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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:181.6 nTPM
GTEx:181.6 nTPM
FANTOM5:143.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB018702Antibody CAB069993
Squamous epithelial cells LowMedium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

181.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 181.6
Samples: 156

Max nTPM: 563.0
Min nTPM: 45.7
Std nTPM: 96.2
Median nTPM: 158.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 563.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 489.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 457.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 403.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 385.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 374.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 355.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 348.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 348.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 340.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 338.7
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 337.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 326.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 322.9
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 322.9
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 315.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 312.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 308.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 304.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 303.0
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 302.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 299.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 291.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 282.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 281.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 280.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 273.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 272.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 269.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 267.5
GTEX-QCQG-1226-SM-48U23 50-59 years, female 265.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 265.0
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 256.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 249.9
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 248.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 242.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 238.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 236.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 236.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 235.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 234.4
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 231.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 227.8
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 226.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 224.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 223.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 221.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 221.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 216.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 215.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 215.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 215.5
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 214.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 214.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 213.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 212.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 210.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 210.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 206.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 206.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 201.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 200.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 196.0
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 193.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 191.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 188.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 183.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 177.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 174.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 173.8
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 172.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 171.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 170.5
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 164.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 161.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 161.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 160.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 159.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 158.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 158.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 156.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 153.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 152.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 148.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 148.6
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 147.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 147.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 145.6
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 142.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 141.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 139.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 139.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 139.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 137.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 136.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 130.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 129.1
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 128.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 128.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 126.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 125.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 124.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 124.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 121.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 116.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 116.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 116.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 114.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 114.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 112.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 111.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 110.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 109.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 109.2
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 108.9
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 108.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 107.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 102.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 100.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 100.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 99.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 99.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 97.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 97.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 97.5
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 95.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 94.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 91.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 90.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 90.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 89.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 88.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 84.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 84.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 83.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 82.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 81.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 80.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 80.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 73.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 73.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 72.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 71.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 70.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 70.1
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 69.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 68.7
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 67.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 67.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 66.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 64.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 62.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 60.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 56.5
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 54.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 45.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

143.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 143.0
FF:10204-103F6 68 years, female 143.0

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