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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:236.9 nTPM
GTEx:236.9 nTPM
FANTOM5:508.5 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047224Antibody HPA058546Antibody CAB008630
Squamous epithelial cells Not detectedNot detectedLow





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

236.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 236.9
Samples: 156

Max nTPM: 505.0
Min nTPM: 85.7
Std nTPM: 73.2
Median nTPM: 232.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 505.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 435.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 418.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 414.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 404.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 397.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 383.7
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 377.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 374.8
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 349.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 346.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 343.6
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 343.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 343.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 342.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 339.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 336.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 335.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 334.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 318.6
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 318.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 316.9
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 308.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 305.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 304.2
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 303.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 302.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 300.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 300.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 299.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 298.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 296.8
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 296.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 286.0
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 279.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 278.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 278.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 278.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 278.3
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 274.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 274.3
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 272.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 271.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 269.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 269.3
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 269.1
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 268.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 267.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 260.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 260.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 259.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 257.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 255.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 255.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 254.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 253.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 250.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 250.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 249.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 249.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 248.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 247.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 244.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 244.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 242.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 242.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 242.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 242.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 241.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 241.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 240.2
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 239.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 239.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 236.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 235.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 234.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 234.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 233.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 232.3
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 229.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 228.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 228.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 225.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 224.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 223.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 223.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 223.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 223.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 221.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 219.7
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 217.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 217.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 217.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 214.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 213.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 213.2
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 211.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 211.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 209.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 208.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 208.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 207.2
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 206.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 206.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 205.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 204.8
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 203.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 203.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 200.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 199.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 198.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 192.4
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 188.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 187.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 186.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 184.2
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 184.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 183.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 181.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 180.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 179.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 175.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 174.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 172.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 169.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 169.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 166.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 166.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 165.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 160.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 157.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 157.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 156.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 154.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 153.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 153.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 152.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 152.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 152.0
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 151.7
GTEX-QCQG-1226-SM-48U23 50-59 years, female 149.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 148.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 147.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 146.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 145.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 145.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 142.1
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 137.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 136.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 135.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 117.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 116.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 113.7
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 106.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 102.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 85.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

508.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 508.5
FF:10204-103F6 68 years, female 508.5

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