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  • TSC22D4
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:693.6 nTPM
HPA Brain:857.6 nTPM
GTEx:693.6 nTPM
FANTOM5:657.1 Scaled Tags Per Million
Pig:139.3 nTPM
Mouse:221.1 nTPM
Allen mouse:1.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006757
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

857.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 440.9
2481 Female, age 94, left hemisphere 596.3
2290 Female, age 72, unknown 475.7
2289 Male, age 61, right hemisphere 467.9
2288 Male, age 75, left hemisphere 454.0
1854 Male, age 80, left hemisphere 426.9
1781 Male, age 74, unknown 385.5
1857 Female, age 85, left hemisphere 385.3
2846 Female, age 79, unknown 335.5
Globus pallidus, externus
nTPM: 857.6
2646 Male, age 61, right hemisphere 1079.4
1996 Male, age 80, right hemisphere 1000.7
2567 Female, age 72, unknown 908.1
2772 Female, age 79, unknown 765.2
2395 Male, age 75, both hemispheres 534.7
Globus pallidus, internus
nTPM: 784.9
2111 Female, age 85, right hemisphere 875.2
2037 Male, age 80, right hemisphere 860.4
2566 Female, age 72, unknown 807.7
2778 Female, age 91, both hemispheres 767.7
2483 Female, age 94, right hemisphere 746.7
2287 Male, age 75, right hemisphere 721.8
1818 Male, age 74, unknown 715.0
Nucleus accumbens
nTPM: 377.9
2391 Female, age 94, left hemisphere 494.2
2286 Male, age 75, left hemisphere 467.9
2698 Female, age 72, unknown 437.2
2732 Male, age 80, right hemisphere 408.4
1806 Female, age 85, left hemisphere 399.7
1783 Male, age 74, unknown 312.7
2824 Male, age 61, right hemisphere 297.0
1856 Female, age 91, right hemisphere 206.2
Nucleus basalis of Meynert
nTPM: 558.5
2569 Male, age 61, both hemispheres 1108.8
2484 Female, age 94, left hemisphere 416.7
2393 Male, age 80, right hemisphere 370.7
2821 Male, age 75, both hemispheres 337.7
Nucleus of the diagonal band
nTPM: 212.9
1812 Female, age 91, both hemispheres 246.9
1979 Male, age 74, unknown 235.3
2029 Male, age 61, right hemisphere 212.9
2775 Male, age 80, right hemisphere 197.1
2195 Female, age 85, both hemispheres 172.2
Putamen
nTPM: 382.4
2647 Male, age 75, left hemisphere 484.6
2482 Female, age 94, left hemisphere 451.0
2489 Female, age 72, unknown 437.8
1829 Male, age 74, unknown 413.2
2466 Female, age 79, unknown 314.7
1937 Female, age 91, right hemisphere 311.3
1838 Male, age 80, right hemisphere 264.4
Septal nuclei
nTPM: 252.9
2394 Male, age 61, left hemisphere 409.7
2199 Male, age 80, right hemisphere 361.4
2059 Female, age 85, both hemispheres 303.5
2031 Female, age 72, unknown 187.4
2629 Female, age 94, right hemisphere 175.7
2009 Female, age 91, both hemispheres 173.0
1960 Male, age 74, unknown 159.6
Stria terminalis, bed nucleus
nTPM: 251.0
2201 Male, age 74, unknown 357.0
1974 Female, age 91, both hemispheres 221.4
2486 Female, age 94, both hemispheres 174.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

693.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 579.9
Samples: 246

Max nTPM: 1441.3
Min nTPM: 100.0
Std nTPM: 262.4
Median nTPM: 534.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1441.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1417.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1324.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1307.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1307.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1263.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1260.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1219.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1178.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1172.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1081.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1080.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1073.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1060.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1041.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1014.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1008.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1004.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1003.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 998.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 988.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 970.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 955.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 942.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 933.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 928.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 924.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 924.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 908.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 900.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 894.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 884.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 878.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 865.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 863.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 857.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 849.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 846.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 845.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 834.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 831.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 818.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 817.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 812.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 809.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 807.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 803.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 791.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 791.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 783.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 781.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 780.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 780.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 771.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 765.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 763.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 763.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 742.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 742.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 739.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 736.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 732.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 731.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 721.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 717.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 714.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 709.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 705.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 704.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 702.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 701.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 696.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 690.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 689.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 689.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 688.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 686.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 686.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 680.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 674.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 671.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 670.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 667.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 662.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 660.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 652.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 651.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 650.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 635.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 635.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 634.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 632.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 630.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 627.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 626.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 626.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 622.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 620.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 616.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 613.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 612.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 612.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 611.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 611.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 606.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 602.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 598.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 587.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 570.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 567.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 566.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 559.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 559.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 556.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 554.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 553.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 553.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 551.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 549.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 542.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 538.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 537.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 536.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 532.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 532.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 531.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 528.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 517.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 516.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 504.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 491.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 488.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 484.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 478.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 477.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 476.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 474.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 471.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 470.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 468.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 466.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 462.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 459.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 456.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 455.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 454.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 454.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 453.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 453.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 452.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 449.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 446.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 446.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 446.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 445.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 444.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 443.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 442.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 442.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 439.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 438.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 434.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 433.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 430.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 430.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 427.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 426.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 424.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 423.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 422.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 421.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 419.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 416.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 414.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 412.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 412.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 405.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 404.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 399.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 398.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 394.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 388.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 387.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 385.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 383.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 381.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 375.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 374.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 372.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 362.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 362.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 359.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 359.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 358.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 355.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 349.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 348.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 347.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 344.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 339.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 339.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 335.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 330.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 329.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 326.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 325.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 325.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 322.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 318.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 317.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 316.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 307.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 305.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 303.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 299.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 293.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 293.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 291.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 291.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 290.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 287.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 285.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 285.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 285.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 282.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 276.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 274.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 267.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 266.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 263.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 263.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 262.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 260.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 255.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 245.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 245.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 245.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 245.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 231.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 224.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 224.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 221.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 178.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 161.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 100.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 100.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 442.7
Samples: 246

Max nTPM: 1638.5
Min nTPM: 121.0
Std nTPM: 259.0
Median nTPM: 355.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1638.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1478.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1303.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1278.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1256.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1209.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1107.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1096.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1056.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 998.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 971.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 946.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 945.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 937.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 932.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 928.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 924.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 914.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 863.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 846.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 846.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 846.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 814.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 790.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 789.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 779.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 777.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 776.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 775.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 764.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 762.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 755.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 749.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 749.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 740.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 734.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 697.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 676.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 670.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 668.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 667.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 664.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 664.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 660.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 658.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 655.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 649.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 640.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 626.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 622.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 622.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 607.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 603.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 591.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 589.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 584.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 577.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 570.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 568.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 567.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 564.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 557.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 551.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 543.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 538.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 536.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 522.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 522.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 516.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 513.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 510.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 505.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 503.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 502.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 500.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 496.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 493.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 488.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 480.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 479.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 469.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 468.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 459.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 459.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 457.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 447.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 435.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 433.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 433.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 431.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 431.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 430.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 428.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 426.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 418.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 416.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 415.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 412.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 411.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 408.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 408.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 399.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 397.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 392.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 391.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 390.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 389.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 383.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 382.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 380.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 375.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 374.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 373.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 373.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 372.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 369.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 369.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 366.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 362.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 360.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 357.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 356.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 355.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 354.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 351.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 348.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 348.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 347.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 346.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 343.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 342.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 341.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 340.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 339.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 339.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 338.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 337.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 336.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 334.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 331.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 331.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 330.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 327.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 325.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 325.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 325.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 323.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 321.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 321.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 319.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 319.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 313.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 313.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 310.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 309.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 309.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 306.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 301.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 300.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 299.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 299.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 297.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 297.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 295.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 295.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 291.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 290.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 289.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 287.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 285.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 284.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 281.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 281.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 280.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 278.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 278.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 277.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 274.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 273.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 273.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 271.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 270.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 269.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 269.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 268.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 268.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 266.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 265.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 263.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 263.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 261.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 259.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 259.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 255.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 254.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 251.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 248.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 243.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 241.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 240.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 239.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 238.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 238.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 237.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 237.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 235.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 235.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 233.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 231.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 224.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 223.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 221.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 218.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 214.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 213.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 212.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 212.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 202.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 202.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 200.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 199.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 197.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 195.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 194.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 192.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 188.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 188.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 188.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 187.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 187.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 181.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 181.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 180.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 179.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 178.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 172.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 169.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 163.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 161.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 159.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 151.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 147.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 142.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 141.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 130.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 121.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 693.6
Samples: 205

Max nTPM: 1997.0
Min nTPM: 185.1
Std nTPM: 318.6
Median nTPM: 633.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1997.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1771.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1675.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1569.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1528.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1451.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1405.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1368.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1306.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1302.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1268.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1259.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1254.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1230.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1212.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1201.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1174.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1165.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1149.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1149.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1141.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1102.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1094.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1083.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1047.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1045.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1039.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1038.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1030.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1030.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 993.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 983.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 981.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 981.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 978.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 975.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 965.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 963.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 942.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 934.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 927.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 923.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 908.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 905.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 904.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 904.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 903.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 903.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 892.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 889.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 888.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 870.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 867.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 862.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 858.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 854.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 853.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 849.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 849.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 846.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 838.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 837.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 836.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 829.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 822.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 818.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 816.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 793.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 791.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 789.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 764.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 762.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 760.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 743.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 735.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 733.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 733.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 729.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 728.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 722.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 720.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 715.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 714.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 711.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 709.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 707.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 706.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 706.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 704.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 693.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 693.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 690.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 682.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 675.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 673.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 670.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 668.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 665.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 651.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 650.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 645.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 644.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 633.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 631.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 629.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 627.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 616.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 611.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 611.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 609.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 609.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 605.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 602.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 585.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 584.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 583.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 578.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 571.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 565.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 559.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 557.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 554.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 552.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 546.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 545.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 540.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 537.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 535.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 527.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 518.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 514.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 513.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 512.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 510.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 509.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 509.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 508.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 505.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 504.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 501.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 494.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 492.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 491.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 484.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 483.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 473.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 473.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 460.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 459.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 459.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 458.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 449.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 444.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 444.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 443.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 443.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 441.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 435.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 433.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 432.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 430.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 430.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 420.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 414.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 414.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 412.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 408.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 407.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 399.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 398.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 398.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 398.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 396.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 395.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 394.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 390.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 390.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 381.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 379.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 378.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 373.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 368.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 361.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 360.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 359.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 350.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 349.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 340.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 331.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 320.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 316.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 308.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 302.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 301.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 297.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 295.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 291.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 282.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 254.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 252.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 238.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 238.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 216.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 188.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 185.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

657.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 378.1
FF:10164-103B2 76 years, female 378.1
Nucleus accumbens
Scaled Tags Per Million: 426.2
FF:10037-101F1 23-56 years, mixed 426.2
Putamen
Scaled Tags Per Million: 341.2
FF:10176-103C5 60 years, female 341.2
Globus pallidus
Scaled Tags Per Million: 657.1
FF:10175-103C4 60 years, female 743.1
FF:10161-103A8 76 years, female 571.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.3
Pig sample Sample description nTPM
Caudate
nTPM: 81.4
Samples: 4

Max nTPM: 92.5
Min nTPM: 66.1
Sample A Female 66.1
Sample B Female 92.5
Sample C Male 91.1
Sample D Male 75.9
Putamen
nTPM: 139.3
Samples: 4

Max nTPM: 186.1
Min nTPM: 88.7
Sample A Female 186.1
Sample B Female 88.7
Sample C Male 134.4
Sample D Male 148.0
Septum
nTPM: 87.5
Samples: 4

Max nTPM: 96.6
Min nTPM: 80.9
Sample A Female 87.0
Sample B Female 80.9
Sample C Male 85.6
Sample D Male 96.6
Ventral pallidum
nTPM: 115.2
Samples: 4

Max nTPM: 146.9
Min nTPM: 63.1
Sample A Female 63.1
Sample B Female 123.8
Sample C Male 146.9
Sample D Male 126.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

221.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 195.8
Samples: 4

Max nTPM: 252.1
Min nTPM: 164.2
Sample A Male 197.3
Sample B Male 252.1
Sample C Female 164.2
Sample D Female 169.4
Septum
nTPM: 221.1
Samples: 4

Max nTPM: 257.1
Min nTPM: 186.7
Sample A Male 186.7
Sample B Male 218.9
Sample C Female 257.1
Sample D Female 221.5
Ventral forebrain
nTPM: 189.7
Samples: 4

Max nTPM: 275.3
Min nTPM: 145.6
Sample A Male 183.6
Sample B Male 145.6
Sample C Female 275.3
Sample D Female 154.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.6
1465 Antisense, RP_040420_01_D05, Mouse strain C57BL/6J (56 days, male) 3.1
1464 Antisense, RP_040420_01_D05, Mouse strain C57BL/6J (56 days, male) 2.0
74581363 Antisense, RP_060215_03_B02, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 1.9
1465 Antisense, RP_040420_01_D05, Mouse strain C57BL/6J (56 days, male) 3.9
1464 Antisense, RP_040420_01_D05, Mouse strain C57BL/6J (56 days, male) 2.9
74581363 Antisense, RP_060215_03_B02, Mouse strain C57BL/6J (56 days, male) 0.0

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