158.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 2082.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2069.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2060.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 2032.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2002.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1979.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1977.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1975.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1964.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1962.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1939.8
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1931.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1919.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1913.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 1913.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1854.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1824.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1821.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1792.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1773.1
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1691.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1686.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1552.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1483.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1444.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1427.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1397.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1389.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1362.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1359.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1284.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1202.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1202.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1202.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1201.3
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1173.2
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1151.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1122.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1030.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1025.1
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 934.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 915.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 914.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 898.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 891.0
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 828.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 813.8
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 809.7
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 766.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 763.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 757.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 752.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 727.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 682.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 646.3
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 645.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 637.2
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 612.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 607.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 589.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 581.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 547.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 547.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 546.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 521.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 501.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 496.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 488.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 487.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 454.8
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 434.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 433.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 431.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 418.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 399.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 398.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 394.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 388.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 386.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 379.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 377.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 363.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 358.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 358.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 356.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 353.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 352.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 342.8
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 340.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 337.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 335.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 334.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 333.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 332.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 327.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 310.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 283.1
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 279.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 275.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 247.2
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

767.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 767.0
FF:10204-103F6 68 years, female 767.0

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