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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:572.8 nTPM
HPA Brain:325.6 nTPM
GTEx:572.8 nTPM
FANTOM5:793.9 Scaled Tags Per Million
Pig:255.6 nTPM
Mouse:446.2 nTPM
Allen mouse:14.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018886
Glial cells Medium
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

325.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 262.4
2481 Female, age 94, left hemisphere 310.5
1857 Female, age 85, left hemisphere 290.8
2288 Male, age 75, left hemisphere 276.6
2846 Female, age 79, unknown 274.2
2290 Female, age 72, unknown 265.4
1854 Male, age 80, left hemisphere 255.4
1781 Male, age 74, unknown 240.7
2289 Male, age 61, right hemisphere 185.7
Globus pallidus, externus
nTPM: 193.3
2395 Male, age 75, both hemispheres 233.8
2772 Female, age 79, unknown 215.1
2646 Male, age 61, right hemisphere 190.9
1996 Male, age 80, right hemisphere 184.9
2567 Female, age 72, unknown 142.1
Globus pallidus, internus
nTPM: 202.1
2483 Female, age 94, right hemisphere 290.8
2287 Male, age 75, right hemisphere 261.0
1818 Male, age 74, unknown 218.8
2037 Male, age 80, right hemisphere 185.8
2778 Female, age 91, both hemispheres 165.3
2566 Female, age 72, unknown 165.2
2111 Female, age 85, right hemisphere 128.0
Nucleus accumbens
nTPM: 286.2
1856 Female, age 91, right hemisphere 371.7
2698 Female, age 72, unknown 313.4
2286 Male, age 75, left hemisphere 299.7
1806 Female, age 85, left hemisphere 288.0
2824 Male, age 61, right hemisphere 282.8
1783 Male, age 74, unknown 280.2
2391 Female, age 94, left hemisphere 273.5
2732 Male, age 80, right hemisphere 180.5
Nucleus basalis of Meynert
nTPM: 223.9
2821 Male, age 75, both hemispheres 262.7
2393 Male, age 80, right hemisphere 225.1
2484 Female, age 94, left hemisphere 213.3
2569 Male, age 61, both hemispheres 194.4
Nucleus of the diagonal band
nTPM: 325.6
1812 Female, age 91, both hemispheres 375.9
2195 Female, age 85, both hemispheres 333.6
2775 Male, age 80, right hemisphere 329.6
1979 Male, age 74, unknown 319.1
2029 Male, age 61, right hemisphere 269.6
Putamen
nTPM: 240.0
1838 Male, age 80, right hemisphere 292.9
1937 Female, age 91, right hemisphere 290.8
2482 Female, age 94, left hemisphere 281.7
1829 Male, age 74, unknown 231.4
2466 Female, age 79, unknown 221.2
2647 Male, age 75, left hemisphere 202.2
2489 Female, age 72, unknown 160.0
Septal nuclei
nTPM: 291.6
1960 Male, age 74, unknown 363.7
2031 Female, age 72, unknown 343.5
2009 Female, age 91, both hemispheres 314.8
2629 Female, age 94, right hemisphere 289.3
2059 Female, age 85, both hemispheres 271.5
2199 Male, age 80, right hemisphere 238.2
2394 Male, age 61, left hemisphere 220.1
Stria terminalis, bed nucleus
nTPM: 300.6
1974 Female, age 91, both hemispheres 341.2
2201 Male, age 74, unknown 297.4
2486 Female, age 94, both hemispheres 263.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

572.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 442.9
Samples: 246

Max nTPM: 1174.0
Min nTPM: 202.8
Std nTPM: 132.8
Median nTPM: 425.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1174.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 884.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 847.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 834.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 832.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 826.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 756.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 724.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 718.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 712.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 691.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 687.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 676.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 663.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 660.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 658.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 652.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 648.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 643.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 638.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 637.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 634.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 629.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 622.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 622.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 614.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 612.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 610.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 606.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 602.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 572.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 563.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 561.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 561.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 556.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 553.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 551.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 551.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 550.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 548.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 546.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 544.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 542.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 541.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 539.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 538.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 531.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 530.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 530.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 530.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 529.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 528.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 526.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 525.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 522.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 518.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 517.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 516.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 516.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 516.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 515.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 512.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 508.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 506.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 505.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 504.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 496.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 491.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 488.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 484.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 483.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 482.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 482.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 482.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 481.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 481.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 481.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 481.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 476.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 476.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 476.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 471.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 471.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 470.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 467.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 465.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 463.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 463.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 460.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 459.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 459.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 459.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 458.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 456.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 455.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 453.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 452.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 451.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 451.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 449.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 448.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 447.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 447.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 446.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 445.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 445.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 443.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 442.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 442.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 441.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 440.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 437.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 437.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 436.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 436.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 434.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 434.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 431.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 431.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 431.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 431.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 429.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 426.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 424.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 423.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 423.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 422.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 420.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 420.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 417.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 415.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 415.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 414.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 412.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 410.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 409.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 407.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 406.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 405.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 403.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 403.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 402.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 402.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 402.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 401.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 401.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 400.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 400.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 397.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 395.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 394.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 394.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 390.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 388.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 385.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 384.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 384.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 383.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 379.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 376.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 375.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 375.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 375.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 374.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 374.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 373.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 372.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 372.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 372.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 372.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 370.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 370.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 370.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 369.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 369.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 368.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 368.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 368.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 366.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 366.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 366.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 365.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 364.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 362.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 360.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 357.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 355.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 354.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 353.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 352.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 351.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 351.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 351.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 345.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 343.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 342.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 341.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 339.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 338.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 338.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 337.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 335.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 334.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 333.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 332.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 332.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 332.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 329.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 326.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 324.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 323.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 319.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 317.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 312.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 307.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 306.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 304.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 304.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 301.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 297.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 296.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 291.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 289.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 288.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 286.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 285.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 282.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 276.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 273.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 271.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 271.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 269.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 265.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 264.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 260.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 258.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 256.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 253.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 246.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 231.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 227.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 225.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 224.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 223.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 213.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 202.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 572.8
Samples: 246

Max nTPM: 996.4
Min nTPM: 222.1
Std nTPM: 153.7
Median nTPM: 564.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 996.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 986.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 939.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 927.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 921.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 915.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 874.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 845.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 839.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 838.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 835.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 832.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 831.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 829.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 825.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 820.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 815.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 808.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 800.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 798.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 795.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 795.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 786.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 785.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 777.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 777.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 774.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 773.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 769.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 769.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 768.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 767.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 766.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 761.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 760.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 751.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 750.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 749.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 737.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 731.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 726.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 723.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 723.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 718.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 717.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 717.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 716.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 708.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 703.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 702.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 695.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 694.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 687.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 687.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 686.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 683.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 683.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 679.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 679.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 679.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 679.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 673.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 669.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 667.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 666.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 660.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 659.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 659.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 657.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 657.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 657.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 654.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 654.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 654.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 651.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 651.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 649.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 649.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 646.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 646.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 644.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 644.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 642.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 640.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 639.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 637.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 637.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 637.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 634.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 633.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 632.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 627.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 627.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 623.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 617.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 617.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 616.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 615.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 607.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 603.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 595.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 589.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 587.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 586.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 586.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 586.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 585.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 581.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 581.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 580.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 580.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 580.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 577.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 577.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 575.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 573.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 571.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 569.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 566.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 566.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 566.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 566.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 565.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 563.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 561.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 560.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 558.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 558.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 556.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 555.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 554.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 553.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 553.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 552.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 551.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 551.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 549.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 538.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 536.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 536.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 534.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 534.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 534.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 532.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 531.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 529.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 528.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 528.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 527.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 526.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 526.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 521.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 520.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 518.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 517.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 517.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 516.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 516.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 513.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 512.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 503.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 502.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 501.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 501.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 498.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 498.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 495.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 493.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 493.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 491.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 488.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 488.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 484.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 484.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 483.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 481.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 479.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 477.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 476.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 475.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 473.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 470.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 470.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 470.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 463.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 463.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 461.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 458.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 453.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 453.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 451.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 445.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 444.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 443.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 438.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 433.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 433.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 433.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 432.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 431.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 431.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 429.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 428.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 426.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 423.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 421.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 420.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 418.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 415.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 413.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 410.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 408.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 407.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 398.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 396.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 394.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 389.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 387.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 381.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 380.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 377.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 377.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 377.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 375.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 350.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 349.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 349.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 342.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 342.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 340.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 336.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 329.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 323.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 318.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 316.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 314.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 306.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 305.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 296.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 296.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 295.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 282.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 280.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 263.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 254.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 222.1
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Brain - Putamen (basal ganglia)
Average nTPM: 447.3
Samples: 205

Max nTPM: 787.6
Min nTPM: 232.4
Std nTPM: 113.8
Median nTPM: 433.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 787.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 779.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 774.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 751.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 746.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 721.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 718.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 704.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 669.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 666.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 664.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 639.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 634.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 632.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 632.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 625.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 615.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 601.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 594.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 593.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 590.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 589.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 587.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 585.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 580.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 578.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 578.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 571.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 563.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 562.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 558.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 557.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 557.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 555.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 553.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 551.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 550.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 545.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 545.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 543.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 543.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 543.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 537.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 535.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 534.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 533.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 527.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 527.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 526.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 524.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 523.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 521.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 521.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 518.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 516.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 516.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 512.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 511.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 510.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 509.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 509.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 500.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 499.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 497.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 493.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 493.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 493.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 490.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 485.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 482.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 481.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 474.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 473.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 473.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 473.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 469.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 469.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 468.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 463.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 462.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 462.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 461.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 457.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 452.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 451.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 451.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 450.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 446.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 443.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 442.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 442.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 441.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 440.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 440.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 440.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 439.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 438.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 438.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 437.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 436.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 436.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 434.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 433.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 432.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 430.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 430.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 428.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 427.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 427.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 425.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 424.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 420.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 417.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 417.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 417.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 415.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 415.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 413.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 413.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 413.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 412.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 410.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 408.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 407.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 405.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 404.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 403.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 402.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 399.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 397.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 395.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 394.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 394.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 393.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 391.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 391.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 389.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 388.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 388.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 387.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 381.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 379.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 376.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 375.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 374.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 370.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 370.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 370.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 369.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 367.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 366.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 366.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 362.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 360.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 359.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 359.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 357.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 355.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 355.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 354.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 352.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 351.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 351.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 350.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 349.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 348.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 348.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 346.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 345.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 341.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 339.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 339.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 335.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 333.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 333.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 333.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 333.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 329.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 329.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 327.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 324.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 322.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 318.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 317.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 313.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 307.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 306.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 306.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 303.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 297.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 296.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 295.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 291.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 290.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 283.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 277.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 275.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 273.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 272.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 267.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 252.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 251.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 250.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 242.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 232.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

793.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 669.7
FF:10164-103B2 76 years, female 669.7
Nucleus accumbens
Scaled Tags Per Million: 386.7
FF:10037-101F1 23-56 years, mixed 386.7
Putamen
Scaled Tags Per Million: 793.9
FF:10176-103C5 60 years, female 793.9
Globus pallidus
Scaled Tags Per Million: 366.6
FF:10175-103C4 60 years, female 442.6
FF:10161-103A8 76 years, female 290.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

255.6
Pig sample Sample description nTPM
Caudate
nTPM: 249.0
Samples: 4

Max nTPM: 290.3
Min nTPM: 214.2
Sample A Female 245.9
Sample B Female 245.4
Sample C Male 290.3
Sample D Male 214.2
Putamen
nTPM: 247.1
Samples: 4

Max nTPM: 343.6
Min nTPM: 174.3
Sample A Female 174.3
Sample B Female 223.2
Sample C Male 343.6
Sample D Male 247.3
Septum
nTPM: 255.6
Samples: 4

Max nTPM: 294.4
Min nTPM: 218.0
Sample A Female 280.8
Sample B Female 229.1
Sample C Male 294.4
Sample D Male 218.0
Ventral pallidum
nTPM: 217.7
Samples: 4

Max nTPM: 274.6
Min nTPM: 188.7
Sample A Female 274.6
Sample B Female 217.4
Sample C Male 190.1
Sample D Male 188.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

446.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 371.1
Samples: 4

Max nTPM: 387.1
Min nTPM: 358.8
Sample A Male 362.3
Sample B Male 387.1
Sample C Female 376.1
Sample D Female 358.8
Septum
nTPM: 446.2
Samples: 4

Max nTPM: 467.8
Min nTPM: 437.7
Sample A Male 437.7
Sample B Male 467.8
Sample C Female 439.3
Sample D Female 440.0
Ventral forebrain
nTPM: 402.7
Samples: 4

Max nTPM: 435.3
Min nTPM: 379.7
Sample A Male 383.0
Sample B Male 412.8
Sample C Female 435.3
Sample D Female 379.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.6
1786 Antisense, RP_040526_02_H04, Mouse strain C57BL/6J (56 days, male) 11.6
1787 Antisense, RP_040526_02_H04, Mouse strain C57BL/6J (56 days, male) 6.0
Pallidum
Expression energy: 14.5
1786 Antisense, RP_040526_02_H04, Mouse strain C57BL/6J (56 days, male) 14.5
1787 Antisense, RP_040526_02_H04, Mouse strain C57BL/6J (56 days, male) 8.6

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