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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:5598.0 nTPM
FANTOM5:137.8 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5598.0
Sample id Sample description nTPM
Area postrema
nTPM: 4760.8
2799 Male, age 61, both hemispheres 5837.9
2306 Male, age 80, both hemispheres 5609.0
2054 Male, age 76, both hemispheres 2835.4
Dorsal medullary reticular nucleus
nTPM: 3417.5
2373 Male, age 61, both hemispheres 3978.9
2088 Male, age 76, both hemispheres 3155.5
2040 Female, age 85, both hemispheres 3118.0
Dorsal motor vagal complex
nTPM: 3963.4
2643 Male, age 74, both hemispheres 4994.4
2797 Male, age 61, both hemispheres 4892.2
2185 Male, age 76, both hemispheres 4276.6
2807 Female, age 85, both hemispheres 3766.1
2844 Male, age 55, unknown 3752.1
2133 Female, age 91, both hemispheres 3622.2
2000 Male, age 74, unknown 3388.5
2813 Female, age 72, unknown 3014.9
Gigantocellular reticular nuclei, medullary
nTPM: 3964.9
2314 Male, age 61, both hemispheres 6062.1
2310 Male, age 80, both hemispheres 4430.0
2387 Female, age 91, both hemispheres 3850.0
2462 Male, age 74, both hemispheres 3715.3
1876 Female, age 85, both hemispheres 3209.9
2022 Male, age 76, right hemisphere 2522.0
Gigantocellular reticular nuclei, pars
nTPM: 4007.4
2706 Male, age 80, both hemispheres 4581.8
2330 Male, age 80, both hemispheres 4559.9
2336 Male, age 61, both hemispheres 4076.3
2084 Female, age 85, both hemispheres 3534.8
2168 Male, age 76, both hemispheres 3284.1
Inferior olive
nTPM: 5197.7
2178 Male, age 61, both hemispheres 5667.0
2628 Female, age 91, both hemispheres 5649.2
2563 Male, age 74, both hemispheres 5304.6
2085 Female, age 85, both hemispheres 5151.4
2379 Male, age 80, both hemispheres 4216.2
Lateral medullary reticular nucleus
nTPM: 4576.2
2852 Male, age 80, both hemispheres 5331.8
2804 Female, age 91, both hemispheres 5126.4
2374 Male, age 61, both hemispheres 4644.3
2190 Female, age 85, both hemispheres 4546.3
2305 Male, age 74, both hemispheres 4050.0
2044 Male, age 76, both hemispheres 3758.5
Medial olivary nucleus
nTPM: 4942.1
1943 Male, age 61, both hemispheres 5941.2
2851 Male, age 80, both hemispheres 5035.2
1962 Male, age 76, both hemispheres 4732.5
2138 Female, age 91, both hemispheres 4059.7
Medial vestibular nucleus
nTPM: 4092.6
2624 Male, age 61, both hemispheres 5787.3
2803 Female, age 91, both hemispheres 4556.5
2093 Male, age 80, both hemispheres 4018.0
2801 Male, age 74, both hemispheres 3793.0
2134 Male, age 76, both hemispheres 3378.4
2743 Female, age 85, both hemispheres 3022.4
Motor hypoglossal nucleus
nTPM: 3451.2
2182 Male, age 80, both hemispheres 4762.4
2125 Female, age 91, both hemispheres 4619.5
2132 Female, age 85, both hemispheres 4591.0
2277 Male, age 76, both hemispheres 2340.1
2461 Male, age 61, both hemispheres 943.0
Nucleus ambiguus
nTPM: 3808.5
2071 Male, age 76, both hemispheres 4678.2
2096 Female, age 85, both hemispheres 2938.9
Nucleus cuneatus
nTPM: 4213.7
2805 Female, age 91, both hemispheres 5081.4
2808 Female, age 85, both hemispheres 4959.5
2564 Male, age 74, both hemispheres 4526.6
2380 Male, age 80, both hemispheres 4318.7
2381 Male, age 80, both hemispheres 4303.9
2376 Male, age 61, both hemispheres 3859.2
2100 Male, age 76, both hemispheres 3760.6
2562 Male, age 61, both hemispheres 3662.8
2131 Male, age 76, both hemispheres 3450.9
Nucleus gracilis
nTPM: 4882.4
2382 Male, age 80, both hemispheres 5263.9
2627 Male, age 74, both hemispheres 4735.2
2299 Female, age 85, both hemispheres 4648.1
Nucleus raphe obscurus
nTPM: 5042.9
2845 Female, age 85, midline 5180.6
2142 Male, age 76, midline 5171.5
2800 Male, age 61, midline 4776.6
Nucleus raphe pallidus
nTPM: 5598.0
1924 Male, age 61, midline 7749.1
2145 Male, age 76, midline 4535.7
2183 Male, age 80, midline 4509.2
Nucleus tractus solitarii
nTPM: 2855.5
2191 Female, age 85, both hemispheres 3479.5
2307 Male, age 80, both hemispheres 3113.2
2656 Male, age 76, both hemispheres 2463.0
2144 Female, age 91, right hemisphere 2366.3
Parvicellular reticular nuclei
nTPM: 4244.9
2095 Male, age 76, both hemispheres 4445.8
2558 Male, age 74, both hemispheres 4291.1
2119 Male, age 80, both hemispheres 3997.8
Parvicellular reticular nuclei, medullary
nTPM: 3658.0
2189 Female, age 91, both hemispheres 4011.7
2181 Male, age 80, left hemisphere 3588.5
2091 Female, age 85, both hemispheres 3373.7
Peritrigeminal nucleus
nTPM: 4729.3
2136 Male, age 76, both hemispheres 5309.6
2067 Female, age 85, both hemispheres 4679.1
2179 Male, age 61, both hemispheres 4199.4
Prepositus hypoglossal nucleus
nTPM: 3675.7
2855 Female, age 85, right hemisphere 3979.6
2086 Male, age 80, both hemispheres 3371.7
Spinal trigeminal nucleus, caudal
nTPM: 4213.7
2308 Male, age 80, both hemispheres 5024.9
2642 Male, age 74, both hemispheres 4395.6
2312 Male, age 61, both hemispheres 4313.1
2390 Female, age 91, both hemispheres 3930.2
2447 Male, age 76, both hemispheres 3404.9
Spinal trigeminal nucleus, interpolar
nTPM: 3861.3
2625 Male, age 61, both hemispheres 4954.9
2389 Female, age 91, both hemispheres 4000.8
2066 Male, age 76, right hemisphere 3673.5
2033 Male, age 80, both hemispheres 3487.7
2386 Female, age 85, both hemispheres 3189.6
Spinal vestibular nucleus
nTPM: 4091.4
2796 Male, age 61, both hemispheres 4823.2
2384 Male, age 74, both hemispheres 4024.0
2806 Female, age 85, both hemispheres 3972.8
2748 Male, age 76, both hemispheres 3944.9
2780 Male, age 80, both hemispheres 3899.7
2186 Female, age 91, both hemispheres 3884.0
Superior vestibular nucleus
nTPM: 3377.1
2061 Male, age 76, both hemispheres 3720.9
2015 Male, age 80, both hemispheres 3364.2
2383 Male, age 74, both hemispheres 3046.2
Ventral medullary reticular nucleus
nTPM: 3765.7
2372 Male, age 61, both hemispheres 4167.9
2060 Male, age 76, both hemispheres 3363.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 4756.3
2302 Female, age 91, both hemispheres 5294.9
2118 Male, age 80, both hemispheres 5028.0
2180 Male, age 61, both hemispheres 4985.4
1986 Male, age 76, both hemispheres 4538.4
2741 Female, age 85, both hemispheres 3934.6

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

137.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 137.8
FF:10174-103C3 60 years, female 193.2
FF:10155-103A2 76 years, female 118.8
FF:10038-101F2 18-64 years, mixed 101.5

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